RNA–Protein interactions for RNA: ENST00000548873.1

AC009729.1-201, humanhuman

BASIC

Gene AC009729.1, Length 1,133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009729.1-201ENST00000548873 CHIC1Q5VXU3 224 aa18.16■□□□□ 0.5
AC009729.1-201ENST00000548873 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
AC009729.1-201ENST00000548873 NISCHQ9Y2I1 1504 aa16.48■□□□□ 0.23
AC009729.1-201ENST00000548873 PHF23Q9BUL5 403 aaPredicted RBP16.14■□□□□ 0.17
AC009729.1-201ENST00000548873 ABCC9O60706 1549 aa15.36■□□□□ 0.05
AC009729.1-201ENST00000548873 PLPPR3Q6T4P5 718 aa15.02■□□□□ -0
AC009729.1-201ENST00000548873 CCDC180Q9P1Z9 1646 aa14.85□□□□□ -0.03
AC009729.1-201ENST00000548873 SENP3Q9H4L4 574 aaPredicted RBP14.84□□□□□ -0.03
AC009729.1-201ENST00000548873 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
AC009729.1-201ENST00000548873 RB1CC1Q8TDY2 1594 aa14.34□□□□□ -0.11
AC009729.1-201ENST00000548873 PABPN1Q86U42 306 aaKnown RBP eCLIP14.32□□□□□ -0.12
AC009729.1-201ENST00000548873 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
AC009729.1-201ENST00000548873 NACADO15069 1562 aa14.15□□□□□ -0.14
AC009729.1-201ENST00000548873 ADRA2BP18089 450 aa14.15□□□□□ -0.14
AC009729.1-201ENST00000548873 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
AC009729.1-201ENST00000548873 KCNA4P22459 653 aa14.04□□□□□ -0.16
AC009729.1-201ENST00000548873 BICRAQ9NZM4 1560 aa14.03□□□□□ -0.16
AC009729.1-201ENST00000548873 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.17
AC009729.1-201ENST00000548873 EHMT2Q96KQ7 1210 aa13.95□□□□□ -0.18
AC009729.1-201ENST00000548873 CECR2Q9BXF3 1484 aa13.83□□□□□ -0.2
AC009729.1-201ENST00000548873 CC2D2AQ9P2K1 1620 aa13.81□□□□□ -0.2
AC009729.1-201ENST00000548873 MYO15BQ96JP2 1530 aa13.79□□□□□ -0.2
AC009729.1-201ENST00000548873 DNAJC5Q9H3Z4 198 aa13.77□□□□□ -0.21
AC009729.1-201ENST00000548873 FOXD1Q16676 465 aa13.76□□□□□ -0.21
AC009729.1-201ENST00000548873 EIF4G1Q04637 1599 aaKnown RBP13.67□□□□□ -0.22
AC009729.1-201ENST00000548873 SCRIBQ14160 1630 aa13.63□□□□□ -0.23
AC009729.1-201ENST00000548873 SHROOM4Q9ULL8 1493 aa13.61□□□□□ -0.23
AC009729.1-201ENST00000548873 CSRNP3Q8WYN3 585 aa13.6□□□□□ -0.23
AC009729.1-201ENST00000548873 ZCCHC6Q5VYS8 1495 aaKnown RBP13.56□□□□□ -0.24
AC009729.1-201ENST00000548873 DCAF1Q9Y4B6 1507 aa13.5□□□□□ -0.25
AC009729.1-201ENST00000548873 SLC4A1APQ9BWU0 796 aaKnown RBP13.44□□□□□ -0.26
AC009729.1-201ENST00000548873 PPP4R3CPQ6ZMV5 832 aa13.38□□□□□ -0.27
AC009729.1-201ENST00000548873 CUX2O14529 1486 aa13.26□□□□□ -0.29
AC009729.1-201ENST00000548873 ERCC6Q03468 1493 aa13.22□□□□□ -0.29
AC009729.1-201ENST00000548873 NCBP3Q53F19 620 aaKnown RBP13.15□□□□□ -0.3
AC009729.1-201ENST00000548873 NESP48681 1621 aa13.12□□□□□ -0.31
AC009729.1-201ENST00000548873 NPM3O75607 178 aaKnown RBP13.11□□□□□ -0.31
AC009729.1-201ENST00000548873 NCAPD3P42695 1498 aa13.1□□□□□ -0.31
AC009729.1-201ENST00000548873 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
AC009729.1-201ENST00000548873 ATAD2BQ9ULI0 1458 aa13.05□□□□□ -0.32
AC009729.1-201ENST00000548873 PIAS4Q8N2W9 510 aaPredicted RBP13.05□□□□□ -0.32
AC009729.1-201ENST00000548873 ZBTB22O15209 634 aa13.03□□□□□ -0.32
AC009729.1-201ENST00000548873 THOC2Q8NI27 1593 aaKnown RBP12.96□□□□□ -0.33
AC009729.1-201ENST00000548873 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
AC009729.1-201ENST00000548873 SMARCA4P51532 1647 aa12.92□□□□□ -0.34
AC009729.1-201ENST00000548873 SMARCA2P51531 1590 aa12.92□□□□□ -0.34
AC009729.1-201ENST00000548873 KIF21AQ7Z4S6 1674 aa12.88□□□□□ -0.35
AC009729.1-201ENST00000548873 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
AC009729.1-201ENST00000548873 LAMC3Q9Y6N6 1575 aa12.83□□□□□ -0.36
AC009729.1-201ENST00000548873 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
AC009729.1-201ENST00000548873 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
AC009729.1-201ENST00000548873 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.37
AC009729.1-201ENST00000548873 MROH2BQ7Z745 1585 aa12.75□□□□□ -0.37
AC009729.1-201ENST00000548873 PEG3Q9GZU2 1588 aa12.75□□□□□ -0.37
AC009729.1-201ENST00000548873 MRC2Q9UBG0 1479 aa12.72□□□□□ -0.37
AC009729.1-201ENST00000548873 CADPSQ9ULU8 1353 aa12.71□□□□□ -0.37
AC009729.1-201ENST00000548873 WDR62O43379 1518 aa12.68□□□□□ -0.38
AC009729.1-201ENST00000548873 OSCARQ8IYS5 282 aa12.68□□□□□ -0.38
AC009729.1-201ENST00000548873 FOXD4L1Q9NU39 408 aa12.63□□□□□ -0.39
AC009729.1-201ENST00000548873 SLC24A1O60721 1099 aa12.62□□□□□ -0.39
AC009729.1-201ENST00000548873 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
AC009729.1-201ENST00000548873 WIZO95785 1651 aa12.58□□□□□ -0.4
AC009729.1-201ENST00000548873 FANCD2Q9BXW9 1451 aa12.58□□□□□ -0.4
AC009729.1-201ENST00000548873 SCAF1Q9H7N4 1312 aaKnown RBP12.57□□□□□ -0.4
AC009729.1-201ENST00000548873 RTN4Q9NQC3 1192 aaKnown RBP12.56□□□□□ -0.4
AC009729.1-201ENST00000548873 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
AC009729.1-201ENST00000548873 RIMBP3BA6NNM3 1639 aa12.55□□□□□ -0.4
AC009729.1-201ENST00000548873 RIMBP3Q9UFD9 1639 aa12.55□□□□□ -0.4
AC009729.1-201ENST00000548873 URB2Q14146 1524 aaKnown RBP12.52□□□□□ -0.4
AC009729.1-201ENST00000548873 CFTRP13569 1480 aa12.48□□□□□ -0.41
AC009729.1-201ENST00000548873 CYB5RLQ6IPT4 315 aa12.48□□□□□ -0.41
AC009729.1-201ENST00000548873 AMER1Q5JTC6 1135 aaPredicted RBP12.47□□□□□ -0.41
AC009729.1-201ENST00000548873 ARHGEF11O15085 1522 aa12.46□□□□□ -0.42
AC009729.1-201ENST00000548873 ZNF608Q9ULD9 1512 aaPredicted RBP12.46□□□□□ -0.42
AC009729.1-201ENST00000548873 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
AC009729.1-201ENST00000548873 MAPK8IP2Q13387 824 aaPredicted RBP12.4□□□□□ -0.42
AC009729.1-201ENST00000548873 RNF216Q9NWF9 866 aaPredicted RBP12.37□□□□□ -0.43
AC009729.1-201ENST00000548873 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
AC009729.1-201ENST00000548873 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
AC009729.1-201ENST00000548873 ARAP1Q96P48 1450 aa12.34□□□□□ -0.43
AC009729.1-201ENST00000548873 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
AC009729.1-201ENST00000548873 FBLN2P98095 1184 aa12.31□□□□□ -0.44
AC009729.1-201ENST00000548873 AQRO60306 1485 aaKnown RBP eCLIP12.3□□□□□ -0.44
AC009729.1-201ENST00000548873 CHD1O14646 1710 aa12.3□□□□□ -0.44
AC009729.1-201ENST00000548873 TOPBP1Q92547 1522 aa12.3□□□□□ -0.44
AC009729.1-201ENST00000548873 EIF4G3O43432 1585 aaKnown RBP12.29□□□□□ -0.44
AC009729.1-201ENST00000548873 PRDM2Q13029 1718 aa12.27□□□□□ -0.45
AC009729.1-201ENST00000548873 CCDC88BA6NC98 1476 aa12.26□□□□□ -0.45
AC009729.1-201ENST00000548873 MSH5O43196 834 aa12.25□□□□□ -0.45
AC009729.1-201ENST00000548873 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
AC009729.1-201ENST00000548873 TARBP1Q13395 1621 aaKnown RBP12.21□□□□□ -0.46
AC009729.1-201ENST00000548873 DNMBPQ6XZF7 1577 aa12.18□□□□□ -0.46
AC009729.1-201ENST00000548873 RAD54L2Q9Y4B4 1467 aa12.18□□□□□ -0.46
AC009729.1-201ENST00000548873 TDRD9Q8NDG6 1382 aaKnown RBP12.18□□□□□ -0.46
AC009729.1-201ENST00000548873 HOXD11P31277 338 aaPredicted RBP12.17□□□□□ -0.46
AC009729.1-201ENST00000548873 ATXN8OSP0DMR3 200 aa12.16□□□□□ -0.46
AC009729.1-201ENST00000548873 ABCC8Q09428 1581 aa12.16□□□□□ -0.46
AC009729.1-201ENST00000548873 POLA1P09884 1462 aaPredicted RBP12.15□□□□□ -0.46
AC009729.1-201ENST00000548873 CLASP1Q7Z460 1538 aa12.12□□□□□ -0.47
AC009729.1-201ENST00000548873 SNAPC4Q5SXM2 1469 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms