RNA–Protein interactions for RNA: ENST00000550221.1

AC007424.1-204, humanhuman

TSL 3

Gene AC007424.1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007424.1-204ENST00000550221 AEBP2Q6ZN18 517 aaPredicted RBP27.04■■□□□ 1.92
AC007424.1-204ENST00000550221 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
AC007424.1-204ENST00000550221 SENP3Q9H4L4 574 aaPredicted RBP23.1■■□□□ 1.29
AC007424.1-204ENST00000550221 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
AC007424.1-204ENST00000550221 FOXD1Q16676 465 aa21.42■■□□□ 1.02
AC007424.1-204ENST00000550221 PLPPR3Q6T4P5 718 aa21.05■□□□□ 0.96
AC007424.1-204ENST00000550221 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
AC007424.1-204ENST00000550221 ADRA2BP18089 450 aa20.26■□□□□ 0.83
AC007424.1-204ENST00000550221 PIAS4Q8N2W9 510 aaPredicted RBP20.14■□□□□ 0.81
AC007424.1-204ENST00000550221 MSH5O43196 834 aa19.98■□□□□ 0.79
AC007424.1-204ENST00000550221 POTEDQ86YR6 584 aa18.79■□□□□ 0.6
AC007424.1-204ENST00000550221 SCAF1Q9H7N4 1312 aaKnown RBP18.64■□□□□ 0.57
AC007424.1-204ENST00000550221 MAPK8IP2Q13387 824 aaPredicted RBP18.47■□□□□ 0.55
AC007424.1-204ENST00000550221 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
AC007424.1-204ENST00000550221 DMRT2Q9Y5R5 561 aa18.36■□□□□ 0.53
AC007424.1-204ENST00000550221 CNKSR2Q8WXI2 1034 aa18.07■□□□□ 0.48
AC007424.1-204ENST00000550221 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
AC007424.1-204ENST00000550221 HOXD11P31277 338 aaPredicted RBP17.83■□□□□ 0.44
AC007424.1-204ENST00000550221 RNF216Q9NWF9 866 aaPredicted RBP17.81■□□□□ 0.44
AC007424.1-204ENST00000550221 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
AC007424.1-204ENST00000550221 KCNA4P22459 653 aa17.59■□□□□ 0.41
AC007424.1-204ENST00000550221 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
AC007424.1-204ENST00000550221 DNAJC5BQ9UF47 199 aa17.22■□□□□ 0.35
AC007424.1-204ENST00000550221 RNF39Q9H2S5 420 aa17.04■□□□□ 0.32
AC007424.1-204ENST00000550221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.99■□□□□ 0.31
AC007424.1-204ENST00000550221 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
AC007424.1-204ENST00000550221 C1QBPQ07021 282 aaKnown RBP16.85■□□□□ 0.29
AC007424.1-204ENST00000550221 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
AC007424.1-204ENST00000550221 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
AC007424.1-204ENST00000550221 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
AC007424.1-204ENST00000550221 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.39■□□□□ 0.21
AC007424.1-204ENST00000550221 HNRNPUL2Q1KMD3 747 aaKnown RBP16.39■□□□□ 0.21
AC007424.1-204ENST00000550221 FOXD4L1Q9NU39 408 aa16.35■□□□□ 0.21
AC007424.1-204ENST00000550221 APLP2Q06481 763 aa16.34■□□□□ 0.21
AC007424.1-204ENST00000550221 MYCNP04198 464 aaPredicted RBP16.33■□□□□ 0.2
AC007424.1-204ENST00000550221 SAMD1Q6SPF0 538 aaPredicted RBP16.3■□□□□ 0.2
AC007424.1-204ENST00000550221 CAPN15O75808 1086 aa16.27■□□□□ 0.2
AC007424.1-204ENST00000550221 SPINK5Q9NQ38 1064 aaPredicted RBP16.27■□□□□ 0.2
AC007424.1-204ENST00000550221 ZBTB22O15209 634 aa16.15■□□□□ 0.18
AC007424.1-204ENST00000550221 ZNF219Q9P2Y4 722 aaPredicted RBP16.13■□□□□ 0.17
AC007424.1-204ENST00000550221 TRHP20396 242 aaPredicted RBP16.09■□□□□ 0.17
AC007424.1-204ENST00000550221 DSG3P32926 999 aa16.07■□□□□ 0.16
AC007424.1-204ENST00000550221 ABCB7O75027 752 aa15.89■□□□□ 0.13
AC007424.1-204ENST00000550221 ATXN8OSP0DMR3 200 aa15.85■□□□□ 0.13
AC007424.1-204ENST00000550221 ATF5Q9Y2D1 282 aaPredicted RBP15.83■□□□□ 0.12
AC007424.1-204ENST00000550221 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
AC007424.1-204ENST00000550221 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
AC007424.1-204ENST00000550221 POLA2Q14181 598 aa15.74■□□□□ 0.11
AC007424.1-204ENST00000550221 ZBTB12Q9Y330 459 aaPredicted RBP15.53■□□□□ 0.08
AC007424.1-204ENST00000550221 RBM42Q9BTD8 480 aaKnown RBP15.39■□□□□ 0.05
AC007424.1-204ENST00000550221 FBLN2P98095 1184 aa15.29■□□□□ 0.04
AC007424.1-204ENST00000550221 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
AC007424.1-204ENST00000550221 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
AC007424.1-204ENST00000550221 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
AC007424.1-204ENST00000550221 SPDYE2BA6NHP3 402 aa15.05■□□□□ -0
AC007424.1-204ENST00000550221 SPDYE6P0CI01 402 aa15.05■□□□□ -0
AC007424.1-204ENST00000550221 SPDYE2Q495Y8 402 aa15.05■□□□□ -0
AC007424.1-204ENST00000550221 REM2Q8IYK8 340 aaPredicted RBP14.92□□□□□ -0.02
AC007424.1-204ENST00000550221 ZNF692Q9BU19 519 aaPredicted RBP14.91□□□□□ -0.02
AC007424.1-204ENST00000550221 SSUH2Q9Y2M2 353 aa14.87□□□□□ -0.03
AC007424.1-204ENST00000550221 CHRDL2Q6WN34 429 aa14.86□□□□□ -0.03
AC007424.1-204ENST00000550221 POTEHQ6S545 545 aa14.81□□□□□ -0.04
AC007424.1-204ENST00000550221 PITPNM1O00562 1244 aa14.75□□□□□ -0.05
AC007424.1-204ENST00000550221 SPDYE1Q8NFV5 336 aaPredicted RBP14.7□□□□□ -0.06
AC007424.1-204ENST00000550221 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
AC007424.1-204ENST00000550221 SPDYE4A6NLX3 237 aa14.66□□□□□ -0.06
AC007424.1-204ENST00000550221 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
AC007424.1-204ENST00000550221 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
AC007424.1-204ENST00000550221 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.08
AC007424.1-204ENST00000550221 PRR29P0C7W0 189 aa14.45□□□□□ -0.1
AC007424.1-204ENST00000550221 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
AC007424.1-204ENST00000550221 PRKAR2AP13861 404 aaKnown RBP14.38□□□□□ -0.11
AC007424.1-204ENST00000550221 PROM2Q8N271 834 aa14.37□□□□□ -0.11
AC007424.1-204ENST00000550221 FKBP8Q14318 412 aa14.3□□□□□ -0.12
AC007424.1-204ENST00000550221 CHADLQ6NUI6 762 aa14.26□□□□□ -0.13
AC007424.1-204ENST00000550221 HAX1O00165 279 aa14.21□□□□□ -0.13
AC007424.1-204ENST00000550221 CREBZFQ9NS37 354 aa14.15□□□□□ -0.14
AC007424.1-204ENST00000550221 FARP1Q9Y4F1 1045 aaPredicted RBP14.13□□□□□ -0.15
AC007424.1-204ENST00000550221 C19orf67A6NJJ6 358 aa14.08□□□□□ -0.16
AC007424.1-204ENST00000550221 SP7Q8TDD2 431 aaPredicted RBP14.07□□□□□ -0.16
AC007424.1-204ENST00000550221 EVX2Q03828 476 aa14□□□□□ -0.17
AC007424.1-204ENST00000550221 PLEKHG5O94827 1062 aa13.97□□□□□ -0.17
AC007424.1-204ENST00000550221 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
AC007424.1-204ENST00000550221 CD44P16070 742 aaKnown RBP13.96□□□□□ -0.17
AC007424.1-204ENST00000550221 FBXO3Q9UK99 471 aa13.96□□□□□ -0.17
AC007424.1-204ENST00000550221 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
AC007424.1-204ENST00000550221 MIER1Q8N108 512 aa13.95□□□□□ -0.18
AC007424.1-204ENST00000550221 PLCD3Q8N3E9 789 aa13.9□□□□□ -0.18
AC007424.1-204ENST00000550221 PAK3O75914 559 aaPredicted RBP13.84□□□□□ -0.19
AC007424.1-204ENST00000550221 ZBTB47Q9UFB7 747 aaPredicted RBP13.82□□□□□ -0.2
AC007424.1-204ENST00000550221 ZRANB1Q9UGI0 708 aa13.81□□□□□ -0.2
AC007424.1-204ENST00000550221 CLCN6P51797 869 aa13.78□□□□□ -0.2
AC007424.1-204ENST00000550221 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
AC007424.1-204ENST00000550221 GABBR2O75899 941 aa13.76□□□□□ -0.21
AC007424.1-204ENST00000550221 VASPP50552 380 aaPredicted RBP13.74□□□□□ -0.21
AC007424.1-204ENST00000550221 TSPYL2Q9H2G4 693 aaPredicted RBP13.66□□□□□ -0.22
AC007424.1-204ENST00000550221 RASEFQ8IZ41 740 aa13.63□□□□□ -0.23
AC007424.1-204ENST00000550221 PHF12Q96QT6 1004 aa13.63□□□□□ -0.23
AC007424.1-204ENST00000550221 NUBP1P53384 320 aa13.62□□□□□ -0.23
AC007424.1-204ENST00000550221 KLHL34Q8N239 644 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms