RNA–Protein interactions for RNA: ENST00000551650.1

AC012555.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012555.1, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012555.1-201ENST00000551650 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
AC012555.1-201ENST00000551650 CCDC180Q9P1Z9 1646 aa24.97■■□□□ 1.59
AC012555.1-201ENST00000551650 ABCC9O60706 1549 aa24.84■■□□□ 1.57
AC012555.1-201ENST00000551650 RB1CC1Q8TDY2 1594 aa23.69■■□□□ 1.38
AC012555.1-201ENST00000551650 NACADO15069 1562 aa23.56■■□□□ 1.36
AC012555.1-201ENST00000551650 DCAF8L2P0C7V8 631 aa23.33■■□□□ 1.33
AC012555.1-201ENST00000551650 MYO15BQ96JP2 1530 aa23.27■■□□□ 1.32
AC012555.1-201ENST00000551650 UNC13AQ9UPW8 1703 aa23.23■■□□□ 1.31
AC012555.1-201ENST00000551650 DNAJC5BQ9UF47 199 aa23.21■■□□□ 1.31
AC012555.1-201ENST00000551650 PABPN1Q86U42 306 aaKnown RBP eCLIP23.1■■□□□ 1.29
AC012555.1-201ENST00000551650 ZCCHC6Q5VYS8 1495 aaKnown RBP23.1■■□□□ 1.29
AC012555.1-201ENST00000551650 BICRAQ9NZM4 1560 aa23.04■■□□□ 1.28
AC012555.1-201ENST00000551650 DCAF1Q9Y4B6 1507 aa23■■□□□ 1.27
AC012555.1-201ENST00000551650 SCRIBQ14160 1630 aa22.74■■□□□ 1.23
AC012555.1-201ENST00000551650 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
AC012555.1-201ENST00000551650 CC2D2AQ9P2K1 1620 aa22.48■■□□□ 1.19
AC012555.1-201ENST00000551650 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
AC012555.1-201ENST00000551650 CECR2Q9BXF3 1484 aa22.37■■□□□ 1.17
AC012555.1-201ENST00000551650 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
AC012555.1-201ENST00000551650 SMARCA4P51532 1647 aa21.71■■□□□ 1.07
AC012555.1-201ENST00000551650 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
AC012555.1-201ENST00000551650 SMARCA2P51531 1590 aa21.63■■□□□ 1.05
AC012555.1-201ENST00000551650 HMGXB3Q12766 1538 aa21.61■■□□□ 1.05
AC012555.1-201ENST00000551650 BAZ1AQ9NRL2 1556 aaPredicted RBP21.59■■□□□ 1.05
AC012555.1-201ENST00000551650 PEG3Q9GZU2 1588 aa21.51■■□□□ 1.03
AC012555.1-201ENST00000551650 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
AC012555.1-201ENST00000551650 MROH2BQ7Z745 1585 aa21.44■■□□□ 1.02
AC012555.1-201ENST00000551650 ERCC6Q03468 1493 aa21.43■■□□□ 1.02
AC012555.1-201ENST00000551650 CUX2O14529 1486 aa21.39■■□□□ 1.02
AC012555.1-201ENST00000551650 NESP48681 1621 aa21.37■■□□□ 1.01
AC012555.1-201ENST00000551650 LAMC3Q9Y6N6 1575 aa21.26■□□□□ 0.99
AC012555.1-201ENST00000551650 DNAJC5Q9H3Z4 198 aa21.25■□□□□ 0.99
AC012555.1-201ENST00000551650 WIZO95785 1651 aa21.2■□□□□ 0.98
AC012555.1-201ENST00000551650 THOC2Q8NI27 1593 aaKnown RBP21.19■□□□□ 0.98
AC012555.1-201ENST00000551650 KIF21AQ7Z4S6 1674 aa21.15■□□□□ 0.98
AC012555.1-201ENST00000551650 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.97
AC012555.1-201ENST00000551650 CADPSQ9ULU8 1353 aa21.05■□□□□ 0.96
AC012555.1-201ENST00000551650 RSF1Q96T23 1441 aaPredicted RBP21■□□□□ 0.95
AC012555.1-201ENST00000551650 TOP2AP11388 1531 aaKnown RBP20.93■□□□□ 0.94
AC012555.1-201ENST00000551650 MRC2Q9UBG0 1479 aa20.92■□□□□ 0.94
AC012555.1-201ENST00000551650 WDR62O43379 1518 aa20.9■□□□□ 0.94
AC012555.1-201ENST00000551650 CFTRP13569 1480 aa20.86■□□□□ 0.93
AC012555.1-201ENST00000551650 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
AC012555.1-201ENST00000551650 FANCD2Q9BXW9 1451 aa20.83■□□□□ 0.93
AC012555.1-201ENST00000551650 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
AC012555.1-201ENST00000551650 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
AC012555.1-201ENST00000551650 CCDC88BA6NC98 1476 aa20.67■□□□□ 0.9
AC012555.1-201ENST00000551650 TOPBP1Q92547 1522 aa20.46■□□□□ 0.87
AC012555.1-201ENST00000551650 IFT140Q96RY7 1462 aa20.43■□□□□ 0.86
AC012555.1-201ENST00000551650 DNMBPQ6XZF7 1577 aa20.4■□□□□ 0.86
AC012555.1-201ENST00000551650 ZNF608Q9ULD9 1512 aaPredicted RBP20.4■□□□□ 0.86
AC012555.1-201ENST00000551650 ABCC8Q09428 1581 aa20.39■□□□□ 0.85
AC012555.1-201ENST00000551650 OSCARQ8IYS5 282 aa20.36■□□□□ 0.85
AC012555.1-201ENST00000551650 TRIM41Q8WV44 630 aa20.33■□□□□ 0.85
AC012555.1-201ENST00000551650 EIF4G3O43432 1585 aaKnown RBP20.33■□□□□ 0.84
AC012555.1-201ENST00000551650 TARBP1Q13395 1621 aaKnown RBP20.31■□□□□ 0.84
AC012555.1-201ENST00000551650 POLA1P09884 1462 aaPredicted RBP20.26■□□□□ 0.83
AC012555.1-201ENST00000551650 AQRO60306 1485 aaKnown RBP eCLIP20.2■□□□□ 0.82
AC012555.1-201ENST00000551650 RIMBP3CA6NJZ7 1639 aa20.17■□□□□ 0.82
AC012555.1-201ENST00000551650 RIMBP3BA6NNM3 1639 aa20.17■□□□□ 0.82
AC012555.1-201ENST00000551650 RIMBP3Q9UFD9 1639 aa20.17■□□□□ 0.82
AC012555.1-201ENST00000551650 RAD54L2Q9Y4B4 1467 aa20.17■□□□□ 0.82
AC012555.1-201ENST00000551650 CHD1O14646 1710 aa20.16■□□□□ 0.82
AC012555.1-201ENST00000551650 CUX1P39880 1505 aa20.15■□□□□ 0.82
AC012555.1-201ENST00000551650 FGD5Q6ZNL6 1462 aa20.14■□□□□ 0.81
AC012555.1-201ENST00000551650 SOGA1O94964 1423 aa20.12■□□□□ 0.81
AC012555.1-201ENST00000551650 ARHGEF11O15085 1522 aa20.11■□□□□ 0.81
AC012555.1-201ENST00000551650 WDR97A6NE52 1622 aa20.09■□□□□ 0.81
AC012555.1-201ENST00000551650 TDRD9Q8NDG6 1382 aaKnown RBP20.07■□□□□ 0.8
AC012555.1-201ENST00000551650 SUPT5HO00267 1087 aaKnown RBP20.05■□□□□ 0.8
AC012555.1-201ENST00000551650 SNAPC4Q5SXM2 1469 aa20.02■□□□□ 0.8
AC012555.1-201ENST00000551650 FBLN2P98095 1184 aa19.99■□□□□ 0.79
AC012555.1-201ENST00000551650 MAGI1Q96QZ7 1491 aaPredicted RBP19.98■□□□□ 0.79
AC012555.1-201ENST00000551650 GRIN2BQ13224 1484 aa19.96■□□□□ 0.79
AC012555.1-201ENST00000551650 PBRM1Q86U86 1689 aa19.95■□□□□ 0.78
AC012555.1-201ENST00000551650 CLASP1Q7Z460 1538 aa19.93■□□□□ 0.78
AC012555.1-201ENST00000551650 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
AC012555.1-201ENST00000551650 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
AC012555.1-201ENST00000551650 ABCA5Q8WWZ7 1642 aa19.91■□□□□ 0.78
AC012555.1-201ENST00000551650 GAPVD1Q14C86 1478 aa19.91■□□□□ 0.78
AC012555.1-201ENST00000551650 SYNJ2O15056 1496 aa19.9■□□□□ 0.78
AC012555.1-201ENST00000551650 SYNJ1O43426 1573 aa19.9■□□□□ 0.78
AC012555.1-201ENST00000551650 CYB5RLQ6IPT4 315 aa19.88■□□□□ 0.77
AC012555.1-201ENST00000551650 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
AC012555.1-201ENST00000551650 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
AC012555.1-201ENST00000551650 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
AC012555.1-201ENST00000551650 WRNQ14191 1432 aaPredicted RBP eCLIP19.82■□□□□ 0.76
AC012555.1-201ENST00000551650 ADAMTS12P58397 1594 aa19.75■□□□□ 0.75
AC012555.1-201ENST00000551650 GRIN2AQ12879 1464 aa19.73■□□□□ 0.75
AC012555.1-201ENST00000551650 ERICH3Q5RHP9 1530 aa19.67■□□□□ 0.74
AC012555.1-201ENST00000551650 CEP170Q5SW79 1584 aa19.67■□□□□ 0.74
AC012555.1-201ENST00000551650 NUP160Q12769 1436 aa19.66■□□□□ 0.74
AC012555.1-201ENST00000551650 FHAD1B1AJZ9 1412 aa19.65■□□□□ 0.74
AC012555.1-201ENST00000551650 ERCC6L2Q5T890 1561 aa19.61■□□□□ 0.73
AC012555.1-201ENST00000551650 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
AC012555.1-201ENST00000551650 SHROOM2Q13796 1616 aa19.59■□□□□ 0.73
AC012555.1-201ENST00000551650 RUSC2Q8N2Y8 1516 aa19.49■□□□□ 0.71
AC012555.1-201ENST00000551650 PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
AC012555.1-201ENST00000551650 CUL7Q14999 1698 aa19.42■□□□□ 0.7
AC012555.1-201ENST00000551650 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 247.8 ms