RNA–Protein interactions for RNA: ENST00000549523.5

USP15-215, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-215ENST00000549523 NISCHQ9Y2I1 1504 aa30.26■■■□□ 2.43
USP15-215ENST00000549523 ABCC9O60706 1549 aa27.92■■■□□ 2.06
USP15-215ENST00000549523 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
USP15-215ENST00000549523 DNAJC5BQ9UF47 199 aa26.88■■□□□ 1.89
USP15-215ENST00000549523 RB1CC1Q8TDY2 1594 aa26.29■■□□□ 1.8
USP15-215ENST00000549523 NACADO15069 1562 aa25.99■■□□□ 1.75
USP15-215ENST00000549523 PABPN1Q86U42 306 aaKnown RBP eCLIP25.9■■□□□ 1.74
USP15-215ENST00000549523 UNC13AQ9UPW8 1703 aa25.7■■□□□ 1.7
USP15-215ENST00000549523 BICRAQ9NZM4 1560 aa25.67■■□□□ 1.7
USP15-215ENST00000549523 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
USP15-215ENST00000549523 MYO15BQ96JP2 1530 aa25.52■■□□□ 1.68
USP15-215ENST00000549523 DNAJC5Q9H3Z4 198 aa25.32■■□□□ 1.64
USP15-215ENST00000549523 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
USP15-215ENST00000549523 SHROOM4Q9ULL8 1493 aa25.2■■□□□ 1.62
USP15-215ENST00000549523 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
USP15-215ENST00000549523 EIF4G1Q04637 1599 aaKnown RBP25.02■■□□□ 1.6
USP15-215ENST00000549523 ZCCHC6Q5VYS8 1495 aaKnown RBP24.99■■□□□ 1.59
USP15-215ENST00000549523 DCAF1Q9Y4B6 1507 aa24.97■■□□□ 1.59
USP15-215ENST00000549523 SCRIBQ14160 1630 aa24.89■■□□□ 1.57
USP15-215ENST00000549523 CUX2O14529 1486 aa24.42■■□□□ 1.5
USP15-215ENST00000549523 ERCC6Q03468 1493 aa24.16■■□□□ 1.46
USP15-215ENST00000549523 NCAPD3P42695 1498 aa24.07■■□□□ 1.44
USP15-215ENST00000549523 ATAD2BQ9ULI0 1458 aa23.91■■□□□ 1.42
USP15-215ENST00000549523 NESP48681 1621 aa23.87■■□□□ 1.41
USP15-215ENST00000549523 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
USP15-215ENST00000549523 HMGXB3Q12766 1538 aa23.81■■□□□ 1.4
USP15-215ENST00000549523 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
USP15-215ENST00000549523 SMARCA2P51531 1590 aa23.74■■□□□ 1.39
USP15-215ENST00000549523 SMARCA4P51532 1647 aa23.71■■□□□ 1.39
USP15-215ENST00000549523 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.37
USP15-215ENST00000549523 LAMC3Q9Y6N6 1575 aa23.54■■□□□ 1.36
USP15-215ENST00000549523 PEG3Q9GZU2 1588 aa23.53■■□□□ 1.36
USP15-215ENST00000549523 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
USP15-215ENST00000549523 KIF21AQ7Z4S6 1674 aa23.47■■□□□ 1.35
USP15-215ENST00000549523 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
USP15-215ENST00000549523 MROH2BQ7Z745 1585 aa23.33■■□□□ 1.33
USP15-215ENST00000549523 MRC2Q9UBG0 1479 aa23.29■■□□□ 1.32
USP15-215ENST00000549523 WDR62O43379 1518 aa23.28■■□□□ 1.32
USP15-215ENST00000549523 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.32
USP15-215ENST00000549523 OSCARQ8IYS5 282 aa23.11■■□□□ 1.29
USP15-215ENST00000549523 CEP164Q9UPV0 1460 aa23.05■■□□□ 1.28
USP15-215ENST00000549523 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
USP15-215ENST00000549523 WIZO95785 1651 aa22.97■■□□□ 1.27
USP15-215ENST00000549523 RIMBP3CA6NJZ7 1639 aa22.96■■□□□ 1.27
USP15-215ENST00000549523 RIMBP3BA6NNM3 1639 aa22.96■■□□□ 1.27
USP15-215ENST00000549523 RIMBP3Q9UFD9 1639 aa22.96■■□□□ 1.27
USP15-215ENST00000549523 CFTRP13569 1480 aa22.92■■□□□ 1.26
USP15-215ENST00000549523 URB2Q14146 1524 aaKnown RBP22.9■■□□□ 1.26
USP15-215ENST00000549523 ARHGEF11O15085 1522 aa22.8■■□□□ 1.24
USP15-215ENST00000549523 ZNF608Q9ULD9 1512 aaPredicted RBP22.72■■□□□ 1.23
USP15-215ENST00000549523 TOP2AP11388 1531 aaKnown RBP22.66■■□□□ 1.22
USP15-215ENST00000549523 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
USP15-215ENST00000549523 TRHP20396 242 aaPredicted RBP22.64■■□□□ 1.21
USP15-215ENST00000549523 IFT140Q96RY7 1462 aa22.63■■□□□ 1.21
USP15-215ENST00000549523 CYB5RLQ6IPT4 315 aa22.62■■□□□ 1.21
USP15-215ENST00000549523 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
USP15-215ENST00000549523 ARAP1Q96P48 1450 aa22.52■■□□□ 1.2
USP15-215ENST00000549523 TOPBP1Q92547 1522 aa22.52■■□□□ 1.19
USP15-215ENST00000549523 PRDM2Q13029 1718 aa22.51■■□□□ 1.19
USP15-215ENST00000549523 EIF4G3O43432 1585 aaKnown RBP22.51■■□□□ 1.19
USP15-215ENST00000549523 CCDC88BA6NC98 1476 aa22.42■■□□□ 1.18
USP15-215ENST00000549523 CHD1O14646 1710 aa22.4■■□□□ 1.18
USP15-215ENST00000549523 AQRO60306 1485 aaKnown RBP eCLIP22.4■■□□□ 1.182e-8■■■■□ 20.3
USP15-215ENST00000549523 TARBP1Q13395 1621 aaKnown RBP22.38■■□□□ 1.17
USP15-215ENST00000549523 DNMBPQ6XZF7 1577 aa22.36■■□□□ 1.17
USP15-215ENST00000549523 ABCC8Q09428 1581 aa22.35■■□□□ 1.17
USP15-215ENST00000549523 POLA1P09884 1462 aaPredicted RBP22.27■■□□□ 1.16
USP15-215ENST00000549523 FBLN2P98095 1184 aa22.23■■□□□ 1.15
USP15-215ENST00000549523 CLASP1Q7Z460 1538 aa22.22■■□□□ 1.15
USP15-215ENST00000549523 RAD54L2Q9Y4B4 1467 aa22.19■■□□□ 1.14
USP15-215ENST00000549523 TDRD9Q8NDG6 1382 aaKnown RBP22.16■■□□□ 1.14
USP15-215ENST00000549523 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
USP15-215ENST00000549523 SOGA1O94964 1423 aa22.09■■□□□ 1.13
USP15-215ENST00000549523 SYNJ1O43426 1573 aa22.06■■□□□ 1.12
USP15-215ENST00000549523 WDR97A6NE52 1622 aa22.06■■□□□ 1.12
USP15-215ENST00000549523 MAGI1Q96QZ7 1491 aaPredicted RBP22.04■■□□□ 1.12
USP15-215ENST00000549523 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
USP15-215ENST00000549523 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
USP15-215ENST00000549523 SYNJ2O15056 1496 aa21.99■■□□□ 1.11
USP15-215ENST00000549523 GRIN2BQ13224 1484 aa21.98■■□□□ 1.11
USP15-215ENST00000549523 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
USP15-215ENST00000549523 CUX1P39880 1505 aa21.95■■□□□ 1.1
USP15-215ENST00000549523 ERCC6L2Q5T890 1561 aa21.86■■□□□ 1.09
USP15-215ENST00000549523 PBRM1Q86U86 1689 aa21.82■■□□□ 1.08
USP15-215ENST00000549523 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
USP15-215ENST00000549523 ABCA10Q8WWZ4 1543 aa21.75■■□□□ 1.07
USP15-215ENST00000549523 ILDR1Q86SU0 546 aaPredicted RBP21.75■■□□□ 1.07
USP15-215ENST00000549523 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
USP15-215ENST00000549523 NUP160Q12769 1436 aa21.72■■□□□ 1.07
USP15-215ENST00000549523 KIF13AQ9H1H9 1805 aa21.71■■□□□ 1.07
USP15-215ENST00000549523 CEP170Q5SW79 1584 aa21.71■■□□□ 1.07
USP15-215ENST00000549523 SHROOM2Q13796 1616 aa21.66■■□□□ 1.06
USP15-215ENST00000549523 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
USP15-215ENST00000549523 KDM4FA0A1W2PPD8 638 aa21.54■■□□□ 1.04
USP15-215ENST00000549523 FHAD1B1AJZ9 1412 aa21.54■■□□□ 1.04
USP15-215ENST00000549523 WRNQ14191 1432 aaPredicted RBP eCLIP21.5■■□□□ 1.03
USP15-215ENST00000549523 ABCC10Q5T3U5 1492 aa21.49■■□□□ 1.03
USP15-215ENST00000549523 PRG4Q92954 1404 aaPredicted RBP21.48■■□□□ 1.03
USP15-215ENST00000549523 ERICH3Q5RHP9 1530 aa21.44■■□□□ 1.02
USP15-215ENST00000549523 FAM69CQ0P6D2 419 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms