RNA–Protein interactions for RNA: ENST00000550813.5

ACTR6-206, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 4

Gene ACTR6, Length 351 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-206ENST00000550813 NISCHQ9Y2I1 1504 aa29.66■■■□□ 2.34
ACTR6-206ENST00000550813 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
ACTR6-206ENST00000550813 ABCC9O60706 1549 aa25.83■■□□□ 1.72
ACTR6-206ENST00000550813 RB1CC1Q8TDY2 1594 aa24.86■■□□□ 1.57
ACTR6-206ENST00000550813 NACADO15069 1562 aa24.8■■□□□ 1.56
ACTR6-206ENST00000550813 ZCCHC6Q5VYS8 1495 aaKnown RBP24.74■■□□□ 1.55
ACTR6-206ENST00000550813 DCAF8L2P0C7V8 631 aa24.69■■□□□ 1.54
ACTR6-206ENST00000550813 MYO15BQ96JP2 1530 aa24.63■■□□□ 1.53
ACTR6-206ENST00000550813 DCAF1Q9Y4B6 1507 aa24.54■■□□□ 1.52
ACTR6-206ENST00000550813 UNC13AQ9UPW8 1703 aa24.38■■□□□ 1.49
ACTR6-206ENST00000550813 SCRIBQ14160 1630 aa24.15■■□□□ 1.46
ACTR6-206ENST00000550813 BICRAQ9NZM4 1560 aa24.11■■□□□ 1.45
ACTR6-206ENST00000550813 PABPN1Q86U42 306 aaKnown RBP eCLIP24.05■■□□□ 1.44
ACTR6-206ENST00000550813 SHROOM4Q9ULL8 1493 aa23.84■■□□□ 1.41
ACTR6-206ENST00000550813 DNAJC5BQ9UF47 199 aa23.58■■□□□ 1.37
ACTR6-206ENST00000550813 EIF4G1Q04637 1599 aaKnown RBP23.48■■□□□ 1.35
ACTR6-206ENST00000550813 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
ACTR6-206ENST00000550813 CECR2Q9BXF3 1484 aa23.18■■□□□ 1.3
ACTR6-206ENST00000550813 SMARCA4P51532 1647 aa23.08■■□□□ 1.28
ACTR6-206ENST00000550813 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
ACTR6-206ENST00000550813 SMARCA2P51531 1590 aa22.89■■□□□ 1.26
ACTR6-206ENST00000550813 MROH2BQ7Z745 1585 aa22.88■■□□□ 1.25
ACTR6-206ENST00000550813 ATAD2BQ9ULI0 1458 aa22.87■■□□□ 1.25
ACTR6-206ENST00000550813 NCAPD3P42695 1498 aa22.83■■□□□ 1.25
ACTR6-206ENST00000550813 PEG3Q9GZU2 1588 aa22.81■■□□□ 1.24
ACTR6-206ENST00000550813 HMGXB3Q12766 1538 aa22.81■■□□□ 1.24
ACTR6-206ENST00000550813 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
ACTR6-206ENST00000550813 WIZO95785 1651 aa22.67■■□□□ 1.22
ACTR6-206ENST00000550813 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
ACTR6-206ENST00000550813 TOP2AP11388 1531 aaKnown RBP22.41■■□□□ 1.18
ACTR6-206ENST00000550813 NESP48681 1621 aa22.35■■□□□ 1.17
ACTR6-206ENST00000550813 LAMC3Q9Y6N6 1575 aa22.31■■□□□ 1.16
ACTR6-206ENST00000550813 ERCC6Q03468 1493 aa22.27■■□□□ 1.16
ACTR6-206ENST00000550813 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
ACTR6-206ENST00000550813 CADPSQ9ULU8 1353 aa22.16■■□□□ 1.14
ACTR6-206ENST00000550813 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
ACTR6-206ENST00000550813 PDS5BQ9NTI5 1447 aa22.09■■□□□ 1.13
ACTR6-206ENST00000550813 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.12
ACTR6-206ENST00000550813 CFTRP13569 1480 aa22.06■■□□□ 1.12
ACTR6-206ENST00000550813 PRDM2Q13029 1718 aa22.05■■□□□ 1.12
ACTR6-206ENST00000550813 CUX2O14529 1486 aa22.02■■□□□ 1.12
ACTR6-206ENST00000550813 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
ACTR6-206ENST00000550813 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
ACTR6-206ENST00000550813 SUPT5HO00267 1087 aaKnown RBP21.96■■□□□ 1.11
ACTR6-206ENST00000550813 MRC2Q9UBG0 1479 aa21.92■■□□□ 1.1
ACTR6-206ENST00000550813 WDR62O43379 1518 aa21.87■■□□□ 1.09
ACTR6-206ENST00000550813 URB2Q14146 1524 aaKnown RBP21.76■■□□□ 1.07
ACTR6-206ENST00000550813 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
ACTR6-206ENST00000550813 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
ACTR6-206ENST00000550813 ABCC8Q09428 1581 aa21.58■■□□□ 1.05
ACTR6-206ENST00000550813 CUX1P39880 1505 aa21.48■■□□□ 1.03
ACTR6-206ENST00000550813 IFT140Q96RY7 1462 aa21.47■■□□□ 1.03
ACTR6-206ENST00000550813 POLA1P09884 1462 aaPredicted RBP21.43■■□□□ 1.02
ACTR6-206ENST00000550813 TARBP1Q13395 1621 aaKnown RBP21.42■■□□□ 1.02
ACTR6-206ENST00000550813 FGD5Q6ZNL6 1462 aa21.4■■□□□ 1.02
ACTR6-206ENST00000550813 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.01
ACTR6-206ENST00000550813 EIF4G3O43432 1585 aaKnown RBP21.38■■□□□ 1.01
ACTR6-206ENST00000550813 BIVM-ERCC5R4GMW8 1640 aa21.33■■□□□ 1.01
ACTR6-206ENST00000550813 RAD54L2Q9Y4B4 1467 aa21.33■■□□□ 1.01
ACTR6-206ENST00000550813 SYNJ1O43426 1573 aa21.31■■□□□ 1
ACTR6-206ENST00000550813 WDR97A6NE52 1622 aa21.31■■□□□ 1
ACTR6-206ENST00000550813 WRNQ14191 1432 aaPredicted RBP eCLIP21.3■■□□□ 1
ACTR6-206ENST00000550813 TOP2BQ02880 1626 aa21.3■■□□□ 1
ACTR6-206ENST00000550813 SOGA1O94964 1423 aa21.29■■□□□ 1
ACTR6-206ENST00000550813 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.99
ACTR6-206ENST00000550813 DNAJC5Q9H3Z4 198 aa21.22■□□□□ 0.99
ACTR6-206ENST00000550813 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
ACTR6-206ENST00000550813 ABCA10Q8WWZ4 1543 aa21.17■□□□□ 0.98
ACTR6-206ENST00000550813 PBRM1Q86U86 1689 aa21.16■□□□□ 0.98
ACTR6-206ENST00000550813 ABCA5Q8WWZ7 1642 aa21.15■□□□□ 0.98
ACTR6-206ENST00000550813 CHD1O14646 1710 aa21.12■□□□□ 0.97
ACTR6-206ENST00000550813 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
ACTR6-206ENST00000550813 SNAPC4Q5SXM2 1469 aa21.09■□□□□ 0.97
ACTR6-206ENST00000550813 GRIN2BQ13224 1484 aa21.08■□□□□ 0.97
ACTR6-206ENST00000550813 MAGI1Q96QZ7 1491 aaPredicted RBP21.04■□□□□ 0.96
ACTR6-206ENST00000550813 OSCARQ8IYS5 282 aa21■□□□□ 0.95
ACTR6-206ENST00000550813 ADAMTS12P58397 1594 aa20.96■□□□□ 0.95
ACTR6-206ENST00000550813 SYNJ2O15056 1496 aa20.95■□□□□ 0.94
ACTR6-206ENST00000550813 FBLN2P98095 1184 aa20.95■□□□□ 0.94
ACTR6-206ENST00000550813 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
ACTR6-206ENST00000550813 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
ACTR6-206ENST00000550813 CLASP1Q7Z460 1538 aa20.84■□□□□ 0.93
ACTR6-206ENST00000550813 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
ACTR6-206ENST00000550813 GRIN2AQ12879 1464 aa20.83■□□□□ 0.93
ACTR6-206ENST00000550813 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.93
ACTR6-206ENST00000550813 RIMBP3CA6NJZ7 1639 aa20.82■□□□□ 0.92
ACTR6-206ENST00000550813 RIMBP3BA6NNM3 1639 aa20.82■□□□□ 0.92
ACTR6-206ENST00000550813 RIMBP3Q9UFD9 1639 aa20.82■□□□□ 0.92
ACTR6-206ENST00000550813 CUL7Q14999 1698 aa20.8■□□□□ 0.92
ACTR6-206ENST00000550813 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
ACTR6-206ENST00000550813 CEP170Q5SW79 1584 aa20.76■□□□□ 0.91
ACTR6-206ENST00000550813 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
ACTR6-206ENST00000550813 NUP160Q12769 1436 aa20.72■□□□□ 0.91
ACTR6-206ENST00000550813 IGF1RP08069 1367 aa20.7■□□□□ 0.9
ACTR6-206ENST00000550813 RUSC2Q8N2Y8 1516 aa20.67■□□□□ 0.9
ACTR6-206ENST00000550813 SHROOM2Q13796 1616 aa20.62■□□□□ 0.89
ACTR6-206ENST00000550813 ARAP1Q96P48 1450 aa20.61■□□□□ 0.89
ACTR6-206ENST00000550813 CARMIL1Q5VZK9 1371 aa20.6■□□□□ 0.89
ACTR6-206ENST00000550813 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
ACTR6-206ENST00000550813 RAPGEF2Q9Y4G8 1499 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 205.1 ms