RNA–Protein interactions for RNA: ENST00000550834.1

DDX23-207, Transcript of DEAD-box helicase 23, humanhuman

TSL 5

Gene DDX23, Length 869 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-207ENST00000550834 PTBP1P26599 531 aaKnown RBP eCLIP8.58□□□□□ -1.043e-15■■■■■ 30.4
DDX23-207ENST00000550834 FXR2P51116 673 aaKnown RBP eCLIP12.69□□□□□ -0.388e-12■■■■■ 51.6
DDX23-207ENST00000550834 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.05□□□□□ -0.161e-10■■■■□ 19.5
DDX23-207ENST00000550834 EFTUD2Q15029 972 aaKnown RBP eCLIP10.78□□□□□ -0.685e-10■□□□□ 9.9
DDX23-207ENST00000550834 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.3□□□□□ -0.764e-9■■□□□ 13.6
DDX23-207ENST00000550834 MATR3P43243 847 aaKnown RBP eCLIP12.7□□□□□ -0.385e-9■■■□□ 17.9
DDX23-207ENST00000550834 SRSF1Q07955 248 aaKnown RBP eCLIP12.01□□□□□ -0.493e-8■□□□□ 9.1
DDX23-207ENST00000550834 SF3B4Q15427 424 aaKnown RBP eCLIP10.82□□□□□ -0.681e-7■■□□□ 12.1
DDX23-207ENST00000550834 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.31■□□□□ 0.21e-7■■■□□ 15.8
DDX23-207ENST00000550834 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.83□□□□□ -0.521e-7■□□□□ 10.5
DDX23-207ENST00000550834 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.17□□□□□ -0.622e-7■■■■□ 23.6
DDX23-207ENST00000550834 G3BP1Q13283 466 aaKnown RBP eCLIP14.35□□□□□ -0.112e-7■□□□□ 10.7
DDX23-207ENST00000550834 AARSP49588 968 aaKnown RBP eCLIP12.71□□□□□ -0.372e-7■■□□□ 13.7
DDX23-207ENST00000550834 RBM15Q96T37 977 aaKnown RBP eCLIP11.82□□□□□ -0.523e-7■■■■■ 30
DDX23-207ENST00000550834 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.48■□□□□ 0.553e-7■■■■□ 19.4
DDX23-207ENST00000550834 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.3□□□□□ -0.443e-7■□□□□ 9.3
DDX23-207ENST00000550834 PPIGQ13427 754 aaKnown RBP eCLIP14.15□□□□□ -0.144e-7■■□□□ 11.9
DDX23-207ENST00000550834 TRA2AQ13595 282 aaKnown RBP eCLIP11.78□□□□□ -0.526e-7■■□□□ 14
DDX23-207ENST00000550834 ZNF622Q969S3 477 aaKnown RBP eCLIP15.93■□□□□ 0.147e-7■■■□□ 18.2
DDX23-207ENST00000550834 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.27□□□□□ -0.618e-7■■■■□ 20.1
DDX23-207ENST00000550834 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.091e-6■■■□□ 18.7
DDX23-207ENST00000550834 FMR1Q06787 632 aaKnown RBP eCLIP15.57■□□□□ 0.081e-6■□□□□ 10
DDX23-207ENST00000550834 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.33□□□□□ -0.761e-6■■■□□ 17.7
DDX23-207ENST00000550834 PUM1Q14671 1186 aaKnown RBP eCLIP13.23□□□□□ -0.291e-6■■□□□ 13.8
DDX23-207ENST00000550834 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.4□□□□□ -0.422e-6■■■■■ 53.7
DDX23-207ENST00000550834 UPF1Q92900 1129 aaKnown RBP eCLIP18.21■□□□□ 0.513e-6■■■■□ 23
DDX23-207ENST00000550834 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.73□□□□□ -0.693e-6■■■■■ 29
DDX23-207ENST00000550834 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.14□□□□□ -0.153e-6■■□□□ 11.5
DDX23-207ENST00000550834 WDR43Q15061 677 aaKnown RBP eCLIP15.09■□□□□ 0.013e-6■□□□□ 11.1
DDX23-207ENST00000550834 SF3A3Q12874 501 aaKnown RBP eCLIP9.29□□□□□ -0.924e-6■■■■□ 22.2
Retrieved 30 of 30 RNA–protein pairs in 6.2 ms