RNA–Protein interactions for RNA: ENST00000550170.5

KRT8-213, Transcript of keratin 8, humanhuman

TSL 5

Gene KRT8, Length 2,202 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT8-213ENST00000550170 NISCHQ9Y2I1 1504 aa37.81■■■■□ 3.64
KRT8-213ENST00000550170 CCDC180Q9P1Z9 1646 aa32.39■■■□□ 2.77
KRT8-213ENST00000550170 ZCCHC6Q5VYS8 1495 aaKnown RBP32■■■□□ 2.71
KRT8-213ENST00000550170 SHROOM4Q9ULL8 1493 aa31.7■■■□□ 2.66
KRT8-213ENST00000550170 DCAF1Q9Y4B6 1507 aa31.23■■■□□ 2.59
KRT8-213ENST00000550170 SUPT5HO00267 1087 aaKnown RBP31.02■■■□□ 2.56
KRT8-213ENST00000550170 DCAF8L2P0C7V8 631 aa30.87■■■□□ 2.53
KRT8-213ENST00000550170 MYO15BQ96JP2 1530 aa30.43■■■□□ 2.46
KRT8-213ENST00000550170 CHIC1Q5VXU3 224 aa30.31■■■□□ 2.44
KRT8-213ENST00000550170 ABCC9O60706 1549 aa30.17■■■□□ 2.42
KRT8-213ENST00000550170 SCRIBQ14160 1630 aa30.02■■■□□ 2.4
KRT8-213ENST00000550170 NACADO15069 1562 aa29.91■■■□□ 2.38
KRT8-213ENST00000550170 RSF1Q96T23 1441 aaPredicted RBP29.8■■■□□ 2.36
KRT8-213ENST00000550170 RB1CC1Q8TDY2 1594 aa29.53■■■□□ 2.32
KRT8-213ENST00000550170 CECR2Q9BXF3 1484 aa29.36■■■□□ 2.29
KRT8-213ENST00000550170 MROH2BQ7Z745 1585 aa29.3■■■□□ 2.28
KRT8-213ENST00000550170 LOC105371045A0A1W2PR82 267 aa29.22■■■□□ 2.27
KRT8-213ENST00000550170 WIZO95785 1651 aa29.12■■■□□ 2.25
KRT8-213ENST00000550170 HRCP23327 699 aa29.12■■■□□ 2.25
KRT8-213ENST00000550170 BAZ1AQ9NRL2 1556 aaPredicted RBP29.07■■■□□ 2.24
KRT8-213ENST00000550170 TRIM41Q8WV44 630 aa29.04■■■□□ 2.24
KRT8-213ENST00000550170 PCGF6Q9BYE7 350 aa29.03■■■□□ 2.24
KRT8-213ENST00000550170 UNC13AQ9UPW8 1703 aa28.95■■■□□ 2.22
KRT8-213ENST00000550170 EIF4G1Q04637 1599 aaKnown RBP28.86■■■□□ 2.21
KRT8-213ENST00000550170 SMARCA4P51532 1647 aa28.83■■■□□ 2.21
KRT8-213ENST00000550170 TOP2AP11388 1531 aaKnown RBP28.79■■■□□ 2.2
KRT8-213ENST00000550170 TRIM26Q12899 539 aaPredicted RBP28.71■■■□□ 2.19
KRT8-213ENST00000550170 FAM9AQ8IZU1 332 aaPredicted RBP28.59■■■□□ 2.17
KRT8-213ENST00000550170 SMARCA2P51531 1590 aa28.59■■■□□ 2.17
KRT8-213ENST00000550170 BICRAQ9NZM4 1560 aa28.59■■■□□ 2.17
KRT8-213ENST00000550170 CCDC88BA6NC98 1476 aa28.56■■■□□ 2.16
KRT8-213ENST00000550170 PEG3Q9GZU2 1588 aa28.43■■■□□ 2.14
KRT8-213ENST00000550170 ABCC8Q09428 1581 aa28.34■■■□□ 2.13
KRT8-213ENST00000550170 PPARGC1BQ86YN6 1023 aaKnown RBP28.3■■■□□ 2.12
KRT8-213ENST00000550170 PABPN1Q86U42 306 aaKnown RBP eCLIP28.28■■■□□ 2.121e-7■□□□□ 9.2
KRT8-213ENST00000550170 EHMT2Q96KQ7 1210 aa28.17■■■□□ 2.1
KRT8-213ENST00000550170 EEA1Q15075 1411 aa28.12■■■□□ 2.09
KRT8-213ENST00000550170 ZEB1P37275 1124 aaPredicted RBP28.1■■■□□ 2.09
KRT8-213ENST00000550170 ATAD2BQ9ULI0 1458 aa28.1■■■□□ 2.09
KRT8-213ENST00000550170 SOGA1O94964 1423 aa28.05■■■□□ 2.08
KRT8-213ENST00000550170 WRNQ14191 1432 aaPredicted RBP eCLIP27.99■■■□□ 2.07
KRT8-213ENST00000550170 BAZ1BQ9UIG0 1483 aaKnown RBP27.97■■■□□ 2.07
KRT8-213ENST00000550170 TNIKQ9UKE5 1360 aa27.97■■■□□ 2.07
KRT8-213ENST00000550170 CEP162Q5TB80 1403 aa27.91■■■□□ 2.06
KRT8-213ENST00000550170 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
KRT8-213ENST00000550170 CSRNP3Q8WYN3 585 aa27.9■■■□□ 2.06
KRT8-213ENST00000550170 SYNJ1O43426 1573 aa27.86■■■□□ 2.05
KRT8-213ENST00000550170 GOLGA3Q08378 1498 aa27.81■■■□□ 2.04
KRT8-213ENST00000550170 KIF21BO75037 1637 aa27.74■■■□□ 2.03
KRT8-213ENST00000550170 CEP164Q9UPV0 1460 aa27.69■■■□□ 2.02
KRT8-213ENST00000550170 HMGXB3Q12766 1538 aa27.68■■■□□ 2.02
KRT8-213ENST00000550170 NCAPD3P42695 1498 aa27.64■■■□□ 2.02
KRT8-213ENST00000550170 UBTFP17480 764 aaKnown RBP27.63■■■□□ 2.01
KRT8-213ENST00000550170 TOP2BQ02880 1626 aa27.62■■■□□ 2.01
KRT8-213ENST00000550170 BIVM-ERCC5R4GMW8 1640 aa27.57■■■□□ 2
KRT8-213ENST00000550170 CLIP1P30622 1438 aa27.42■■□□□ 1.98
KRT8-213ENST00000550170 RAPGEF2Q9Y4G8 1499 aa27.42■■□□□ 1.98
KRT8-213ENST00000550170 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.41■■□□□ 1.98
KRT8-213ENST00000550170 CCER1Q8TC90 406 aaPredicted RBP27.37■■□□□ 1.97
KRT8-213ENST00000550170 CFTRP13569 1480 aa27.35■■□□□ 1.97
KRT8-213ENST00000550170 VPS8Q8N3P4 1428 aa27.35■■□□□ 1.97
KRT8-213ENST00000550170 ERICH3Q5RHP9 1530 aa27.33■■□□□ 1.97
KRT8-213ENST00000550170 CUX1P39880 1505 aa27.32■■□□□ 1.96
KRT8-213ENST00000550170 PRXQ9BXM0 1461 aa27.3■■□□□ 1.96
KRT8-213ENST00000550170 TTBK1Q5TCY1 1321 aaPredicted RBP27.27■■□□□ 1.96
KRT8-213ENST00000550170 PRDM2Q13029 1718 aa27.25■■□□□ 1.95
KRT8-213ENST00000550170 KIF27Q86VH2 1401 aa27.14■■□□□ 1.94
KRT8-213ENST00000550170 ARAP1Q96P48 1450 aa27.06■■□□□ 1.92
KRT8-213ENST00000550170 APLP2Q06481 763 aa27.02■■□□□ 1.92
KRT8-213ENST00000550170 CADPSQ9ULU8 1353 aa27.01■■□□□ 1.92
KRT8-213ENST00000550170 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
KRT8-213ENST00000550170 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
KRT8-213ENST00000550170 HNRNPUL2Q1KMD3 747 aaKnown RBP26.87■■□□□ 1.89
KRT8-213ENST00000550170 CUX2O14529 1486 aa26.85■■□□□ 1.89
KRT8-213ENST00000550170 IGF1RP08069 1367 aa26.84■■□□□ 1.89
KRT8-213ENST00000550170 ARHGAP35Q9NRY4 1499 aa26.84■■□□□ 1.89
KRT8-213ENST00000550170 FGD5Q6ZNL6 1462 aa26.82■■□□□ 1.88
KRT8-213ENST00000550170 DIEXFQ68CQ4 756 aaKnown RBP26.79■■□□□ 1.88
KRT8-213ENST00000550170 RRBP1Q9P2E9 1410 aaKnown RBP26.74■■□□□ 1.87
KRT8-213ENST00000550170 KANK4Q5T7N3 995 aaPredicted RBP26.73■■□□□ 1.87
KRT8-213ENST00000550170 FANCD2Q9BXW9 1451 aa26.72■■□□□ 1.87
KRT8-213ENST00000550170 ZNF316A6NFI3 1004 aaPredicted RBP26.71■■□□□ 1.87
KRT8-213ENST00000550170 CARMIL1Q5VZK9 1371 aa26.7■■□□□ 1.86
KRT8-213ENST00000550170 DNMBPQ6XZF7 1577 aa26.68■■□□□ 1.86
KRT8-213ENST00000550170 MAP3K1Q13233 1512 aa26.66■■□□□ 1.86
KRT8-213ENST00000550170 CLSPNQ9HAW4 1339 aa26.65■■□□□ 1.86
KRT8-213ENST00000550170 SCAF1Q9H7N4 1312 aaKnown RBP26.62■■□□□ 1.85
KRT8-213ENST00000550170 ABCA10Q8WWZ4 1543 aa26.6■■□□□ 1.85
KRT8-213ENST00000550170 TOPBP1Q92547 1522 aa26.58■■□□□ 1.84
KRT8-213ENST00000550170 DHX57Q6P158 1386 aaKnown RBP26.56■■□□□ 1.84
KRT8-213ENST00000550170 TIAM1Q13009 1591 aa26.56■■□□□ 1.84
KRT8-213ENST00000550170 POLA1P09884 1462 aaPredicted RBP26.54■■□□□ 1.84
KRT8-213ENST00000550170 CCNB3Q8WWL7 1395 aa26.54■■□□□ 1.84
KRT8-213ENST00000550170 ACIN1Q9UKV3 1341 aaKnown RBP26.51■■□□□ 1.83
KRT8-213ENST00000550170 RAD54L2Q9Y4B4 1467 aa26.49■■□□□ 1.83
KRT8-213ENST00000550170 LAMC3Q9Y6N6 1575 aa26.48■■□□□ 1.83
KRT8-213ENST00000550170 NESP48681 1621 aa26.48■■□□□ 1.83
KRT8-213ENST00000550170 CUL7Q14999 1698 aa26.48■■□□□ 1.83
KRT8-213ENST00000550170 FHAD1B1AJZ9 1412 aa26.47■■□□□ 1.83
KRT8-213ENST00000550170 CFAP43Q8NDM7 1665 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms