RNA–Protein interactions for RNA: ENST00000548668.1

BPNT1-211, Transcript of 3'(2'), 5'-bisphosphate nucleotidase 1, humanhuman

TSL 3

Gene BPNT1, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPNT1-211ENST00000548668 AEBP2Q6ZN18 517 aaPredicted RBP29.87■■■□□ 2.37
BPNT1-211ENST00000548668 CHIC1Q5VXU3 224 aa28.54■■■□□ 2.16
BPNT1-211ENST00000548668 SENP3Q9H4L4 574 aaPredicted RBP25.3■■□□□ 1.64
BPNT1-211ENST00000548668 PHF23Q9BUL5 403 aaPredicted RBP25.12■■□□□ 1.61
BPNT1-211ENST00000548668 FOXD1Q16676 465 aa23.64■■□□□ 1.37
BPNT1-211ENST00000548668 PLPPR3Q6T4P5 718 aa22.88■■□□□ 1.25
BPNT1-211ENST00000548668 PPP6R1Q9UPN7 881 aa22.37■■□□□ 1.17
BPNT1-211ENST00000548668 ADRA2BP18089 450 aa22.29■■□□□ 1.16
BPNT1-211ENST00000548668 PIAS4Q8N2W9 510 aaPredicted RBP22.1■■□□□ 1.13
BPNT1-211ENST00000548668 MSH5O43196 834 aa21.91■■□□□ 1.1
BPNT1-211ENST00000548668 POTEDQ86YR6 584 aa21.02■□□□□ 0.96
BPNT1-211ENST00000548668 MAPK8IP2Q13387 824 aaPredicted RBP20.42■□□□□ 0.86
BPNT1-211ENST00000548668 SCAF1Q9H7N4 1312 aaKnown RBP20.25■□□□□ 0.83
BPNT1-211ENST00000548668 PPP4R3CPQ6ZMV5 832 aa20.14■□□□□ 0.81
BPNT1-211ENST00000548668 DMRT2Q9Y5R5 561 aa20.14■□□□□ 0.81
BPNT1-211ENST00000548668 CNKSR2Q8WXI2 1034 aa19.66■□□□□ 0.74
BPNT1-211ENST00000548668 HOXD11P31277 338 aaPredicted RBP19.51■□□□□ 0.71
BPNT1-211ENST00000548668 RNF216Q9NWF9 866 aaPredicted RBP19.42■□□□□ 0.7
BPNT1-211ENST00000548668 NCBP3Q53F19 620 aaKnown RBP19.36■□□□□ 0.69
BPNT1-211ENST00000548668 DCAF8L1A6NGE4 600 aa19.29■□□□□ 0.68
BPNT1-211ENST00000548668 NPM3O75607 178 aaKnown RBP19.18■□□□□ 0.66
BPNT1-211ENST00000548668 KCNA4P22459 653 aa19.08■□□□□ 0.64
BPNT1-211ENST00000548668 RNF39Q9H2S5 420 aa18.78■□□□□ 0.6
BPNT1-211ENST00000548668 DNAJC5BQ9UF47 199 aa18.72■□□□□ 0.59
BPNT1-211ENST00000548668 CACNB1Q02641 598 aaPredicted RBP18.67■□□□□ 0.58
BPNT1-211ENST00000548668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.56■□□□□ 0.56
BPNT1-211ENST00000548668 C1QBPQ07021 282 aaKnown RBP18.47■□□□□ 0.55
BPNT1-211ENST00000548668 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
BPNT1-211ENST00000548668 U3KPZ7 1027 aaPredicted RBP18.26■□□□□ 0.51
BPNT1-211ENST00000548668 SLC4A1APQ9BWU0 796 aaKnown RBP18.01■□□□□ 0.47
BPNT1-211ENST00000548668 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
BPNT1-211ENST00000548668 CAPN15O75808 1086 aa17.82■□□□□ 0.44
BPNT1-211ENST00000548668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
BPNT1-211ENST00000548668 DSG3P32926 999 aa17.7■□□□□ 0.42
BPNT1-211ENST00000548668 HNRNPUL2Q1KMD3 747 aaKnown RBP17.7■□□□□ 0.42
BPNT1-211ENST00000548668 MYCNP04198 464 aaPredicted RBP17.67■□□□□ 0.42
BPNT1-211ENST00000548668 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
BPNT1-211ENST00000548668 FOXD4L1Q9NU39 408 aa17.65■□□□□ 0.42
BPNT1-211ENST00000548668 TRHP20396 242 aaPredicted RBP17.63■□□□□ 0.41
BPNT1-211ENST00000548668 APLP2Q06481 763 aa17.61■□□□□ 0.41
BPNT1-211ENST00000548668 ZBTB22O15209 634 aa17.58■□□□□ 0.4
BPNT1-211ENST00000548668 ZNF219Q9P2Y4 722 aaPredicted RBP17.53■□□□□ 0.4
BPNT1-211ENST00000548668 ABCB7O75027 752 aa17.48■□□□□ 0.39
BPNT1-211ENST00000548668 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
BPNT1-211ENST00000548668 POLA2Q14181 598 aa17.23■□□□□ 0.35
BPNT1-211ENST00000548668 ATXN8OSP0DMR3 200 aa17.05■□□□□ 0.32
BPNT1-211ENST00000548668 CSRNP3Q8WYN3 585 aa17■□□□□ 0.31
BPNT1-211ENST00000548668 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
BPNT1-211ENST00000548668 ZBTB12Q9Y330 459 aaPredicted RBP16.78■□□□□ 0.28
BPNT1-211ENST00000548668 RBM42Q9BTD8 480 aaKnown RBP16.77■□□□□ 0.28
BPNT1-211ENST00000548668 OSCARQ8IYS5 282 aa16.66■□□□□ 0.26
BPNT1-211ENST00000548668 MKRN4PQ13434 485 aaPredicted RBP16.56■□□□□ 0.24
BPNT1-211ENST00000548668 FBLN2P98095 1184 aa16.52■□□□□ 0.24
BPNT1-211ENST00000548668 POTEHQ6S545 545 aa16.5■□□□□ 0.23
BPNT1-211ENST00000548668 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
BPNT1-211ENST00000548668 REM2Q8IYK8 340 aaPredicted RBP16.38■□□□□ 0.21
BPNT1-211ENST00000548668 CHRDL2Q6WN34 429 aa16.36■□□□□ 0.21
BPNT1-211ENST00000548668 SPDYE2BA6NHP3 402 aa16.34■□□□□ 0.21
BPNT1-211ENST00000548668 SPDYE6P0CI01 402 aa16.34■□□□□ 0.21
BPNT1-211ENST00000548668 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
BPNT1-211ENST00000548668 ZNF692Q9BU19 519 aaPredicted RBP16.22■□□□□ 0.19
BPNT1-211ENST00000548668 PITPNM1O00562 1244 aa16.2■□□□□ 0.18
BPNT1-211ENST00000548668 SSUH2Q9Y2M2 353 aa16.19■□□□□ 0.18
BPNT1-211ENST00000548668 PIP4P2Q8N4L2 257 aa16.07■□□□□ 0.16
BPNT1-211ENST00000548668 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
BPNT1-211ENST00000548668 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
BPNT1-211ENST00000548668 SPDYE1Q8NFV5 336 aaPredicted RBP15.99■□□□□ 0.15
BPNT1-211ENST00000548668 CLEC11AQ9Y240 323 aa15.98■□□□□ 0.15
BPNT1-211ENST00000548668 SPDYE4A6NLX3 237 aa15.85■□□□□ 0.13
BPNT1-211ENST00000548668 PRKAR2AP13861 404 aaKnown RBP15.78■□□□□ 0.12
BPNT1-211ENST00000548668 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
BPNT1-211ENST00000548668 CHADLQ6NUI6 762 aa15.7■□□□□ 0.1
BPNT1-211ENST00000548668 HAX1O00165 279 aa15.68■□□□□ 0.1
BPNT1-211ENST00000548668 EVX2Q03828 476 aa15.61■□□□□ 0.09
BPNT1-211ENST00000548668 SP7Q8TDD2 431 aaPredicted RBP15.58■□□□□ 0.08
BPNT1-211ENST00000548668 STAG3Q9UJ98 1225 aa15.54■□□□□ 0.08
BPNT1-211ENST00000548668 PROM2Q8N271 834 aa15.53■□□□□ 0.08
BPNT1-211ENST00000548668 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
BPNT1-211ENST00000548668 CREBZFQ9NS37 354 aa15.47■□□□□ 0.07
BPNT1-211ENST00000548668 FARP1Q9Y4F1 1045 aaPredicted RBP15.45■□□□□ 0.06
BPNT1-211ENST00000548668 FKBP8Q14318 412 aa15.36■□□□□ 0.05
BPNT1-211ENST00000548668 CD44P16070 742 aaKnown RBP15.28■□□□□ 0.04
BPNT1-211ENST00000548668 MNX1P50219 401 aaPredicted RBP15.26■□□□□ 0.03
BPNT1-211ENST00000548668 GABBR2O75899 941 aa15.2■□□□□ 0.02
BPNT1-211ENST00000548668 ZRANB1Q9UGI0 708 aa15.12■□□□□ 0.01
BPNT1-211ENST00000548668 NPM1P06748 294 aaKnown RBP eCLIP15.1■□□□□ 0.01
BPNT1-211ENST00000548668 MIER1Q8N108 512 aa15.08■□□□□ 0
BPNT1-211ENST00000548668 ZNF579Q8NAF0 562 aaKnown RBP15.05■□□□□ -0
BPNT1-211ENST00000548668 PLCD3Q8N3E9 789 aa14.97□□□□□ -0.01
BPNT1-211ENST00000548668 PAK3O75914 559 aaPredicted RBP14.96□□□□□ -0.01
BPNT1-211ENST00000548668 PHF12Q96QT6 1004 aa14.96□□□□□ -0.01
BPNT1-211ENST00000548668 PLEKHG5O94827 1062 aa14.94□□□□□ -0.02
BPNT1-211ENST00000548668 POTEIP0CG38 1075 aa14.94□□□□□ -0.02
BPNT1-211ENST00000548668 CLCN6P51797 869 aa14.93□□□□□ -0.02
BPNT1-211ENST00000548668 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
BPNT1-211ENST00000548668 GALR2O43603 387 aaPredicted RBP14.9□□□□□ -0.02
BPNT1-211ENST00000548668 RASEFQ8IZ41 740 aa14.87□□□□□ -0.03
BPNT1-211ENST00000548668 FBXO3Q9UK99 471 aa14.87□□□□□ -0.03
BPNT1-211ENST00000548668 CCDC61Q9Y6R9 512 aa14.83□□□□□ -0.04
BPNT1-211ENST00000548668 NUBP1P53384 320 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 879.5 ms