RNA–Protein interactions for RNA: ENST00000552054.1

TBX3-204, Transcript of T-box 3, humanhuman

TSL 2

Gene TBX3, Length 1,814 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBX3-204ENST00000552054 NISCHQ9Y2I1 1504 aa34.09■■■■□ 3.05
TBX3-204ENST00000552054 CCDC180Q9P1Z9 1646 aa30.15■■■□□ 2.42
TBX3-204ENST00000552054 ABCC9O60706 1549 aa29.49■■■□□ 2.31
TBX3-204ENST00000552054 DCAF8L2P0C7V8 631 aa28.49■■■□□ 2.15
TBX3-204ENST00000552054 ZCCHC6Q5VYS8 1495 aaKnown RBP28.43■■■□□ 2.14
TBX3-204ENST00000552054 RB1CC1Q8TDY2 1594 aa28.31■■■□□ 2.12
TBX3-204ENST00000552054 NACADO15069 1562 aa28.3■■■□□ 2.12
TBX3-204ENST00000552054 MYO15BQ96JP2 1530 aa28.14■■■□□ 2.09
TBX3-204ENST00000552054 DCAF1Q9Y4B6 1507 aa28.11■■■□□ 2.09
TBX3-204ENST00000552054 UNC13AQ9UPW8 1703 aa27.8■■■□□ 2.04
TBX3-204ENST00000552054 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
TBX3-204ENST00000552054 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
TBX3-204ENST00000552054 BICRAQ9NZM4 1560 aa27.57■■■□□ 2
TBX3-204ENST00000552054 SHROOM4Q9ULL8 1493 aa27.18■■□□□ 1.94
TBX3-204ENST00000552054 DNAJC5BQ9UF47 199 aa27.01■■□□□ 1.91
TBX3-204ENST00000552054 EIF4G1Q04637 1599 aaKnown RBP26.77■■□□□ 1.88
TBX3-204ENST00000552054 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
TBX3-204ENST00000552054 CC2D2AQ9P2K1 1620 aa26.65■■□□□ 1.86
TBX3-204ENST00000552054 CECR2Q9BXF3 1484 aa26.64■■□□□ 1.85
TBX3-204ENST00000552054 SMARCA4P51532 1647 aa26.42■■□□□ 1.82
TBX3-204ENST00000552054 BAZ1AQ9NRL2 1556 aaPredicted RBP26.36■■□□□ 1.81
TBX3-204ENST00000552054 MROH2BQ7Z745 1585 aa26.34■■□□□ 1.81
TBX3-204ENST00000552054 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
TBX3-204ENST00000552054 SUPT5HO00267 1087 aaKnown RBP26.23■■□□□ 1.79
TBX3-204ENST00000552054 NCAPD3P42695 1498 aa26.14■■□□□ 1.78
TBX3-204ENST00000552054 SMARCA2P51531 1590 aa26.13■■□□□ 1.77
TBX3-204ENST00000552054 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
TBX3-204ENST00000552054 WIZO95785 1651 aa26.08■■□□□ 1.77
TBX3-204ENST00000552054 RSF1Q96T23 1441 aaPredicted RBP26.07■■□□□ 1.76
TBX3-204ENST00000552054 HMGXB3Q12766 1538 aa26.01■■□□□ 1.75
TBX3-204ENST00000552054 BAZ1BQ9UIG0 1483 aaKnown RBP26■■□□□ 1.75
TBX3-204ENST00000552054 TOP2AP11388 1531 aaKnown RBP25.72■■□□□ 1.71
TBX3-204ENST00000552054 NESP48681 1621 aa25.61■■□□□ 1.69
TBX3-204ENST00000552054 CCDC88BA6NC98 1476 aa25.48■■□□□ 1.67
TBX3-204ENST00000552054 CADPSQ9ULU8 1353 aa25.41■■□□□ 1.66
TBX3-204ENST00000552054 LAMC3Q9Y6N6 1575 aa25.4■■□□□ 1.66
TBX3-204ENST00000552054 ERCC6Q03468 1493 aa25.32■■□□□ 1.64
TBX3-204ENST00000552054 CFTRP13569 1480 aa25.3■■□□□ 1.64
TBX3-204ENST00000552054 KIF21AQ7Z4S6 1674 aa25.27■■□□□ 1.64
TBX3-204ENST00000552054 PDS5BQ9NTI5 1447 aa25.22■■□□□ 1.63
TBX3-204ENST00000552054 FANCD2Q9BXW9 1451 aa25.14■■□□□ 1.62
TBX3-204ENST00000552054 THOC2Q8NI27 1593 aaKnown RBP25.11■■□□□ 1.61
TBX3-204ENST00000552054 PRDM2Q13029 1718 aa25.1■■□□□ 1.61
TBX3-204ENST00000552054 AEBP2Q6ZN18 517 aaPredicted RBP25.09■■□□□ 1.61
TBX3-204ENST00000552054 CEP164Q9UPV0 1460 aa25.06■■□□□ 1.6
TBX3-204ENST00000552054 HRCP23327 699 aa25.01■■□□□ 1.59
TBX3-204ENST00000552054 MRC2Q9UBG0 1479 aa25■■□□□ 1.59
TBX3-204ENST00000552054 SLC24A1O60721 1099 aa24.93■■□□□ 1.58
TBX3-204ENST00000552054 URB2Q14146 1524 aaKnown RBP24.93■■□□□ 1.58
TBX3-204ENST00000552054 CUX2O14529 1486 aa24.92■■□□□ 1.58
TBX3-204ENST00000552054 WDR62O43379 1518 aa24.91■■□□□ 1.58
TBX3-204ENST00000552054 PCGF6Q9BYE7 350 aa24.79■■□□□ 1.56
TBX3-204ENST00000552054 LOC105371045A0A1W2PR82 267 aa24.77■■□□□ 1.56
TBX3-204ENST00000552054 TOPBP1Q92547 1522 aa24.77■■□□□ 1.56
TBX3-204ENST00000552054 DNMBPQ6XZF7 1577 aa24.72■■□□□ 1.55
TBX3-204ENST00000552054 CUX1P39880 1505 aa24.69■■□□□ 1.54
TBX3-204ENST00000552054 ABCC8Q09428 1581 aa24.66■■□□□ 1.54
TBX3-204ENST00000552054 POLA1P09884 1462 aaPredicted RBP24.58■■□□□ 1.53
TBX3-204ENST00000552054 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
TBX3-204ENST00000552054 FGD5Q6ZNL6 1462 aa24.55■■□□□ 1.52
TBX3-204ENST00000552054 SYNJ1O43426 1573 aa24.55■■□□□ 1.52
TBX3-204ENST00000552054 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
TBX3-204ENST00000552054 WRNQ14191 1432 aaPredicted RBP eCLIP24.53■■□□□ 1.52
TBX3-204ENST00000552054 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
TBX3-204ENST00000552054 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
TBX3-204ENST00000552054 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
TBX3-204ENST00000552054 TRIM26Q12899 539 aaPredicted RBP24.5■■□□□ 1.51
TBX3-204ENST00000552054 SOGA1O94964 1423 aa24.46■■□□□ 1.51
TBX3-204ENST00000552054 TOP2BQ02880 1626 aa24.46■■□□□ 1.51
TBX3-204ENST00000552054 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
TBX3-204ENST00000552054 AQRO60306 1485 aaKnown RBP eCLIP24.38■■□□□ 1.49
TBX3-204ENST00000552054 EIF4G3O43432 1585 aaKnown RBP24.37■■□□□ 1.49
TBX3-204ENST00000552054 TDRD9Q8NDG6 1382 aaKnown RBP24.36■■□□□ 1.49
TBX3-204ENST00000552054 WDR97A6NE52 1622 aa24.34■■□□□ 1.49
TBX3-204ENST00000552054 ABCA10Q8WWZ4 1543 aa24.28■■□□□ 1.48
TBX3-204ENST00000552054 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
TBX3-204ENST00000552054 EHMT2Q96KQ7 1210 aa24.21■■□□□ 1.47
TBX3-204ENST00000552054 ABCA5Q8WWZ7 1642 aa24.2■■□□□ 1.46
TBX3-204ENST00000552054 GAPVD1Q14C86 1478 aa24.17■■□□□ 1.46
TBX3-204ENST00000552054 FAM9AQ8IZU1 332 aaPredicted RBP24.17■■□□□ 1.46
TBX3-204ENST00000552054 PBRM1Q86U86 1689 aa24.14■■□□□ 1.45
TBX3-204ENST00000552054 SNAPC4Q5SXM2 1469 aa24.13■■□□□ 1.45
TBX3-204ENST00000552054 GRIN2BQ13224 1484 aa24.12■■□□□ 1.45
TBX3-204ENST00000552054 ZEB1P37275 1124 aaPredicted RBP24.07■■□□□ 1.44
TBX3-204ENST00000552054 CHD1O14646 1710 aa24.05■■□□□ 1.44
TBX3-204ENST00000552054 DNAJC5Q9H3Z4 198 aa24.04■■□□□ 1.44
TBX3-204ENST00000552054 FBLN2P98095 1184 aa24.03■■□□□ 1.44
TBX3-204ENST00000552054 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
TBX3-204ENST00000552054 RUSC2Q8N2Y8 1516 aa23.99■■□□□ 1.43
TBX3-204ENST00000552054 KIF27Q86VH2 1401 aa23.97■■□□□ 1.43
TBX3-204ENST00000552054 OSCARQ8IYS5 282 aa23.96■■□□□ 1.43
TBX3-204ENST00000552054 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.43
TBX3-204ENST00000552054 ADAMTS12P58397 1594 aa23.95■■□□□ 1.42
TBX3-204ENST00000552054 SYNJ2O15056 1496 aa23.94■■□□□ 1.42
TBX3-204ENST00000552054 CHMP7Q8WUX9 453 aaPredicted RBP23.94■■□□□ 1.42
TBX3-204ENST00000552054 IGF1RP08069 1367 aa23.92■■□□□ 1.42
TBX3-204ENST00000552054 FHAD1B1AJZ9 1412 aa23.87■■□□□ 1.41
TBX3-204ENST00000552054 PHF23Q9BUL5 403 aaPredicted RBP23.87■■□□□ 1.41
TBX3-204ENST00000552054 GRIN2AQ12879 1464 aa23.84■■□□□ 1.41
TBX3-204ENST00000552054 EEA1Q15075 1411 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms