RNA–Protein interactions for RNA: ENST00000547458.5

ACTR6-203, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 4

Gene ACTR6, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-203ENST00000547458 AEBP2Q6ZN18 517 aaPredicted RBP36.6■■■■□ 3.45
ACTR6-203ENST00000547458 CHIC1Q5VXU3 224 aa34.38■■■■□ 3.09
ACTR6-203ENST00000547458 SENP3Q9H4L4 574 aaPredicted RBP31.22■■■□□ 2.59
ACTR6-203ENST00000547458 PHF23Q9BUL5 403 aaPredicted RBP30.8■■■□□ 2.52
ACTR6-203ENST00000547458 FOXD1Q16676 465 aa29.18■■■□□ 2.26
ACTR6-203ENST00000547458 MSH5O43196 834 aa27.4■■□□□ 1.98
ACTR6-203ENST00000547458 POTEDQ86YR6 584 aa27.36■■□□□ 1.97
ACTR6-203ENST00000547458 PLPPR3Q6T4P5 718 aa27.31■■□□□ 1.96
ACTR6-203ENST00000547458 PIAS4Q8N2W9 510 aaPredicted RBP27.18■■□□□ 1.94
ACTR6-203ENST00000547458 PPP6R1Q9UPN7 881 aa27.05■■□□□ 1.92
ACTR6-203ENST00000547458 ADRA2BP18089 450 aa26.94■■□□□ 1.9
ACTR6-203ENST00000547458 MAPK8IP2Q13387 824 aaPredicted RBP24.87■■□□□ 1.57
ACTR6-203ENST00000547458 DMRT2Q9Y5R5 561 aa24.71■■□□□ 1.55
ACTR6-203ENST00000547458 SCAF1Q9H7N4 1312 aaKnown RBP24.6■■□□□ 1.53
ACTR6-203ENST00000547458 PPP4R3CPQ6ZMV5 832 aa23.92■■□□□ 1.42
ACTR6-203ENST00000547458 DCAF8L1A6NGE4 600 aa23.78■■□□□ 1.4
ACTR6-203ENST00000547458 CACNB1Q02641 598 aaPredicted RBP23.77■■□□□ 1.4
ACTR6-203ENST00000547458 HOXD11P31277 338 aaPredicted RBP23.66■■□□□ 1.38
ACTR6-203ENST00000547458 CNKSR2Q8WXI2 1034 aa23.53■■□□□ 1.36
ACTR6-203ENST00000547458 RNF216Q9NWF9 866 aaPredicted RBP23.4■■□□□ 1.34
ACTR6-203ENST00000547458 RNF39Q9H2S5 420 aa23.37■■□□□ 1.33
ACTR6-203ENST00000547458 C1QBPQ07021 282 aaKnown RBP22.98■■□□□ 1.27
ACTR6-203ENST00000547458 NCBP3Q53F19 620 aaKnown RBP22.87■■□□□ 1.25
ACTR6-203ENST00000547458 DNAJC5BQ9UF47 199 aa22.86■■□□□ 1.25
ACTR6-203ENST00000547458 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.59■■□□□ 1.21
ACTR6-203ENST00000547458 NPM3O75607 178 aaKnown RBP22.56■■□□□ 1.2
ACTR6-203ENST00000547458 U3KPZ7 1027 aaPredicted RBP22.06■■□□□ 1.12
ACTR6-203ENST00000547458 SPINK5Q9NQ38 1064 aaPredicted RBP21.87■■□□□ 1.09
ACTR6-203ENST00000547458 CAPN15O75808 1086 aa21.84■■□□□ 1.09
ACTR6-203ENST00000547458 KCNA4P22459 653 aa21.84■■□□□ 1.09
ACTR6-203ENST00000547458 DSG3P32926 999 aa21.77■■□□□ 1.08
ACTR6-203ENST00000547458 SLC4A2P04920 1241 aa21.64■■□□□ 1.05
ACTR6-203ENST00000547458 TRHP20396 242 aaPredicted RBP21.42■■□□□ 1.02
ACTR6-203ENST00000547458 POTEHQ6S545 545 aa21.38■■□□□ 1.01
ACTR6-203ENST00000547458 APLP2Q06481 763 aa21.35■■□□□ 1.01
ACTR6-203ENST00000547458 ABCB7O75027 752 aa21.33■■□□□ 1.01
ACTR6-203ENST00000547458 ZNF219Q9P2Y4 722 aaPredicted RBP21.32■■□□□ 1
ACTR6-203ENST00000547458 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.27■■□□□ 1
ACTR6-203ENST00000547458 HNRNPUL2Q1KMD3 747 aaKnown RBP21.27■■□□□ 1
ACTR6-203ENST00000547458 SAMD1Q6SPF0 538 aaPredicted RBP21.15■□□□□ 0.98
ACTR6-203ENST00000547458 MYCNP04198 464 aaPredicted RBP20.85■□□□□ 0.93
ACTR6-203ENST00000547458 POLA2Q14181 598 aa20.76■□□□□ 0.91
ACTR6-203ENST00000547458 RBM42Q9BTD8 480 aaKnown RBP20.75■□□□□ 0.91
ACTR6-203ENST00000547458 SLC4A1APQ9BWU0 796 aaKnown RBP20.54■□□□□ 0.88
ACTR6-203ENST00000547458 CHRDL2Q6WN34 429 aa20.47■□□□□ 0.87
ACTR6-203ENST00000547458 FOXD4L1Q9NU39 408 aa20.46■□□□□ 0.87
ACTR6-203ENST00000547458 ATF5Q9Y2D1 282 aaPredicted RBP20.46■□□□□ 0.87
ACTR6-203ENST00000547458 ZBTB12Q9Y330 459 aaPredicted RBP20.25■□□□□ 0.83
ACTR6-203ENST00000547458 AKT1S1Q96B36 256 aa20.21■□□□□ 0.83
ACTR6-203ENST00000547458 OSCARQ8IYS5 282 aa20.11■□□□□ 0.81
ACTR6-203ENST00000547458 ZBTB22O15209 634 aa20.09■□□□□ 0.81
ACTR6-203ENST00000547458 REM2Q8IYK8 340 aaPredicted RBP20.06■□□□□ 0.8
ACTR6-203ENST00000547458 PIP4P2Q8N4L2 257 aa19.92■□□□□ 0.78
ACTR6-203ENST00000547458 SP7Q8TDD2 431 aaPredicted RBP19.87■□□□□ 0.77
ACTR6-203ENST00000547458 PITPNM1O00562 1244 aa19.85■□□□□ 0.77
ACTR6-203ENST00000547458 ATXN8OSP0DMR3 200 aa19.83■□□□□ 0.77
ACTR6-203ENST00000547458 FXR2P51116 673 aaKnown RBP eCLIP19.72■□□□□ 0.75
ACTR6-203ENST00000547458 HAX1O00165 279 aa19.67■□□□□ 0.74
ACTR6-203ENST00000547458 FBLN2P98095 1184 aa19.64■□□□□ 0.73
ACTR6-203ENST00000547458 SPDYE2BA6NHP3 402 aa19.61■□□□□ 0.73
ACTR6-203ENST00000547458 SPDYE6P0CI01 402 aa19.61■□□□□ 0.73
ACTR6-203ENST00000547458 SPDYE2Q495Y8 402 aa19.61■□□□□ 0.73
ACTR6-203ENST00000547458 MKRN4PQ13434 485 aaPredicted RBP19.48■□□□□ 0.71
ACTR6-203ENST00000547458 EVX2Q03828 476 aa19.41■□□□□ 0.7
ACTR6-203ENST00000547458 CLEC11AQ9Y240 323 aa19.4■□□□□ 0.7
ACTR6-203ENST00000547458 SPDYE1Q8NFV5 336 aaPredicted RBP19.36■□□□□ 0.69
ACTR6-203ENST00000547458 ZNF692Q9BU19 519 aaPredicted RBP19.36■□□□□ 0.69
ACTR6-203ENST00000547458 PRKAR2AP13861 404 aaKnown RBP19.34■□□□□ 0.69
ACTR6-203ENST00000547458 SSUH2Q9Y2M2 353 aa19.32■□□□□ 0.68
ACTR6-203ENST00000547458 C19orf67A6NJJ6 358 aa19.11■□□□□ 0.65
ACTR6-203ENST00000547458 CHADLQ6NUI6 762 aa19.07■□□□□ 0.64
ACTR6-203ENST00000547458 PABPN1Q86U42 306 aaKnown RBP eCLIP19.07■□□□□ 0.64
ACTR6-203ENST00000547458 PRR29P0C7W0 189 aa19.01■□□□□ 0.63
ACTR6-203ENST00000547458 GABBR2O75899 941 aa18.93■□□□□ 0.62
ACTR6-203ENST00000547458 CSRNP3Q8WYN3 585 aa18.84■□□□□ 0.61
ACTR6-203ENST00000547458 FARP1Q9Y4F1 1045 aaPredicted RBP18.72■□□□□ 0.59
ACTR6-203ENST00000547458 CD44P16070 742 aaKnown RBP18.7■□□□□ 0.58
ACTR6-203ENST00000547458 LHX8Q68G74 356 aa18.65■□□□□ 0.58
ACTR6-203ENST00000547458 POTEIP0CG38 1075 aa18.54■□□□□ 0.56
ACTR6-203ENST00000547458 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
ACTR6-203ENST00000547458 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
ACTR6-203ENST00000547458 CLCN6P51797 869 aa18.44■□□□□ 0.54
ACTR6-203ENST00000547458 STAG3Q9UJ98 1225 aa18.42■□□□□ 0.54
ACTR6-203ENST00000547458 ZRANB1Q9UGI0 708 aa18.39■□□□□ 0.53
ACTR6-203ENST00000547458 SPDYE4A6NLX3 237 aa18.38■□□□□ 0.53
ACTR6-203ENST00000547458 ZNF579Q8NAF0 562 aaKnown RBP18.36■□□□□ 0.53
ACTR6-203ENST00000547458 DCBLD2Q96PD2 775 aa18.35■□□□□ 0.53
ACTR6-203ENST00000547458 GALR2O43603 387 aaPredicted RBP18.21■□□□□ 0.51
ACTR6-203ENST00000547458 PAK3O75914 559 aaPredicted RBP18.14■□□□□ 0.49
ACTR6-203ENST00000547458 PHF12Q96QT6 1004 aa18.12■□□□□ 0.49
ACTR6-203ENST00000547458 NPM1P06748 294 aaKnown RBP eCLIP18.08■□□□□ 0.48
ACTR6-203ENST00000547458 MNX1P50219 401 aaPredicted RBP18.08■□□□□ 0.48
ACTR6-203ENST00000547458 POTEB2H3BUK9 544 aa17.93■□□□□ 0.46
ACTR6-203ENST00000547458 OTUD5Q96G74 571 aa17.92■□□□□ 0.46
ACTR6-203ENST00000547458 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
ACTR6-203ENST00000547458 MS4A3Q96HJ5 214 aa17.85■□□□□ 0.45
ACTR6-203ENST00000547458 PROM2Q8N271 834 aa17.84■□□□□ 0.45
ACTR6-203ENST00000547458 TSPYL2Q9H2G4 693 aaPredicted RBP17.79■□□□□ 0.44
ACTR6-203ENST00000547458 ASTLQ6HA08 431 aaPredicted RBP17.77■□□□□ 0.44
ACTR6-203ENST00000547458 PLSCR2Q9NRY7 297 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms