RNA–Protein interactions for RNA: ENST00000550535.5

PPHLN1-215, Transcript of periphilin 1, humanhuman

TSL 3

Gene PPHLN1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPHLN1-215ENST00000550535 AEBP2Q6ZN18 517 aaPredicted RBP35.08■■■■□ 3.21
PPHLN1-215ENST00000550535 CHIC1Q5VXU3 224 aa34.45■■■■□ 3.11
PPHLN1-215ENST00000550535 NISCHQ9Y2I1 1504 aa33.4■■■□□ 2.94
PPHLN1-215ENST00000550535 PHF23Q9BUL5 403 aaPredicted RBP30.33■■■□□ 2.45
PPHLN1-215ENST00000550535 ABCC9O60706 1549 aa30.05■■■□□ 2.4
PPHLN1-215ENST00000550535 CCDC180Q9P1Z9 1646 aa29.87■■■□□ 2.37
PPHLN1-215ENST00000550535 SENP3Q9H4L4 574 aaPredicted RBP29.73■■■□□ 2.35
PPHLN1-215ENST00000550535 RB1CC1Q8TDY2 1594 aa28.45■■■□□ 2.15
PPHLN1-215ENST00000550535 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
PPHLN1-215ENST00000550535 NACADO15069 1562 aa28.24■■■□□ 2.11
PPHLN1-215ENST00000550535 DNAJC5BQ9UF47 199 aa28.23■■■□□ 2.11
PPHLN1-215ENST00000550535 PLPPR3Q6T4P5 718 aa28.06■■■□□ 2.08
PPHLN1-215ENST00000550535 PABPN1Q86U42 306 aaKnown RBP eCLIP28.06■■■□□ 2.08
PPHLN1-215ENST00000550535 UNC13AQ9UPW8 1703 aa27.96■■■□□ 2.07
PPHLN1-215ENST00000550535 MYO15BQ96JP2 1530 aa27.76■■■□□ 2.03
PPHLN1-215ENST00000550535 BICRAQ9NZM4 1560 aa27.72■■■□□ 2.03
PPHLN1-215ENST00000550535 ZCCHC6Q5VYS8 1495 aaKnown RBP27.67■■■□□ 2.02
PPHLN1-215ENST00000550535 FOXD1Q16676 465 aa27.58■■■□□ 2.01
PPHLN1-215ENST00000550535 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
PPHLN1-215ENST00000550535 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
PPHLN1-215ENST00000550535 SHROOM4Q9ULL8 1493 aa27.09■■□□□ 1.93
PPHLN1-215ENST00000550535 CC2D2AQ9P2K1 1620 aa27.08■■□□□ 1.93
PPHLN1-215ENST00000550535 EIF4G1Q04637 1599 aaKnown RBP27■■□□□ 1.91
PPHLN1-215ENST00000550535 CECR2Q9BXF3 1484 aa26.99■■□□□ 1.91
PPHLN1-215ENST00000550535 PPP6R1Q9UPN7 881 aa26.71■■□□□ 1.87
PPHLN1-215ENST00000550535 ADRA2BP18089 450 aa26.69■■□□□ 1.86
PPHLN1-215ENST00000550535 NCAPD3P42695 1498 aa26.1■■□□□ 1.77
PPHLN1-215ENST00000550535 ATAD2BQ9ULI0 1458 aa26.08■■□□□ 1.77
PPHLN1-215ENST00000550535 SMARCA4P51532 1647 aa26.06■■□□□ 1.76
PPHLN1-215ENST00000550535 PIAS4Q8N2W9 510 aaPredicted RBP26.05■■□□□ 1.76
PPHLN1-215ENST00000550535 SMARCA2P51531 1590 aa25.94■■□□□ 1.74
PPHLN1-215ENST00000550535 BAZ1AQ9NRL2 1556 aaPredicted RBP25.88■■□□□ 1.73
PPHLN1-215ENST00000550535 HMGXB3Q12766 1538 aa25.88■■□□□ 1.73
PPHLN1-215ENST00000550535 ERCC6Q03468 1493 aa25.87■■□□□ 1.73
PPHLN1-215ENST00000550535 NESP48681 1621 aa25.85■■□□□ 1.73
PPHLN1-215ENST00000550535 BAZ1BQ9UIG0 1483 aaKnown RBP25.82■■□□□ 1.72
PPHLN1-215ENST00000550535 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
PPHLN1-215ENST00000550535 DNAJC5Q9H3Z4 198 aa25.76■■□□□ 1.71
PPHLN1-215ENST00000550535 PEG3Q9GZU2 1588 aa25.71■■□□□ 1.71
PPHLN1-215ENST00000550535 CUX2O14529 1486 aa25.71■■□□□ 1.71
PPHLN1-215ENST00000550535 WIZO95785 1651 aa25.55■■□□□ 1.68
PPHLN1-215ENST00000550535 LAMC3Q9Y6N6 1575 aa25.49■■□□□ 1.67
PPHLN1-215ENST00000550535 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
PPHLN1-215ENST00000550535 THOC2Q8NI27 1593 aaKnown RBP25.47■■□□□ 1.67
PPHLN1-215ENST00000550535 PDS5BQ9NTI5 1447 aa25.36■■□□□ 1.65
PPHLN1-215ENST00000550535 CADPSQ9ULU8 1353 aa25.34■■□□□ 1.65
PPHLN1-215ENST00000550535 MSH5O43196 834 aa25.34■■□□□ 1.65
PPHLN1-215ENST00000550535 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
PPHLN1-215ENST00000550535 MRC2Q9UBG0 1479 aa25.16■■□□□ 1.62
PPHLN1-215ENST00000550535 TOP2AP11388 1531 aaKnown RBP25.11■■□□□ 1.61
PPHLN1-215ENST00000550535 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
PPHLN1-215ENST00000550535 CEP164Q9UPV0 1460 aa25.09■■□□□ 1.61
PPHLN1-215ENST00000550535 WDR62O43379 1518 aa25.08■■□□□ 1.61
PPHLN1-215ENST00000550535 CFTRP13569 1480 aa25.04■■□□□ 1.6
PPHLN1-215ENST00000550535 URB2Q14146 1524 aaKnown RBP24.91■■□□□ 1.58
PPHLN1-215ENST00000550535 CCDC88BA6NC98 1476 aa24.89■■□□□ 1.58
PPHLN1-215ENST00000550535 PRDM2Q13029 1718 aa24.81■■□□□ 1.56
PPHLN1-215ENST00000550535 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
PPHLN1-215ENST00000550535 PPP4R3CPQ6ZMV5 832 aa24.76■■□□□ 1.55
PPHLN1-215ENST00000550535 ZNF608Q9ULD9 1512 aaPredicted RBP24.63■■□□□ 1.53
PPHLN1-215ENST00000550535 OSCARQ8IYS5 282 aa24.63■■□□□ 1.53
PPHLN1-215ENST00000550535 TOPBP1Q92547 1522 aa24.61■■□□□ 1.53
PPHLN1-215ENST00000550535 IFT140Q96RY7 1462 aa24.55■■□□□ 1.52
PPHLN1-215ENST00000550535 DNMBPQ6XZF7 1577 aa24.49■■□□□ 1.51
PPHLN1-215ENST00000550535 ABCC8Q09428 1581 aa24.44■■□□□ 1.5
PPHLN1-215ENST00000550535 EIF4G3O43432 1585 aaKnown RBP24.43■■□□□ 1.5
PPHLN1-215ENST00000550535 AQRO60306 1485 aaKnown RBP eCLIP24.43■■□□□ 1.5
PPHLN1-215ENST00000550535 KCNA4P22459 653 aa24.42■■□□□ 1.5
PPHLN1-215ENST00000550535 SCAF1Q9H7N4 1312 aaKnown RBP24.4■■□□□ 1.5
PPHLN1-215ENST00000550535 TARBP1Q13395 1621 aaKnown RBP24.39■■□□□ 1.5
PPHLN1-215ENST00000550535 POLA1P09884 1462 aaPredicted RBP24.37■■□□□ 1.49
PPHLN1-215ENST00000550535 RAD54L2Q9Y4B4 1467 aa24.37■■□□□ 1.49
PPHLN1-215ENST00000550535 RIMBP3CA6NJZ7 1639 aa24.35■■□□□ 1.49
PPHLN1-215ENST00000550535 RIMBP3BA6NNM3 1639 aa24.35■■□□□ 1.49
PPHLN1-215ENST00000550535 RIMBP3Q9UFD9 1639 aa24.35■■□□□ 1.49
PPHLN1-215ENST00000550535 SUPT5HO00267 1087 aaKnown RBP24.34■■□□□ 1.49
PPHLN1-215ENST00000550535 CHD1O14646 1710 aa24.3■■□□□ 1.48
PPHLN1-215ENST00000550535 FBLN2P98095 1184 aa24.3■■□□□ 1.48
PPHLN1-215ENST00000550535 TDRD9Q8NDG6 1382 aaKnown RBP24.28■■□□□ 1.48
PPHLN1-215ENST00000550535 SOGA1O94964 1423 aa24.27■■□□□ 1.48
PPHLN1-215ENST00000550535 CUX1P39880 1505 aa24.25■■□□□ 1.47
PPHLN1-215ENST00000550535 FGD5Q6ZNL6 1462 aa24.24■■□□□ 1.47
PPHLN1-215ENST00000550535 ARHGEF11O15085 1522 aa24.24■■□□□ 1.47
PPHLN1-215ENST00000550535 MAPK8IP2Q13387 824 aaPredicted RBP24.16■■□□□ 1.46
PPHLN1-215ENST00000550535 NCBP3Q53F19 620 aaKnown RBP24.16■■□□□ 1.46
PPHLN1-215ENST00000550535 CYB5RLQ6IPT4 315 aa24.16■■□□□ 1.46
PPHLN1-215ENST00000550535 SNAPC4Q5SXM2 1469 aa24.13■■□□□ 1.45
PPHLN1-215ENST00000550535 CHMP7Q8WUX9 453 aaPredicted RBP24.04■■□□□ 1.44
PPHLN1-215ENST00000550535 WDR97A6NE52 1622 aa24.02■■□□□ 1.44
PPHLN1-215ENST00000550535 ARAP1Q96P48 1450 aa24.02■■□□□ 1.44
PPHLN1-215ENST00000550535 CNKSR2Q8WXI2 1034 aa24.02■■□□□ 1.44
PPHLN1-215ENST00000550535 GRIN2BQ13224 1484 aa24■■□□□ 1.43
PPHLN1-215ENST00000550535 PBRM1Q86U86 1689 aa23.98■■□□□ 1.43
PPHLN1-215ENST00000550535 GAPVD1Q14C86 1478 aa23.96■■□□□ 1.43
PPHLN1-215ENST00000550535 MAGI1Q96QZ7 1491 aaPredicted RBP23.96■■□□□ 1.43
PPHLN1-215ENST00000550535 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
PPHLN1-215ENST00000550535 SYNJ2O15056 1496 aa23.91■■□□□ 1.42
PPHLN1-215ENST00000550535 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
PPHLN1-215ENST00000550535 ABCA10Q8WWZ4 1543 aa23.89■■□□□ 1.42
PPHLN1-215ENST00000550535 ABCA5Q8WWZ7 1642 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms