RNA–Protein interactions for RNA: ENST00000549163.1

AC009387.1-201, humanhuman

TSL 3 BASIC

Gene AC009387.1, Length 441 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009387.1-201ENST00000549163 AEBP2Q6ZN18 517 aaPredicted RBP19.29■□□□□ 0.68
AC009387.1-201ENST00000549163 CHIC1Q5VXU3 224 aa19.22■□□□□ 0.67
AC009387.1-201ENST00000549163 PHF23Q9BUL5 403 aaPredicted RBP17.02■□□□□ 0.32
AC009387.1-201ENST00000549163 NISCHQ9Y2I1 1504 aa16.6■□□□□ 0.25
AC009387.1-201ENST00000549163 SENP3Q9H4L4 574 aaPredicted RBP16.16■□□□□ 0.18
AC009387.1-201ENST00000549163 PLPPR3Q6T4P5 718 aa15.78■□□□□ 0.12
AC009387.1-201ENST00000549163 ABCC9O60706 1549 aa15.07■□□□□ 0
AC009387.1-201ENST00000549163 FOXD1Q16676 465 aa15.03■□□□□ -0
AC009387.1-201ENST00000549163 CCDC180Q9P1Z9 1646 aa14.99□□□□□ -0.01
AC009387.1-201ENST00000549163 ADRA2BP18089 450 aa14.91□□□□□ -0.02
AC009387.1-201ENST00000549163 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
AC009387.1-201ENST00000549163 RB1CC1Q8TDY2 1594 aa14.33□□□□□ -0.12
AC009387.1-201ENST00000549163 KCNA4P22459 653 aa14.29□□□□□ -0.12
AC009387.1-201ENST00000549163 PIAS4Q8N2W9 510 aaPredicted RBP14.27□□□□□ -0.13
AC009387.1-201ENST00000549163 DNAJC5BQ9UF47 199 aa14.24□□□□□ -0.13
AC009387.1-201ENST00000549163 NACADO15069 1562 aa14.19□□□□□ -0.14
AC009387.1-201ENST00000549163 PPP4R3CPQ6ZMV5 832 aa14.02□□□□□ -0.17
AC009387.1-201ENST00000549163 DCAF8L2P0C7V8 631 aa13.99□□□□□ -0.17
AC009387.1-201ENST00000549163 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
AC009387.1-201ENST00000549163 MYO15BQ96JP2 1530 aa13.98□□□□□ -0.17
AC009387.1-201ENST00000549163 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
AC009387.1-201ENST00000549163 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
AC009387.1-201ENST00000549163 BICRAQ9NZM4 1560 aa13.9□□□□□ -0.18
AC009387.1-201ENST00000549163 SHROOM4Q9ULL8 1493 aa13.75□□□□□ -0.21
AC009387.1-201ENST00000549163 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
AC009387.1-201ENST00000549163 DCAF1Q9Y4B6 1507 aa13.73□□□□□ -0.21
AC009387.1-201ENST00000549163 NCBP3Q53F19 620 aaKnown RBP13.69□□□□□ -0.22
AC009387.1-201ENST00000549163 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
AC009387.1-201ENST00000549163 CC2D2AQ9P2K1 1620 aa13.63□□□□□ -0.23
AC009387.1-201ENST00000549163 NPM3O75607 178 aaKnown RBP13.61□□□□□ -0.23
AC009387.1-201ENST00000549163 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
AC009387.1-201ENST00000549163 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
AC009387.1-201ENST00000549163 EIF4G1Q04637 1599 aaKnown RBP13.58□□□□□ -0.24
AC009387.1-201ENST00000549163 MSH5O43196 834 aa13.56□□□□□ -0.24
AC009387.1-201ENST00000549163 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
AC009387.1-201ENST00000549163 CSRNP3Q8WYN3 585 aa13.47□□□□□ -0.25
AC009387.1-201ENST00000549163 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
AC009387.1-201ENST00000549163 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
AC009387.1-201ENST00000549163 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
AC009387.1-201ENST00000549163 ZBTB22O15209 634 aa13.2□□□□□ -0.3
AC009387.1-201ENST00000549163 CUX2O14529 1486 aa13.1□□□□□ -0.31
AC009387.1-201ENST00000549163 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
AC009387.1-201ENST00000549163 RNF216Q9NWF9 866 aaPredicted RBP13.08□□□□□ -0.32
AC009387.1-201ENST00000549163 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
AC009387.1-201ENST00000549163 ATAD2BQ9ULI0 1458 aa13.03□□□□□ -0.32
AC009387.1-201ENST00000549163 HMGXB3Q12766 1538 aa13□□□□□ -0.33
AC009387.1-201ENST00000549163 DMRT2Q9Y5R5 561 aa13□□□□□ -0.33
AC009387.1-201ENST00000549163 SMARCA2P51531 1590 aa12.99□□□□□ -0.33
AC009387.1-201ENST00000549163 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
AC009387.1-201ENST00000549163 FOXD4L1Q9NU39 408 aa12.95□□□□□ -0.34
AC009387.1-201ENST00000549163 HOXD11P31277 338 aaPredicted RBP12.92□□□□□ -0.34
AC009387.1-201ENST00000549163 BAZ1AQ9NRL2 1556 aaPredicted RBP12.91□□□□□ -0.34
AC009387.1-201ENST00000549163 NESP48681 1621 aa12.91□□□□□ -0.34
AC009387.1-201ENST00000549163 BAZ1BQ9UIG0 1483 aaKnown RBP12.9□□□□□ -0.34
AC009387.1-201ENST00000549163 PEG3Q9GZU2 1588 aa12.88□□□□□ -0.35
AC009387.1-201ENST00000549163 THOC2Q8NI27 1593 aaKnown RBP12.85□□□□□ -0.35
AC009387.1-201ENST00000549163 LAMC3Q9Y6N6 1575 aa12.85□□□□□ -0.35
AC009387.1-201ENST00000549163 MROH2BQ7Z745 1585 aa12.77□□□□□ -0.37
AC009387.1-201ENST00000549163 SLC4A2P04920 1241 aa12.75□□□□□ -0.37
AC009387.1-201ENST00000549163 KIF21AQ7Z4S6 1674 aa12.75□□□□□ -0.37
AC009387.1-201ENST00000549163 PDS5BQ9NTI5 1447 aa12.75□□□□□ -0.37
AC009387.1-201ENST00000549163 CADPSQ9ULU8 1353 aa12.68□□□□□ -0.38
AC009387.1-201ENST00000549163 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.38
AC009387.1-201ENST00000549163 WDR62O43379 1518 aa12.64□□□□□ -0.39
AC009387.1-201ENST00000549163 WIZO95785 1651 aa12.61□□□□□ -0.39
AC009387.1-201ENST00000549163 CEP164Q9UPV0 1460 aa12.57□□□□□ -0.4
AC009387.1-201ENST00000549163 TRIM41Q8WV44 630 aa12.55□□□□□ -0.4
AC009387.1-201ENST00000549163 FANCD2Q9BXW9 1451 aa12.53□□□□□ -0.4
AC009387.1-201ENST00000549163 CFTRP13569 1480 aa12.51□□□□□ -0.41
AC009387.1-201ENST00000549163 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
AC009387.1-201ENST00000549163 DCAF8L1A6NGE4 600 aa12.47□□□□□ -0.41
AC009387.1-201ENST00000549163 TOP2AP11388 1531 aaKnown RBP12.47□□□□□ -0.41
AC009387.1-201ENST00000549163 RSF1Q96T23 1441 aaPredicted RBP12.45□□□□□ -0.42
AC009387.1-201ENST00000549163 URB2Q14146 1524 aaKnown RBP12.43□□□□□ -0.42
AC009387.1-201ENST00000549163 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
AC009387.1-201ENST00000549163 PRDM2Q13029 1718 aa12.39□□□□□ -0.43
AC009387.1-201ENST00000549163 ATXN8OSP0DMR3 200 aa12.37□□□□□ -0.43
AC009387.1-201ENST00000549163 IFT140Q96RY7 1462 aa12.33□□□□□ -0.44
AC009387.1-201ENST00000549163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.32□□□□□ -0.44
AC009387.1-201ENST00000549163 RIMBP3CA6NJZ7 1639 aa12.31□□□□□ -0.44
AC009387.1-201ENST00000549163 RIMBP3BA6NNM3 1639 aa12.31□□□□□ -0.44
AC009387.1-201ENST00000549163 RIMBP3Q9UFD9 1639 aa12.31□□□□□ -0.44
AC009387.1-201ENST00000549163 CCDC88BA6NC98 1476 aa12.3□□□□□ -0.44
AC009387.1-201ENST00000549163 ZNF608Q9ULD9 1512 aaPredicted RBP12.29□□□□□ -0.44
AC009387.1-201ENST00000549163 TOPBP1Q92547 1522 aa12.28□□□□□ -0.44
AC009387.1-201ENST00000549163 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
AC009387.1-201ENST00000549163 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
AC009387.1-201ENST00000549163 ARHGEF11O15085 1522 aa12.26□□□□□ -0.45
AC009387.1-201ENST00000549163 EIF4G3O43432 1585 aaKnown RBP12.26□□□□□ -0.45
AC009387.1-201ENST00000549163 DNMBPQ6XZF7 1577 aa12.24□□□□□ -0.45
AC009387.1-201ENST00000549163 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
AC009387.1-201ENST00000549163 TARBP1Q13395 1621 aaKnown RBP12.19□□□□□ -0.46
AC009387.1-201ENST00000549163 CHD1O14646 1710 aa12.17□□□□□ -0.46
AC009387.1-201ENST00000549163 AQRO60306 1485 aaKnown RBP eCLIP12.16□□□□□ -0.46
AC009387.1-201ENST00000549163 POLA1P09884 1462 aaPredicted RBP12.14□□□□□ -0.47
AC009387.1-201ENST00000549163 FKBP8Q14318 412 aa12.14□□□□□ -0.47
AC009387.1-201ENST00000549163 CYB5RLQ6IPT4 315 aa12.13□□□□□ -0.47
AC009387.1-201ENST00000549163 ARAP1Q96P48 1450 aa12.12□□□□□ -0.47
AC009387.1-201ENST00000549163 SAMD1Q6SPF0 538 aaPredicted RBP12.11□□□□□ -0.47
AC009387.1-201ENST00000549163 WDR97A6NE52 1622 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 377 ms