RNA–Protein interactions for RNA: ENST00000548098.1

ERGIC2-204, Transcript of ERGIC and golgi 2, humanhuman

TSL 2

Gene ERGIC2, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC2-204ENST00000548098 AEBP2Q6ZN18 517 aaPredicted RBP36.08■■■■□ 3.37
ERGIC2-204ENST00000548098 CHIC1Q5VXU3 224 aa33.87■■■■□ 3.01
ERGIC2-204ENST00000548098 SENP3Q9H4L4 574 aaPredicted RBP30.96■■■□□ 2.55
ERGIC2-204ENST00000548098 PHF23Q9BUL5 403 aaPredicted RBP30.43■■■□□ 2.46
ERGIC2-204ENST00000548098 FOXD1Q16676 465 aa28.83■■■□□ 2.21
ERGIC2-204ENST00000548098 POTEDQ86YR6 584 aa27.34■■□□□ 1.97
ERGIC2-204ENST00000548098 MSH5O43196 834 aa27.27■■□□□ 1.96
ERGIC2-204ENST00000548098 PLPPR3Q6T4P5 718 aa26.88■■□□□ 1.89
ERGIC2-204ENST00000548098 PIAS4Q8N2W9 510 aaPredicted RBP26.88■■□□□ 1.89
ERGIC2-204ENST00000548098 PPP6R1Q9UPN7 881 aa26.55■■□□□ 1.84
ERGIC2-204ENST00000548098 ADRA2BP18089 450 aa26.46■■□□□ 1.83
ERGIC2-204ENST00000548098 DMRT2Q9Y5R5 561 aa24.45■■□□□ 1.5
ERGIC2-204ENST00000548098 MAPK8IP2Q13387 824 aaPredicted RBP24.43■■□□□ 1.5
ERGIC2-204ENST00000548098 SCAF1Q9H7N4 1312 aaKnown RBP24.34■■□□□ 1.49
ERGIC2-204ENST00000548098 CACNB1Q02641 598 aaPredicted RBP23.65■■□□□ 1.38
ERGIC2-204ENST00000548098 DCAF8L1A6NGE4 600 aa23.47■■□□□ 1.35
ERGIC2-204ENST00000548098 PPP4R3CPQ6ZMV5 832 aa23.46■■□□□ 1.35
ERGIC2-204ENST00000548098 HOXD11P31277 338 aaPredicted RBP23.37■■□□□ 1.33
ERGIC2-204ENST00000548098 CNKSR2Q8WXI2 1034 aa23.17■■□□□ 1.3
ERGIC2-204ENST00000548098 RNF39Q9H2S5 420 aa23.17■■□□□ 1.3
ERGIC2-204ENST00000548098 RNF216Q9NWF9 866 aaPredicted RBP23.08■■□□□ 1.29
ERGIC2-204ENST00000548098 C1QBPQ07021 282 aaKnown RBP22.85■■□□□ 1.25
ERGIC2-204ENST00000548098 DNAJC5BQ9UF47 199 aa22.71■■□□□ 1.23
ERGIC2-204ENST00000548098 NCBP3Q53F19 620 aaKnown RBP22.49■■□□□ 1.19
ERGIC2-204ENST00000548098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.28■■□□□ 1.16
ERGIC2-204ENST00000548098 NPM3O75607 178 aaKnown RBP22.08■■□□□ 1.13
ERGIC2-204ENST00000548098 U3KPZ7 1027 aaPredicted RBP21.72■■□□□ 1.07
ERGIC2-204ENST00000548098 CAPN15O75808 1086 aa21.57■■□□□ 1.04
ERGIC2-204ENST00000548098 DSG3P32926 999 aa21.52■■□□□ 1.04
ERGIC2-204ENST00000548098 SPINK5Q9NQ38 1064 aaPredicted RBP21.52■■□□□ 1.04
ERGIC2-204ENST00000548098 POTEHQ6S545 545 aa21.36■■□□□ 1.01
ERGIC2-204ENST00000548098 KCNA4P22459 653 aa21.21■□□□□ 0.99
ERGIC2-204ENST00000548098 SLC4A2P04920 1241 aa21.19■□□□□ 0.98
ERGIC2-204ENST00000548098 APLP2Q06481 763 aa21.19■□□□□ 0.98
ERGIC2-204ENST00000548098 TRHP20396 242 aaPredicted RBP21.09■□□□□ 0.97
ERGIC2-204ENST00000548098 ZNF219Q9P2Y4 722 aaPredicted RBP21.09■□□□□ 0.97
ERGIC2-204ENST00000548098 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.04■□□□□ 0.96
ERGIC2-204ENST00000548098 HNRNPUL2Q1KMD3 747 aaKnown RBP21.04■□□□□ 0.96
ERGIC2-204ENST00000548098 ABCB7O75027 752 aa20.99■□□□□ 0.95
ERGIC2-204ENST00000548098 SAMD1Q6SPF0 538 aaPredicted RBP20.87■□□□□ 0.93
ERGIC2-204ENST00000548098 RBM42Q9BTD8 480 aaKnown RBP20.64■□□□□ 0.89
ERGIC2-204ENST00000548098 MYCNP04198 464 aaPredicted RBP20.49■□□□□ 0.87
ERGIC2-204ENST00000548098 POLA2Q14181 598 aa20.41■□□□□ 0.86
ERGIC2-204ENST00000548098 CHRDL2Q6WN34 429 aa20.32■□□□□ 0.84
ERGIC2-204ENST00000548098 ZBTB12Q9Y330 459 aaPredicted RBP20.05■□□□□ 0.8
ERGIC2-204ENST00000548098 AKT1S1Q96B36 256 aa20.03■□□□□ 0.8
ERGIC2-204ENST00000548098 FOXD4L1Q9NU39 408 aa20.01■□□□□ 0.79
ERGIC2-204ENST00000548098 SLC4A1APQ9BWU0 796 aaKnown RBP19.97■□□□□ 0.79
ERGIC2-204ENST00000548098 ATF5Q9Y2D1 282 aaPredicted RBP19.95■□□□□ 0.78
ERGIC2-204ENST00000548098 SP7Q8TDD2 431 aaPredicted RBP19.81■□□□□ 0.76
ERGIC2-204ENST00000548098 REM2Q8IYK8 340 aaPredicted RBP19.8■□□□□ 0.76
ERGIC2-204ENST00000548098 OSCARQ8IYS5 282 aa19.78■□□□□ 0.76
ERGIC2-204ENST00000548098 PIP4P2Q8N4L2 257 aa19.71■□□□□ 0.75
ERGIC2-204ENST00000548098 PITPNM1O00562 1244 aa19.59■□□□□ 0.73
ERGIC2-204ENST00000548098 FXR2P51116 673 aaKnown RBP eCLIP19.53■□□□□ 0.72
ERGIC2-204ENST00000548098 HAX1O00165 279 aa19.5■□□□□ 0.71
ERGIC2-204ENST00000548098 ZBTB22O15209 634 aa19.46■□□□□ 0.71
ERGIC2-204ENST00000548098 ATXN8OSP0DMR3 200 aa19.46■□□□□ 0.71
ERGIC2-204ENST00000548098 SPDYE2BA6NHP3 402 aa19.35■□□□□ 0.69
ERGIC2-204ENST00000548098 SPDYE6P0CI01 402 aa19.35■□□□□ 0.69
ERGIC2-204ENST00000548098 SPDYE2Q495Y8 402 aa19.35■□□□□ 0.69
ERGIC2-204ENST00000548098 FBLN2P98095 1184 aa19.33■□□□□ 0.68
ERGIC2-204ENST00000548098 SPDYE1Q8NFV5 336 aaPredicted RBP19.14■□□□□ 0.65
ERGIC2-204ENST00000548098 EVX2Q03828 476 aa19.13■□□□□ 0.65
ERGIC2-204ENST00000548098 PRKAR2AP13861 404 aaKnown RBP19.09■□□□□ 0.65
ERGIC2-204ENST00000548098 CLEC11AQ9Y240 323 aa19.09■□□□□ 0.65
ERGIC2-204ENST00000548098 MKRN4PQ13434 485 aaPredicted RBP19.02■□□□□ 0.64
ERGIC2-204ENST00000548098 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
ERGIC2-204ENST00000548098 SSUH2Q9Y2M2 353 aa19.01■□□□□ 0.63
ERGIC2-204ENST00000548098 C19orf67A6NJJ6 358 aa18.93■□□□□ 0.62
ERGIC2-204ENST00000548098 GABBR2O75899 941 aa18.74■□□□□ 0.59
ERGIC2-204ENST00000548098 PRR29P0C7W0 189 aa18.73■□□□□ 0.59
ERGIC2-204ENST00000548098 CHADLQ6NUI6 762 aa18.73■□□□□ 0.59
ERGIC2-204ENST00000548098 PABPN1Q86U42 306 aaKnown RBP eCLIP18.71■□□□□ 0.59
ERGIC2-204ENST00000548098 LHX8Q68G74 356 aa18.56■□□□□ 0.56
ERGIC2-204ENST00000548098 CD44P16070 742 aaKnown RBP18.47■□□□□ 0.55
ERGIC2-204ENST00000548098 FARP1Q9Y4F1 1045 aaPredicted RBP18.45■□□□□ 0.54
ERGIC2-204ENST00000548098 CLCN6P51797 869 aa18.4■□□□□ 0.54
ERGIC2-204ENST00000548098 POTEIP0CG38 1075 aa18.3■□□□□ 0.52
ERGIC2-204ENST00000548098 DCBLD2Q96PD2 775 aa18.19■□□□□ 0.5
ERGIC2-204ENST00000548098 ZNF579Q8NAF0 562 aaKnown RBP18.17■□□□□ 0.5
ERGIC2-204ENST00000548098 STAG3Q9UJ98 1225 aa18.16■□□□□ 0.5
ERGIC2-204ENST00000548098 CSRNP3Q8WYN3 585 aa18.15■□□□□ 0.5
ERGIC2-204ENST00000548098 ZRANB1Q9UGI0 708 aa18.13■□□□□ 0.49
ERGIC2-204ENST00000548098 CREBZFQ9NS37 354 aa18.11■□□□□ 0.49
ERGIC2-204ENST00000548098 PAK3O75914 559 aaPredicted RBP17.95■□□□□ 0.46
ERGIC2-204ENST00000548098 SPDYE4A6NLX3 237 aa17.94■□□□□ 0.46
ERGIC2-204ENST00000548098 GALR2O43603 387 aaPredicted RBP17.94■□□□□ 0.46
ERGIC2-204ENST00000548098 NPM1P06748 294 aaKnown RBP eCLIP17.84■□□□□ 0.45
ERGIC2-204ENST00000548098 PHF12Q96QT6 1004 aa17.81■□□□□ 0.44
ERGIC2-204ENST00000548098 PLSCR2Q9NRY7 297 aa17.75■□□□□ 0.43
ERGIC2-204ENST00000548098 OTUD5Q96G74 571 aa17.74■□□□□ 0.43
ERGIC2-204ENST00000548098 MNX1P50219 401 aaPredicted RBP17.72■□□□□ 0.43
ERGIC2-204ENST00000548098 POTEB2H3BUK9 544 aa17.68■□□□□ 0.42
ERGIC2-204ENST00000548098 EHMT2Q96KQ7 1210 aa17.68■□□□□ 0.42
ERGIC2-204ENST00000548098 PELP1Q8IZL8 1130 aaKnown RBP17.6■□□□□ 0.41
ERGIC2-204ENST00000548098 ASTLQ6HA08 431 aaPredicted RBP17.57■□□□□ 0.4
ERGIC2-204ENST00000548098 MS4A3Q96HJ5 214 aa17.56■□□□□ 0.4
ERGIC2-204ENST00000548098 METRNQ9UJH8 293 aa17.54■□□□□ 0.4
ERGIC2-204ENST00000548098 SLC39A7Q92504 469 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms