RNA–Protein interactions for RNA: ENST00000547528.5

SART3-208, Transcript of squamous cell carcinoma antigen recognized by T cells 3, humanhuman

TSL 1 (best)

Gene SART3, Length 1,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SART3-208ENST00000547528 NISCHQ9Y2I1 1504 aa29.86■■■□□ 2.37
SART3-208ENST00000547528 CCDC180Q9P1Z9 1646 aa26.12■■□□□ 1.77
SART3-208ENST00000547528 ABCC9O60706 1549 aa25.06■■□□□ 1.6
SART3-208ENST00000547528 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
SART3-208ENST00000547528 DCAF8L2P0C7V8 631 aa24.85■■□□□ 1.57
SART3-208ENST00000547528 DCAF1Q9Y4B6 1507 aa24.6■■□□□ 1.53
SART3-208ENST00000547528 SHROOM4Q9ULL8 1493 aa24.52■■□□□ 1.52
SART3-208ENST00000547528 MYO15BQ96JP2 1530 aa24.39■■□□□ 1.49
SART3-208ENST00000547528 NACADO15069 1562 aa24.39■■□□□ 1.49
SART3-208ENST00000547528 RB1CC1Q8TDY2 1594 aa24.26■■□□□ 1.47
SART3-208ENST00000547528 SCRIBQ14160 1630 aa24.09■■□□□ 1.45
SART3-208ENST00000547528 SUPT5HO00267 1087 aaKnown RBP24.02■■□□□ 1.44
SART3-208ENST00000547528 UNC13AQ9UPW8 1703 aa23.87■■□□□ 1.41
SART3-208ENST00000547528 PABPN1Q86U42 306 aaKnown RBP eCLIP23.62■■□□□ 1.37
SART3-208ENST00000547528 BICRAQ9NZM4 1560 aa23.61■■□□□ 1.37
SART3-208ENST00000547528 CHIC1Q5VXU3 224 aa23.49■■□□□ 1.35
SART3-208ENST00000547528 CECR2Q9BXF3 1484 aa23.3■■□□□ 1.32
SART3-208ENST00000547528 MROH2BQ7Z745 1585 aa23.11■■□□□ 1.29
SART3-208ENST00000547528 RSF1Q96T23 1441 aaPredicted RBP23.09■■□□□ 1.29
SART3-208ENST00000547528 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
SART3-208ENST00000547528 SMARCA4P51532 1647 aa23.03■■□□□ 1.28
SART3-208ENST00000547528 WIZO95785 1651 aa22.93■■□□□ 1.26
SART3-208ENST00000547528 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.26
SART3-208ENST00000547528 ATAD2BQ9ULI0 1458 aa22.71■■□□□ 1.23
SART3-208ENST00000547528 PEG3Q9GZU2 1588 aa22.7■■□□□ 1.22
SART3-208ENST00000547528 CC2D2AQ9P2K1 1620 aa22.65■■□□□ 1.22
SART3-208ENST00000547528 HRCP23327 699 aa22.65■■□□□ 1.22
SART3-208ENST00000547528 SMARCA2P51531 1590 aa22.64■■□□□ 1.21
SART3-208ENST00000547528 LOC105371045A0A1W2PR82 267 aa22.62■■□□□ 1.21
SART3-208ENST00000547528 TOP2AP11388 1531 aaKnown RBP22.6■■□□□ 1.21
SART3-208ENST00000547528 BAZ1BQ9UIG0 1483 aaKnown RBP22.55■■□□□ 1.2
SART3-208ENST00000547528 PCGF6Q9BYE7 350 aa22.53■■□□□ 1.2
SART3-208ENST00000547528 NCAPD3P42695 1498 aa22.52■■□□□ 1.2
SART3-208ENST00000547528 TRIM41Q8WV44 630 aa22.51■■□□□ 1.19
SART3-208ENST00000547528 HMGXB3Q12766 1538 aa22.45■■□□□ 1.19
SART3-208ENST00000547528 DNAJC5BQ9UF47 199 aa22.42■■□□□ 1.18
SART3-208ENST00000547528 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
SART3-208ENST00000547528 TRIM26Q12899 539 aaPredicted RBP22.31■■□□□ 1.16
SART3-208ENST00000547528 FAM9AQ8IZU1 332 aaPredicted RBP22.12■■□□□ 1.13
SART3-208ENST00000547528 CFTRP13569 1480 aa21.96■■□□□ 1.11
SART3-208ENST00000547528 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
SART3-208ENST00000547528 PPARGC1BQ86YN6 1023 aaKnown RBP21.95■■□□□ 1.1
SART3-208ENST00000547528 NESP48681 1621 aa21.95■■□□□ 1.1
SART3-208ENST00000547528 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
SART3-208ENST00000547528 ZEB1P37275 1124 aaPredicted RBP21.89■■□□□ 1.09
SART3-208ENST00000547528 EEA1Q15075 1411 aa21.86■■□□□ 1.09
SART3-208ENST00000547528 PRDM2Q13029 1718 aa21.84■■□□□ 1.09
SART3-208ENST00000547528 LAMC3Q9Y6N6 1575 aa21.8■■□□□ 1.08
SART3-208ENST00000547528 EHMT2Q96KQ7 1210 aa21.76■■□□□ 1.07
SART3-208ENST00000547528 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
SART3-208ENST00000547528 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
SART3-208ENST00000547528 SOGA1O94964 1423 aa21.72■■□□□ 1.07
SART3-208ENST00000547528 TNIKQ9UKE5 1360 aa21.7■■□□□ 1.07
SART3-208ENST00000547528 SYNJ1O43426 1573 aa21.69■■□□□ 1.06
SART3-208ENST00000547528 KIF21AQ7Z4S6 1674 aa21.66■■□□□ 1.06
SART3-208ENST00000547528 CEP162Q5TB80 1403 aa21.65■■□□□ 1.06
SART3-208ENST00000547528 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
SART3-208ENST00000547528 CSRNP3Q8WYN3 585 aa21.63■■□□□ 1.05
SART3-208ENST00000547528 CUX1P39880 1505 aa21.62■■□□□ 1.05
SART3-208ENST00000547528 GOLGA3Q08378 1498 aa21.6■■□□□ 1.05
SART3-208ENST00000547528 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
SART3-208ENST00000547528 CEP164Q9UPV0 1460 aa21.6■■□□□ 1.05
SART3-208ENST00000547528 TOP2BQ02880 1626 aa21.57■■□□□ 1.04
SART3-208ENST00000547528 KIF21BO75037 1637 aa21.56■■□□□ 1.04
SART3-208ENST00000547528 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
SART3-208ENST00000547528 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
SART3-208ENST00000547528 ERCC6Q03468 1493 aa21.46■■□□□ 1.03
SART3-208ENST00000547528 TOPBP1Q92547 1522 aa21.46■■□□□ 1.03
SART3-208ENST00000547528 DNMBPQ6XZF7 1577 aa21.46■■□□□ 1.03
SART3-208ENST00000547528 FGD5Q6ZNL6 1462 aa21.41■■□□□ 1.02
SART3-208ENST00000547528 UBTFP17480 764 aaKnown RBP21.41■■□□□ 1.02
SART3-208ENST00000547528 MRC2Q9UBG0 1479 aa21.4■■□□□ 1.02
SART3-208ENST00000547528 POLA1P09884 1462 aaPredicted RBP21.34■■□□□ 1.01
SART3-208ENST00000547528 THOC2Q8NI27 1593 aaKnown RBP21.33■■□□□ 1.01
SART3-208ENST00000547528 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
SART3-208ENST00000547528 WDR62O43379 1518 aa21.3■■□□□ 1
SART3-208ENST00000547528 CLIP1P30622 1438 aa21.28■■□□□ 1
SART3-208ENST00000547528 CCER1Q8TC90 406 aaPredicted RBP21.26■□□□□ 0.99
SART3-208ENST00000547528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.25■□□□□ 0.99
SART3-208ENST00000547528 RAPGEF2Q9Y4G8 1499 aa21.25■□□□□ 0.99
SART3-208ENST00000547528 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
SART3-208ENST00000547528 VPS8Q8N3P4 1428 aa21.23■□□□□ 0.99
SART3-208ENST00000547528 CUX2O14529 1486 aa21.22■□□□□ 0.99
SART3-208ENST00000547528 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
SART3-208ENST00000547528 ABCA10Q8WWZ4 1543 aa21.17■□□□□ 0.98
SART3-208ENST00000547528 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
SART3-208ENST00000547528 PRXQ9BXM0 1461 aa21.17■□□□□ 0.98
SART3-208ENST00000547528 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
SART3-208ENST00000547528 TDRD9Q8NDG6 1382 aaKnown RBP21.13■□□□□ 0.97
SART3-208ENST00000547528 TTBK1Q5TCY1 1321 aaPredicted RBP21.1■□□□□ 0.97
SART3-208ENST00000547528 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
SART3-208ENST00000547528 ZNF608Q9ULD9 1512 aaPredicted RBP21.06■□□□□ 0.96
SART3-208ENST00000547528 ABCA5Q8WWZ7 1642 aa21.05■□□□□ 0.96
SART3-208ENST00000547528 IGF1RP08069 1367 aa21.04■□□□□ 0.96
SART3-208ENST00000547528 AQRO60306 1485 aaKnown RBP eCLIP21.04■□□□□ 0.963e-7■■■□□ 18
SART3-208ENST00000547528 GAPVD1Q14C86 1478 aa21.02■□□□□ 0.96
SART3-208ENST00000547528 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
SART3-208ENST00000547528 APLP2Q06481 763 aa20.98■□□□□ 0.95
SART3-208ENST00000547528 EIF4G3O43432 1585 aaKnown RBP20.95■□□□□ 0.94
SART3-208ENST00000547528 PBRM1Q86U86 1689 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms