RNA–Protein interactions for RNA: ENST00000548909.5

ERGIC2-206, Transcript of ERGIC and golgi 2, humanhuman

TSL 5

Gene ERGIC2, Length 645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-206ENST00000548909 AEBP2Q6ZN18 517 aaPredicted RBP37.17■■■■□ 3.54
ERGIC2-206ENST00000548909 CHIC1Q5VXU3 224 aa34.85■■■■□ 3.17
ERGIC2-206ENST00000548909 SENP3Q9H4L4 574 aaPredicted RBP31.87■■■□□ 2.69
ERGIC2-206ENST00000548909 PHF23Q9BUL5 403 aaPredicted RBP31.33■■■□□ 2.61
ERGIC2-206ENST00000548909 FOXD1Q16676 465 aa29.7■■■□□ 2.35
ERGIC2-206ENST00000548909 POTEDQ86YR6 584 aa28.23■■■□□ 2.11
ERGIC2-206ENST00000548909 MSH5O43196 834 aa28.09■■■□□ 2.09
ERGIC2-206ENST00000548909 PLPPR3Q6T4P5 718 aa27.62■■■□□ 2.01
ERGIC2-206ENST00000548909 PIAS4Q8N2W9 510 aaPredicted RBP27.6■■■□□ 2.01
ERGIC2-206ENST00000548909 PPP6R1Q9UPN7 881 aa27.34■■□□□ 1.97
ERGIC2-206ENST00000548909 ADRA2BP18089 450 aa27.19■■□□□ 1.94
ERGIC2-206ENST00000548909 DMRT2Q9Y5R5 561 aa25.19■■□□□ 1.62
ERGIC2-206ENST00000548909 MAPK8IP2Q13387 824 aaPredicted RBP25.12■■□□□ 1.61
ERGIC2-206ENST00000548909 SCAF1Q9H7N4 1312 aaKnown RBP25.02■■□□□ 1.6
ERGIC2-206ENST00000548909 CACNB1Q02641 598 aaPredicted RBP24.33■■□□□ 1.49
ERGIC2-206ENST00000548909 HOXD11P31277 338 aaPredicted RBP24.09■■□□□ 1.45
ERGIC2-206ENST00000548909 PPP4R3CPQ6ZMV5 832 aa24.09■■□□□ 1.45
ERGIC2-206ENST00000548909 DCAF8L1A6NGE4 600 aa24.02■■□□□ 1.44
ERGIC2-206ENST00000548909 RNF39Q9H2S5 420 aa23.89■■□□□ 1.41
ERGIC2-206ENST00000548909 CNKSR2Q8WXI2 1034 aa23.82■■□□□ 1.4
ERGIC2-206ENST00000548909 RNF216Q9NWF9 866 aaPredicted RBP23.76■■□□□ 1.39
ERGIC2-206ENST00000548909 C1QBPQ07021 282 aaKnown RBP23.55■■□□□ 1.36
ERGIC2-206ENST00000548909 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
ERGIC2-206ENST00000548909 NCBP3Q53F19 620 aaKnown RBP23.06■■□□□ 1.28
ERGIC2-206ENST00000548909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.84■■□□□ 1.25
ERGIC2-206ENST00000548909 NPM3O75607 178 aaKnown RBP22.67■■□□□ 1.22
ERGIC2-206ENST00000548909 U3KPZ7 1027 aaPredicted RBP22.33■■□□□ 1.17
ERGIC2-206ENST00000548909 DSG3P32926 999 aa22.17■■□□□ 1.14
ERGIC2-206ENST00000548909 SPINK5Q9NQ38 1064 aaPredicted RBP22.11■■□□□ 1.13
ERGIC2-206ENST00000548909 CAPN15O75808 1086 aa22.1■■□□□ 1.13
ERGIC2-206ENST00000548909 POTEHQ6S545 545 aa22.03■■□□□ 1.12
ERGIC2-206ENST00000548909 SLC4A2P04920 1241 aa21.79■■□□□ 1.08
ERGIC2-206ENST00000548909 APLP2Q06481 763 aa21.76■■□□□ 1.07
ERGIC2-206ENST00000548909 KCNA4P22459 653 aa21.71■■□□□ 1.07
ERGIC2-206ENST00000548909 ZNF219Q9P2Y4 722 aaPredicted RBP21.66■■□□□ 1.06
ERGIC2-206ENST00000548909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.61■■□□□ 1.05
ERGIC2-206ENST00000548909 HNRNPUL2Q1KMD3 747 aaKnown RBP21.61■■□□□ 1.05
ERGIC2-206ENST00000548909 TRHP20396 242 aaPredicted RBP21.6■■□□□ 1.05
ERGIC2-206ENST00000548909 ABCB7O75027 752 aa21.49■■□□□ 1.03
ERGIC2-206ENST00000548909 SAMD1Q6SPF0 538 aaPredicted RBP21.43■■□□□ 1.02
ERGIC2-206ENST00000548909 RBM42Q9BTD8 480 aaKnown RBP21.23■□□□□ 0.99
ERGIC2-206ENST00000548909 MYCNP04198 464 aaPredicted RBP21.02■□□□□ 0.96
ERGIC2-206ENST00000548909 POLA2Q14181 598 aa20.95■□□□□ 0.94
ERGIC2-206ENST00000548909 CHRDL2Q6WN34 429 aa20.9■□□□□ 0.94
ERGIC2-206ENST00000548909 AKT1S1Q96B36 256 aa20.62■□□□□ 0.89
ERGIC2-206ENST00000548909 ZBTB12Q9Y330 459 aaPredicted RBP20.59■□□□□ 0.89
ERGIC2-206ENST00000548909 FOXD4L1Q9NU39 408 aa20.5■□□□□ 0.87
ERGIC2-206ENST00000548909 ATF5Q9Y2D1 282 aaPredicted RBP20.48■□□□□ 0.87
ERGIC2-206ENST00000548909 SP7Q8TDD2 431 aaPredicted RBP20.42■□□□□ 0.86
ERGIC2-206ENST00000548909 SLC4A1APQ9BWU0 796 aaKnown RBP20.41■□□□□ 0.86
ERGIC2-206ENST00000548909 REM2Q8IYK8 340 aaPredicted RBP20.37■□□□□ 0.85
ERGIC2-206ENST00000548909 PIP4P2Q8N4L2 257 aa20.28■□□□□ 0.84
ERGIC2-206ENST00000548909 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
ERGIC2-206ENST00000548909 FXR2P51116 673 aaKnown RBP eCLIP20.14■□□□□ 0.81
ERGIC2-206ENST00000548909 PITPNM1O00562 1244 aa20.13■□□□□ 0.81
ERGIC2-206ENST00000548909 HAX1O00165 279 aa20.03■□□□□ 0.8
ERGIC2-206ENST00000548909 ATXN8OSP0DMR3 200 aa20.01■□□□□ 0.79
ERGIC2-206ENST00000548909 ZBTB22O15209 634 aa19.94■□□□□ 0.78
ERGIC2-206ENST00000548909 SPDYE2BA6NHP3 402 aa19.88■□□□□ 0.77
ERGIC2-206ENST00000548909 SPDYE6P0CI01 402 aa19.88■□□□□ 0.77
ERGIC2-206ENST00000548909 SPDYE2Q495Y8 402 aa19.88■□□□□ 0.77
ERGIC2-206ENST00000548909 FBLN2P98095 1184 aa19.79■□□□□ 0.76
ERGIC2-206ENST00000548909 EVX2Q03828 476 aa19.72■□□□□ 0.75
ERGIC2-206ENST00000548909 SPDYE1Q8NFV5 336 aaPredicted RBP19.65■□□□□ 0.74
ERGIC2-206ENST00000548909 PRKAR2AP13861 404 aaKnown RBP19.6■□□□□ 0.73
ERGIC2-206ENST00000548909 SSUH2Q9Y2M2 353 aa19.56■□□□□ 0.72
ERGIC2-206ENST00000548909 MKRN4PQ13434 485 aaPredicted RBP19.55■□□□□ 0.72
ERGIC2-206ENST00000548909 CLEC11AQ9Y240 323 aa19.53■□□□□ 0.72
ERGIC2-206ENST00000548909 C19orf67A6NJJ6 358 aa19.5■□□□□ 0.71
ERGIC2-206ENST00000548909 ZNF692Q9BU19 519 aaPredicted RBP19.49■□□□□ 0.71
ERGIC2-206ENST00000548909 GABBR2O75899 941 aa19.3■□□□□ 0.68
ERGIC2-206ENST00000548909 PRR29P0C7W0 189 aa19.2■□□□□ 0.66
ERGIC2-206ENST00000548909 CHADLQ6NUI6 762 aa19.2■□□□□ 0.66
ERGIC2-206ENST00000548909 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
ERGIC2-206ENST00000548909 LHX8Q68G74 356 aa19.13■□□□□ 0.65
ERGIC2-206ENST00000548909 CLCN6P51797 869 aa19■□□□□ 0.63
ERGIC2-206ENST00000548909 FARP1Q9Y4F1 1045 aaPredicted RBP18.96■□□□□ 0.63
ERGIC2-206ENST00000548909 CD44P16070 742 aaKnown RBP18.95■□□□□ 0.62
ERGIC2-206ENST00000548909 POTEIP0CG38 1075 aa18.88■□□□□ 0.61
ERGIC2-206ENST00000548909 ZNF579Q8NAF0 562 aaKnown RBP18.7■□□□□ 0.58
ERGIC2-206ENST00000548909 DCBLD2Q96PD2 775 aa18.66■□□□□ 0.58
ERGIC2-206ENST00000548909 STAG3Q9UJ98 1225 aa18.64■□□□□ 0.57
ERGIC2-206ENST00000548909 CREBZFQ9NS37 354 aa18.61■□□□□ 0.57
ERGIC2-206ENST00000548909 ZRANB1Q9UGI0 708 aa18.59■□□□□ 0.57
ERGIC2-206ENST00000548909 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
ERGIC2-206ENST00000548909 GALR2O43603 387 aaPredicted RBP18.43■□□□□ 0.54
ERGIC2-206ENST00000548909 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
ERGIC2-206ENST00000548909 SPDYE4A6NLX3 237 aa18.36■□□□□ 0.53
ERGIC2-206ENST00000548909 EHMT2Q96KQ7 1210 aa18.35■□□□□ 0.53
ERGIC2-206ENST00000548909 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
ERGIC2-206ENST00000548909 OTUD5Q96G74 571 aa18.29■□□□□ 0.52
ERGIC2-206ENST00000548909 MNX1P50219 401 aaPredicted RBP18.25■□□□□ 0.51
ERGIC2-206ENST00000548909 PHF12Q96QT6 1004 aa18.25■□□□□ 0.51
ERGIC2-206ENST00000548909 POTEB2H3BUK9 544 aa18.23■□□□□ 0.51
ERGIC2-206ENST00000548909 PLSCR2Q9NRY7 297 aa18.22■□□□□ 0.51
ERGIC2-206ENST00000548909 PELP1Q8IZL8 1130 aaKnown RBP18.12■□□□□ 0.49
ERGIC2-206ENST00000548909 ASTLQ6HA08 431 aaPredicted RBP18.09■□□□□ 0.49
ERGIC2-206ENST00000548909 C7P10643 843 aa18.02■□□□□ 0.48
ERGIC2-206ENST00000548909 SLC39A7Q92504 469 aa18.02■□□□□ 0.48
ERGIC2-206ENST00000548909 MS4A3Q96HJ5 214 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms