RNA–Protein interactions for RNA: ENST00000551517.5

ACTR6-208, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 3

Gene ACTR6, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-208ENST00000551517 AEBP2Q6ZN18 517 aaPredicted RBP23.08■■□□□ 1.29
ACTR6-208ENST00000551517 CHIC1Q5VXU3 224 aa21.79■■□□□ 1.08
ACTR6-208ENST00000551517 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
ACTR6-208ENST00000551517 PHF23Q9BUL5 403 aaPredicted RBP19.43■□□□□ 0.7
ACTR6-208ENST00000551517 FOXD1Q16676 465 aa18.37■□□□□ 0.53
ACTR6-208ENST00000551517 PLPPR3Q6T4P5 718 aa17.36■□□□□ 0.37
ACTR6-208ENST00000551517 MSH5O43196 834 aa17.16■□□□□ 0.34
ACTR6-208ENST00000551517 PIAS4Q8N2W9 510 aaPredicted RBP17.15■□□□□ 0.34
ACTR6-208ENST00000551517 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
ACTR6-208ENST00000551517 ADRA2BP18089 450 aa17.1■□□□□ 0.33
ACTR6-208ENST00000551517 POTEDQ86YR6 584 aa16.96■□□□□ 0.31
ACTR6-208ENST00000551517 MAPK8IP2Q13387 824 aaPredicted RBP15.75■□□□□ 0.11
ACTR6-208ENST00000551517 DMRT2Q9Y5R5 561 aa15.57■□□□□ 0.08
ACTR6-208ENST00000551517 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
ACTR6-208ENST00000551517 PPP4R3CPQ6ZMV5 832 aa15.25■□□□□ 0.03
ACTR6-208ENST00000551517 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
ACTR6-208ENST00000551517 HOXD11P31277 338 aaPredicted RBP14.95□□□□□ -0.02
ACTR6-208ENST00000551517 CNKSR2Q8WXI2 1034 aa14.95□□□□□ -0.02
ACTR6-208ENST00000551517 CACNB1Q02641 598 aaPredicted RBP14.86□□□□□ -0.03
ACTR6-208ENST00000551517 RNF216Q9NWF9 866 aaPredicted RBP14.82□□□□□ -0.04
ACTR6-208ENST00000551517 RNF39Q9H2S5 420 aa14.66□□□□□ -0.06
ACTR6-208ENST00000551517 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
ACTR6-208ENST00000551517 NPM3O75607 178 aaKnown RBP14.42□□□□□ -0.1
ACTR6-208ENST00000551517 C1QBPQ07021 282 aaKnown RBP14.42□□□□□ -0.1
ACTR6-208ENST00000551517 DNAJC5BQ9UF47 199 aa14.37□□□□□ -0.11
ACTR6-208ENST00000551517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.31□□□□□ -0.12
ACTR6-208ENST00000551517 KCNA4P22459 653 aa14.09□□□□□ -0.15
ACTR6-208ENST00000551517 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
ACTR6-208ENST00000551517 SPINK5Q9NQ38 1064 aaPredicted RBP13.84□□□□□ -0.19
ACTR6-208ENST00000551517 CAPN15O75808 1086 aa13.82□□□□□ -0.2
ACTR6-208ENST00000551517 SLC4A2P04920 1241 aa13.8□□□□□ -0.2
ACTR6-208ENST00000551517 DSG3P32926 999 aa13.72□□□□□ -0.21
ACTR6-208ENST00000551517 TRHP20396 242 aaPredicted RBP13.59□□□□□ -0.23
ACTR6-208ENST00000551517 ABCB7O75027 752 aa13.52□□□□□ -0.25
ACTR6-208ENST00000551517 APLP2Q06481 763 aa13.51□□□□□ -0.25
ACTR6-208ENST00000551517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.49□□□□□ -0.25
ACTR6-208ENST00000551517 HNRNPUL2Q1KMD3 747 aaKnown RBP13.49□□□□□ -0.25
ACTR6-208ENST00000551517 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
ACTR6-208ENST00000551517 SAMD1Q6SPF0 538 aaPredicted RBP13.43□□□□□ -0.26
ACTR6-208ENST00000551517 MYCNP04198 464 aaPredicted RBP13.3□□□□□ -0.28
ACTR6-208ENST00000551517 SLC4A1APQ9BWU0 796 aaKnown RBP13.28□□□□□ -0.28
ACTR6-208ENST00000551517 POTEHQ6S545 545 aa13.27□□□□□ -0.29
ACTR6-208ENST00000551517 POLA2Q14181 598 aa13.18□□□□□ -0.3
ACTR6-208ENST00000551517 FOXD4L1Q9NU39 408 aa13.13□□□□□ -0.31
ACTR6-208ENST00000551517 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
ACTR6-208ENST00000551517 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
ACTR6-208ENST00000551517 ZBTB22O15209 634 aa12.96□□□□□ -0.33
ACTR6-208ENST00000551517 CHRDL2Q6WN34 429 aa12.84□□□□□ -0.35
ACTR6-208ENST00000551517 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
ACTR6-208ENST00000551517 OSCARQ8IYS5 282 aa12.77□□□□□ -0.37
ACTR6-208ENST00000551517 AKT1S1Q96B36 256 aa12.75□□□□□ -0.37
ACTR6-208ENST00000551517 ATXN8OSP0DMR3 200 aa12.69□□□□□ -0.38
ACTR6-208ENST00000551517 REM2Q8IYK8 340 aaPredicted RBP12.67□□□□□ -0.38
ACTR6-208ENST00000551517 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
ACTR6-208ENST00000551517 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
ACTR6-208ENST00000551517 FBLN2P98095 1184 aa12.53□□□□□ -0.4
ACTR6-208ENST00000551517 PIP4P2Q8N4L2 257 aa12.53□□□□□ -0.4
ACTR6-208ENST00000551517 SPDYE2BA6NHP3 402 aa12.45□□□□□ -0.42
ACTR6-208ENST00000551517 SPDYE6P0CI01 402 aa12.45□□□□□ -0.42
ACTR6-208ENST00000551517 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
ACTR6-208ENST00000551517 SPDYE2Q495Y8 402 aa12.45□□□□□ -0.42
ACTR6-208ENST00000551517 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
ACTR6-208ENST00000551517 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.42
ACTR6-208ENST00000551517 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
ACTR6-208ENST00000551517 HAX1O00165 279 aa12.36□□□□□ -0.43
ACTR6-208ENST00000551517 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
ACTR6-208ENST00000551517 CLEC11AQ9Y240 323 aa12.32□□□□□ -0.44
ACTR6-208ENST00000551517 CSRNP3Q8WYN3 585 aa12.28□□□□□ -0.44
ACTR6-208ENST00000551517 SSUH2Q9Y2M2 353 aa12.27□□□□□ -0.45
ACTR6-208ENST00000551517 SPDYE1Q8NFV5 336 aaPredicted RBP12.26□□□□□ -0.45
ACTR6-208ENST00000551517 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
ACTR6-208ENST00000551517 EVX2Q03828 476 aa12.21□□□□□ -0.45
ACTR6-208ENST00000551517 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
ACTR6-208ENST00000551517 ABCC9O60706 1549 aa12.14□□□□□ -0.47
ACTR6-208ENST00000551517 CHADLQ6NUI6 762 aa12.1□□□□□ -0.47
ACTR6-208ENST00000551517 PRR29P0C7W0 189 aa12.07□□□□□ -0.48
ACTR6-208ENST00000551517 C19orf67A6NJJ6 358 aa12.02□□□□□ -0.49
ACTR6-208ENST00000551517 GABBR2O75899 941 aa11.9□□□□□ -0.5
ACTR6-208ENST00000551517 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
ACTR6-208ENST00000551517 CD44P16070 742 aaKnown RBP11.82□□□□□ -0.52
ACTR6-208ENST00000551517 SPDYE4A6NLX3 237 aa11.81□□□□□ -0.52
ACTR6-208ENST00000551517 STAG3Q9UJ98 1225 aa11.75□□□□□ -0.53
ACTR6-208ENST00000551517 CREBZFQ9NS37 354 aa11.74□□□□□ -0.53
ACTR6-208ENST00000551517 ZRANB1Q9UGI0 708 aa11.66□□□□□ -0.54
ACTR6-208ENST00000551517 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
ACTR6-208ENST00000551517 LHX8Q68G74 356 aa11.64□□□□□ -0.55
ACTR6-208ENST00000551517 ZNF579Q8NAF0 562 aaKnown RBP11.59□□□□□ -0.55
ACTR6-208ENST00000551517 NISCHQ9Y2I1 1504 aa11.57□□□□□ -0.56
ACTR6-208ENST00000551517 CLCN6P51797 869 aa11.57□□□□□ -0.56
ACTR6-208ENST00000551517 DCBLD2Q96PD2 775 aa11.56□□□□□ -0.56
ACTR6-208ENST00000551517 TRIM41Q8WV44 630 aa11.52□□□□□ -0.57
ACTR6-208ENST00000551517 GALR2O43603 387 aaPredicted RBP11.51□□□□□ -0.57
ACTR6-208ENST00000551517 MNX1P50219 401 aaPredicted RBP11.51□□□□□ -0.57
ACTR6-208ENST00000551517 PAK3O75914 559 aaPredicted RBP11.5□□□□□ -0.57
ACTR6-208ENST00000551517 NPM1P06748 294 aaKnown RBP eCLIP11.5□□□□□ -0.57
ACTR6-208ENST00000551517 PHF12Q96QT6 1004 aa11.5□□□□□ -0.57
ACTR6-208ENST00000551517 PROM2Q8N271 834 aa11.44□□□□□ -0.58
ACTR6-208ENST00000551517 TSPYL2Q9H2G4 693 aaPredicted RBP11.36□□□□□ -0.59
ACTR6-208ENST00000551517 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
ACTR6-208ENST00000551517 PELP1Q8IZL8 1130 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms