RNA–Protein interactions for RNA: ENST00000551467.5

ERGIC2-209, Transcript of ERGIC and golgi 2, humanhuman

TSL 5

Gene ERGIC2, Length 765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-209ENST00000551467 AEBP2Q6ZN18 517 aaPredicted RBP36.36■■■■□ 3.41
ERGIC2-209ENST00000551467 CHIC1Q5VXU3 224 aa34.5■■■■□ 3.11
ERGIC2-209ENST00000551467 SENP3Q9H4L4 574 aaPredicted RBP31.09■■■□□ 2.57
ERGIC2-209ENST00000551467 PHF23Q9BUL5 403 aaPredicted RBP30.63■■■□□ 2.49
ERGIC2-209ENST00000551467 FOXD1Q16676 465 aa28.93■■■□□ 2.22
ERGIC2-209ENST00000551467 PLPPR3Q6T4P5 718 aa27.54■■■□□ 2
ERGIC2-209ENST00000551467 POTEDQ86YR6 584 aa27.37■■□□□ 1.97
ERGIC2-209ENST00000551467 MSH5O43196 834 aa27.32■■□□□ 1.96
ERGIC2-209ENST00000551467 PIAS4Q8N2W9 510 aaPredicted RBP27.02■■□□□ 1.92
ERGIC2-209ENST00000551467 PPP6R1Q9UPN7 881 aa26.97■■□□□ 1.91
ERGIC2-209ENST00000551467 ADRA2BP18089 450 aa26.86■■□□□ 1.89
ERGIC2-209ENST00000551467 MAPK8IP2Q13387 824 aaPredicted RBP24.68■■□□□ 1.54
ERGIC2-209ENST00000551467 SCAF1Q9H7N4 1312 aaKnown RBP24.66■■□□□ 1.54
ERGIC2-209ENST00000551467 DMRT2Q9Y5R5 561 aa24.64■■□□□ 1.54
ERGIC2-209ENST00000551467 PPP4R3CPQ6ZMV5 832 aa24.09■■□□□ 1.45
ERGIC2-209ENST00000551467 HOXD11P31277 338 aaPredicted RBP23.72■■□□□ 1.39
ERGIC2-209ENST00000551467 CNKSR2Q8WXI2 1034 aa23.7■■□□□ 1.38
ERGIC2-209ENST00000551467 CACNB1Q02641 598 aaPredicted RBP23.69■■□□□ 1.38
ERGIC2-209ENST00000551467 DCAF8L1A6NGE4 600 aa23.53■■□□□ 1.36
ERGIC2-209ENST00000551467 RNF216Q9NWF9 866 aaPredicted RBP23.51■■□□□ 1.35
ERGIC2-209ENST00000551467 RNF39Q9H2S5 420 aa23.21■■□□□ 1.31
ERGIC2-209ENST00000551467 NCBP3Q53F19 620 aaKnown RBP23.18■■□□□ 1.3
ERGIC2-209ENST00000551467 DNAJC5BQ9UF47 199 aa23■■□□□ 1.27
ERGIC2-209ENST00000551467 C1QBPQ07021 282 aaKnown RBP22.91■■□□□ 1.26
ERGIC2-209ENST00000551467 NPM3O75607 178 aaKnown RBP22.81■■□□□ 1.24
ERGIC2-209ENST00000551467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.53■■□□□ 1.2
ERGIC2-209ENST00000551467 KCNA4P22459 653 aa22.27■■□□□ 1.16
ERGIC2-209ENST00000551467 U3KPZ7 1027 aaPredicted RBP22.07■■□□□ 1.12
ERGIC2-209ENST00000551467 SLC4A2P04920 1241 aa21.8■■□□□ 1.08
ERGIC2-209ENST00000551467 SPINK5Q9NQ38 1064 aaPredicted RBP21.74■■□□□ 1.07
ERGIC2-209ENST00000551467 CAPN15O75808 1086 aa21.71■■□□□ 1.07
ERGIC2-209ENST00000551467 DSG3P32926 999 aa21.65■■□□□ 1.06
ERGIC2-209ENST00000551467 APLP2Q06481 763 aa21.52■■□□□ 1.04
ERGIC2-209ENST00000551467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.47■■□□□ 1.03
ERGIC2-209ENST00000551467 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
ERGIC2-209ENST00000551467 POTEHQ6S545 545 aa21.38■■□□□ 1.01
ERGIC2-209ENST00000551467 ZNF219Q9P2Y4 722 aaPredicted RBP21.38■■□□□ 1.01
ERGIC2-209ENST00000551467 TRHP20396 242 aaPredicted RBP21.33■■□□□ 1.01
ERGIC2-209ENST00000551467 SAMD1Q6SPF0 538 aaPredicted RBP21.33■■□□□ 1.01
ERGIC2-209ENST00000551467 ABCB7O75027 752 aa21.17■□□□□ 0.98
ERGIC2-209ENST00000551467 MYCNP04198 464 aaPredicted RBP21.14■□□□□ 0.97
ERGIC2-209ENST00000551467 SLC4A1APQ9BWU0 796 aaKnown RBP21.02■□□□□ 0.96
ERGIC2-209ENST00000551467 FOXD4L1Q9NU39 408 aa20.86■□□□□ 0.93
ERGIC2-209ENST00000551467 POLA2Q14181 598 aa20.76■□□□□ 0.91
ERGIC2-209ENST00000551467 RBM42Q9BTD8 480 aaKnown RBP20.7■□□□□ 0.9
ERGIC2-209ENST00000551467 ATF5Q9Y2D1 282 aaPredicted RBP20.58■□□□□ 0.89
ERGIC2-209ENST00000551467 ZBTB22O15209 634 aa20.47■□□□□ 0.87
ERGIC2-209ENST00000551467 ZBTB12Q9Y330 459 aaPredicted RBP20.41■□□□□ 0.86
ERGIC2-209ENST00000551467 CHRDL2Q6WN34 429 aa20.35■□□□□ 0.85
ERGIC2-209ENST00000551467 ATXN8OSP0DMR3 200 aa20.28■□□□□ 0.84
ERGIC2-209ENST00000551467 AKT1S1Q96B36 256 aa20.2■□□□□ 0.82
ERGIC2-209ENST00000551467 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
ERGIC2-209ENST00000551467 REM2Q8IYK8 340 aaPredicted RBP19.97■□□□□ 0.79
ERGIC2-209ENST00000551467 FBLN2P98095 1184 aa19.84■□□□□ 0.77
ERGIC2-209ENST00000551467 SP7Q8TDD2 431 aaPredicted RBP19.83■□□□□ 0.77
ERGIC2-209ENST00000551467 SPDYE2BA6NHP3 402 aa19.76■□□□□ 0.75
ERGIC2-209ENST00000551467 SPDYE6P0CI01 402 aa19.76■□□□□ 0.75
ERGIC2-209ENST00000551467 SPDYE2Q495Y8 402 aa19.76■□□□□ 0.75
ERGIC2-209ENST00000551467 PITPNM1O00562 1244 aa19.75■□□□□ 0.75
ERGIC2-209ENST00000551467 PIP4P2Q8N4L2 257 aa19.74■□□□□ 0.75
ERGIC2-209ENST00000551467 MKRN4PQ13434 485 aaPredicted RBP19.65■□□□□ 0.74
ERGIC2-209ENST00000551467 FXR2P51116 673 aaKnown RBP eCLIP19.63■□□□□ 0.73
ERGIC2-209ENST00000551467 HAX1O00165 279 aa19.55■□□□□ 0.72
ERGIC2-209ENST00000551467 SSUH2Q9Y2M2 353 aa19.49■□□□□ 0.71
ERGIC2-209ENST00000551467 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
ERGIC2-209ENST00000551467 ZNF692Q9BU19 519 aaPredicted RBP19.46■□□□□ 0.71
ERGIC2-209ENST00000551467 SPDYE1Q8NFV5 336 aaPredicted RBP19.42■□□□□ 0.7
ERGIC2-209ENST00000551467 CLEC11AQ9Y240 323 aa19.32■□□□□ 0.68
ERGIC2-209ENST00000551467 PRKAR2AP13861 404 aaKnown RBP19.23■□□□□ 0.67
ERGIC2-209ENST00000551467 EVX2Q03828 476 aa19.19■□□□□ 0.66
ERGIC2-209ENST00000551467 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
ERGIC2-209ENST00000551467 EHMT2Q96KQ7 1210 aa19.1■□□□□ 0.65
ERGIC2-209ENST00000551467 PRR29P0C7W0 189 aa19.03■□□□□ 0.64
ERGIC2-209ENST00000551467 C19orf67A6NJJ6 358 aa19■□□□□ 0.63
ERGIC2-209ENST00000551467 CHADLQ6NUI6 762 aa18.96■□□□□ 0.63
ERGIC2-209ENST00000551467 GABBR2O75899 941 aa18.79■□□□□ 0.6
ERGIC2-209ENST00000551467 FARP1Q9Y4F1 1045 aaPredicted RBP18.72■□□□□ 0.59
ERGIC2-209ENST00000551467 SPDYE4A6NLX3 237 aa18.69■□□□□ 0.58
ERGIC2-209ENST00000551467 STAG3Q9UJ98 1225 aa18.69■□□□□ 0.58
ERGIC2-209ENST00000551467 CD44P16070 742 aaKnown RBP18.62■□□□□ 0.57
ERGIC2-209ENST00000551467 LHX8Q68G74 356 aa18.61■□□□□ 0.57
ERGIC2-209ENST00000551467 CREBZFQ9NS37 354 aa18.55■□□□□ 0.56
ERGIC2-209ENST00000551467 CLCN6P51797 869 aa18.5■□□□□ 0.55
ERGIC2-209ENST00000551467 ZNF579Q8NAF0 562 aaKnown RBP18.37■□□□□ 0.53
ERGIC2-209ENST00000551467 POTEIP0CG38 1075 aa18.34■□□□□ 0.53
ERGIC2-209ENST00000551467 ZRANB1Q9UGI0 708 aa18.33■□□□□ 0.52
ERGIC2-209ENST00000551467 PROM2Q8N271 834 aa18.29■□□□□ 0.52
ERGIC2-209ENST00000551467 MNX1P50219 401 aaPredicted RBP18.24■□□□□ 0.51
ERGIC2-209ENST00000551467 NPM1P06748 294 aaKnown RBP eCLIP18.23■□□□□ 0.51
ERGIC2-209ENST00000551467 DCBLD2Q96PD2 775 aa18.23■□□□□ 0.51
ERGIC2-209ENST00000551467 PAK3O75914 559 aaPredicted RBP18.2■□□□□ 0.5
ERGIC2-209ENST00000551467 GALR2O43603 387 aaPredicted RBP18.1■□□□□ 0.49
ERGIC2-209ENST00000551467 PHF12Q96QT6 1004 aa18.05■□□□□ 0.48
ERGIC2-209ENST00000551467 PLEKHG5O94827 1062 aa17.86■□□□□ 0.45
ERGIC2-209ENST00000551467 MS4A3Q96HJ5 214 aa17.83■□□□□ 0.44
ERGIC2-209ENST00000551467 TSPYL2Q9H2G4 693 aaPredicted RBP17.83■□□□□ 0.44
ERGIC2-209ENST00000551467 MIER1Q8N108 512 aa17.82■□□□□ 0.44
ERGIC2-209ENST00000551467 CCDC61Q9Y6R9 512 aa17.81■□□□□ 0.44
ERGIC2-209ENST00000551467 OTUD5Q96G74 571 aa17.78■□□□□ 0.44
ERGIC2-209ENST00000551467 ASTLQ6HA08 431 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms