RNA–Protein interactions for RNA: ENST00000551466.1

LRP10-204, Transcript of LDL receptor related protein 10, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene LRP10, Length 2,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP10-204ENST00000551466 NISCHQ9Y2I1 1504 aa28.73■■■□□ 2.19
LRP10-204ENST00000551466 SHROOM4Q9ULL8 1493 aa24.46■■□□□ 1.51
LRP10-204ENST00000551466 CCDC180Q9P1Z9 1646 aa24.45■■□□□ 1.5
LRP10-204ENST00000551466 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
LRP10-204ENST00000551466 DCAF8L2P0C7V8 631 aa24.03■■□□□ 1.44
LRP10-204ENST00000551466 SUPT5HO00267 1087 aaKnown RBP23.93■■□□□ 1.42
LRP10-204ENST00000551466 DCAF1Q9Y4B6 1507 aa23.53■■□□□ 1.36
LRP10-204ENST00000551466 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
LRP10-204ENST00000551466 SCRIBQ14160 1630 aa22.96■■□□□ 1.27
LRP10-204ENST00000551466 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
LRP10-204ENST00000551466 ABCC9O60706 1549 aa22.91■■□□□ 1.26
LRP10-204ENST00000551466 RSF1Q96T23 1441 aaPredicted RBP22.69■■□□□ 1.22
LRP10-204ENST00000551466 NACADO15069 1562 aa22.68■■□□□ 1.22
LRP10-204ENST00000551466 LOC105371045A0A1W2PR82 267 aa22.48■■□□□ 1.19
LRP10-204ENST00000551466 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
LRP10-204ENST00000551466 RB1CC1Q8TDY2 1594 aa22.41■■□□□ 1.18
LRP10-204ENST00000551466 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
LRP10-204ENST00000551466 TRIM41Q8WV44 630 aa22.29■■□□□ 1.16
LRP10-204ENST00000551466 PCGF6Q9BYE7 350 aa22.28■■□□□ 1.16
LRP10-204ENST00000551466 WIZO95785 1651 aa22.21■■□□□ 1.15
LRP10-204ENST00000551466 FAM9AQ8IZU1 332 aaPredicted RBP22.13■■□□□ 1.13
LRP10-204ENST00000551466 HRCP23327 699 aa22.1■■□□□ 1.13
LRP10-204ENST00000551466 BAZ1AQ9NRL2 1556 aaPredicted RBP22.07■■□□□ 1.12
LRP10-204ENST00000551466 UNC13AQ9UPW8 1703 aa22.01■■□□□ 1.11
LRP10-204ENST00000551466 EHMT2Q96KQ7 1210 aa21.98■■□□□ 1.11
LRP10-204ENST00000551466 PABPN1Q86U42 306 aaKnown RBP eCLIP21.92■■□□□ 1.1
LRP10-204ENST00000551466 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
LRP10-204ENST00000551466 TRIM26Q12899 539 aaPredicted RBP21.86■■□□□ 1.09
LRP10-204ENST00000551466 TOP2AP11388 1531 aaKnown RBP21.83■■□□□ 1.08
LRP10-204ENST00000551466 CCDC88BA6NC98 1476 aa21.78■■□□□ 1.08
LRP10-204ENST00000551466 EIF4G1Q04637 1599 aaKnown RBP21.77■■□□□ 1.08
LRP10-204ENST00000551466 BICRAQ9NZM4 1560 aa21.76■■□□□ 1.07
LRP10-204ENST00000551466 PPARGC1BQ86YN6 1023 aaKnown RBP21.72■■□□□ 1.07
LRP10-204ENST00000551466 SMARCA2P51531 1590 aa21.72■■□□□ 1.07
LRP10-204ENST00000551466 ABCC8Q09428 1581 aa21.67■■□□□ 1.06
LRP10-204ENST00000551466 PEG3Q9GZU2 1588 aa21.46■■□□□ 1.03
LRP10-204ENST00000551466 SOGA1O94964 1423 aa21.45■■□□□ 1.02
LRP10-204ENST00000551466 ATAD2BQ9ULI0 1458 aa21.41■■□□□ 1.02
LRP10-204ENST00000551466 RUSC2Q8N2Y8 1516 aa21.36■■□□□ 1.01
LRP10-204ENST00000551466 BAZ1BQ9UIG0 1483 aaKnown RBP21.35■■□□□ 1.01
LRP10-204ENST00000551466 CSRNP3Q8WYN3 585 aa21.33■■□□□ 1.01
LRP10-204ENST00000551466 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1
LRP10-204ENST00000551466 UBTFP17480 764 aaKnown RBP21.27■■□□□ 1
LRP10-204ENST00000551466 ZEB1P37275 1124 aaPredicted RBP21.27■□□□□ 0.99
LRP10-204ENST00000551466 EEA1Q15075 1411 aa21.26■□□□□ 0.99
LRP10-204ENST00000551466 CEP162Q5TB80 1403 aa21.25■□□□□ 0.99
LRP10-204ENST00000551466 TNIKQ9UKE5 1360 aa21.22■□□□□ 0.99
LRP10-204ENST00000551466 TTBK1Q5TCY1 1321 aaPredicted RBP21.21■□□□□ 0.99
LRP10-204ENST00000551466 SYNJ1O43426 1573 aa21.21■□□□□ 0.99
LRP10-204ENST00000551466 GOLGA3Q08378 1498 aa21.13■□□□□ 0.97
LRP10-204ENST00000551466 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
LRP10-204ENST00000551466 CEP164Q9UPV0 1460 aa21.02■□□□□ 0.96
LRP10-204ENST00000551466 NCAPD3P42695 1498 aa21.01■□□□□ 0.95
LRP10-204ENST00000551466 CCER1Q8TC90 406 aaPredicted RBP20.99■□□□□ 0.95
LRP10-204ENST00000551466 HMGXB3Q12766 1538 aa20.96■□□□□ 0.95
LRP10-204ENST00000551466 KIF21BO75037 1637 aa20.96■□□□□ 0.95
LRP10-204ENST00000551466 TOP2BQ02880 1626 aa20.94■□□□□ 0.94
LRP10-204ENST00000551466 RANGAP1P46060 587 aaPredicted RBP20.94■□□□□ 0.94
LRP10-204ENST00000551466 RAPGEF2Q9Y4G8 1499 aa20.92■□□□□ 0.94
LRP10-204ENST00000551466 CLIP1P30622 1438 aa20.9■□□□□ 0.94
LRP10-204ENST00000551466 BIVM-ERCC5R4GMW8 1640 aa20.85■□□□□ 0.93
LRP10-204ENST00000551466 CUX1P39880 1505 aa20.8■□□□□ 0.92
LRP10-204ENST00000551466 CFTRP13569 1480 aa20.8■□□□□ 0.92
LRP10-204ENST00000551466 VPS8Q8N3P4 1428 aa20.76■□□□□ 0.91
LRP10-204ENST00000551466 APLP2Q06481 763 aa20.75■□□□□ 0.91
LRP10-204ENST00000551466 PRXQ9BXM0 1461 aa20.71■□□□□ 0.91
LRP10-204ENST00000551466 HNRNPUL2Q1KMD3 747 aaKnown RBP20.7■□□□□ 0.9
LRP10-204ENST00000551466 KIF27Q86VH2 1401 aa20.68■□□□□ 0.9
LRP10-204ENST00000551466 ERICH3Q5RHP9 1530 aa20.66■□□□□ 0.9
LRP10-204ENST00000551466 PELP1Q8IZL8 1130 aaKnown RBP20.64■□□□□ 0.9
LRP10-204ENST00000551466 CADPSQ9ULU8 1353 aa20.63■□□□□ 0.89
LRP10-204ENST00000551466 CC2D2AQ9P2K1 1620 aa20.59■□□□□ 0.89
LRP10-204ENST00000551466 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
LRP10-204ENST00000551466 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
LRP10-204ENST00000551466 CUX2O14529 1486 aa20.54■□□□□ 0.88
LRP10-204ENST00000551466 KANK4Q5T7N3 995 aaPredicted RBP20.49■□□□□ 0.87
LRP10-204ENST00000551466 IGF1RP08069 1367 aa20.49■□□□□ 0.87
LRP10-204ENST00000551466 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
LRP10-204ENST00000551466 DIEXFQ68CQ4 756 aaKnown RBP20.45■□□□□ 0.86
LRP10-204ENST00000551466 FANCD2Q9BXW9 1451 aa20.42■□□□□ 0.86
LRP10-204ENST00000551466 ARHGAP35Q9NRY4 1499 aa20.42■□□□□ 0.86
LRP10-204ENST00000551466 CARMIL1Q5VZK9 1371 aa20.41■□□□□ 0.86
LRP10-204ENST00000551466 NESP48681 1621 aa20.36■□□□□ 0.85
LRP10-204ENST00000551466 ZNF316A6NFI3 1004 aaPredicted RBP20.34■□□□□ 0.85
LRP10-204ENST00000551466 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
LRP10-204ENST00000551466 P3H3Q8IVL6 736 aa20.27■□□□□ 0.83
LRP10-204ENST00000551466 DNMBPQ6XZF7 1577 aa20.26■□□□□ 0.83
LRP10-204ENST00000551466 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
LRP10-204ENST00000551466 POLA1P09884 1462 aaPredicted RBP20.25■□□□□ 0.83
LRP10-204ENST00000551466 SCAF1Q9H7N4 1312 aaKnown RBP20.24■□□□□ 0.83
LRP10-204ENST00000551466 RRBP1Q9P2E9 1410 aaKnown RBP20.24■□□□□ 0.83
LRP10-204ENST00000551466 ITGAEP38570 1179 aa20.24■□□□□ 0.83
LRP10-204ENST00000551466 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
LRP10-204ENST00000551466 DNAJC5BQ9UF47 199 aa20.21■□□□□ 0.83
LRP10-204ENST00000551466 ABCA10Q8WWZ4 1543 aa20.21■□□□□ 0.83
LRP10-204ENST00000551466 ATP1B4Q9UN42 357 aaPredicted RBP20.2■□□□□ 0.82
LRP10-204ENST00000551466 DHX57Q6P158 1386 aaKnown RBP20.19■□□□□ 0.82
LRP10-204ENST00000551466 TIAM1Q13009 1591 aa20.15■□□□□ 0.82
LRP10-204ENST00000551466 MYT1Q01538 1121 aa20.15■□□□□ 0.82
LRP10-204ENST00000551466 NEUROD1Q13562 356 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms