RNA–Protein interactions for RNA: ENST00000547317.5

USP15-207, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 499 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-207ENST00000547317 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
USP15-207ENST00000547317 AEBP2Q6ZN18 517 aaPredicted RBP20.33■□□□□ 0.85
USP15-207ENST00000547317 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
USP15-207ENST00000547317 SENP3Q9H4L4 574 aaPredicted RBP17.1■□□□□ 0.33
USP15-207ENST00000547317 PLPPR3Q6T4P5 718 aa16.94■□□□□ 0.3
USP15-207ENST00000547317 ADRA2BP18089 450 aa15.87■□□□□ 0.13
USP15-207ENST00000547317 FOXD1Q16676 465 aa15.81■□□□□ 0.12
USP15-207ENST00000547317 PPP6R1Q9UPN7 881 aa15.75■□□□□ 0.11
USP15-207ENST00000547317 KCNA4P22459 653 aa15.46■□□□□ 0.07
USP15-207ENST00000547317 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
USP15-207ENST00000547317 PIAS4Q8N2W9 510 aaPredicted RBP15.04■□□□□ -0
USP15-207ENST00000547317 PPP4R3CPQ6ZMV5 832 aa15.01□□□□□ -0.01
USP15-207ENST00000547317 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
USP15-207ENST00000547317 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
USP15-207ENST00000547317 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
USP15-207ENST00000547317 NPM3O75607 178 aaKnown RBP14.62□□□□□ -0.07
USP15-207ENST00000547317 POTEDQ86YR6 584 aa14.58□□□□□ -0.08
USP15-207ENST00000547317 CNKSR2Q8WXI2 1034 aa14.43□□□□□ -0.1
USP15-207ENST00000547317 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
USP15-207ENST00000547317 ZBTB22O15209 634 aa14.28□□□□□ -0.12
USP15-207ENST00000547317 MSH5O43196 834 aa14.28□□□□□ -0.12
USP15-207ENST00000547317 DNAJC5BQ9UF47 199 aa14.14□□□□□ -0.15
USP15-207ENST00000547317 MAPK8IP2Q13387 824 aaPredicted RBP14.1□□□□□ -0.15
USP15-207ENST00000547317 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.17
USP15-207ENST00000547317 RNF216Q9NWF9 866 aaPredicted RBP14□□□□□ -0.17
USP15-207ENST00000547317 HOXD11P31277 338 aaPredicted RBP13.77□□□□□ -0.21
USP15-207ENST00000547317 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.21
USP15-207ENST00000547317 SLC4A2P04920 1241 aa13.65□□□□□ -0.22
USP15-207ENST00000547317 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
USP15-207ENST00000547317 ATXN8OSP0DMR3 200 aa13.48□□□□□ -0.25
USP15-207ENST00000547317 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
USP15-207ENST00000547317 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
USP15-207ENST00000547317 FKBP8Q14318 412 aa13.24□□□□□ -0.29
USP15-207ENST00000547317 SLC24A1O60721 1099 aa13.13□□□□□ -0.31
USP15-207ENST00000547317 ATF5Q9Y2D1 282 aaPredicted RBP13.09□□□□□ -0.31
USP15-207ENST00000547317 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
USP15-207ENST00000547317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.07□□□□□ -0.323e-8■□□□□ 10.5
USP15-207ENST00000547317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
USP15-207ENST00000547317 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
USP15-207ENST00000547317 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
USP15-207ENST00000547317 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
USP15-207ENST00000547317 ZNF219Q9P2Y4 722 aaPredicted RBP12.78□□□□□ -0.36
USP15-207ENST00000547317 APLP2Q06481 763 aa12.7□□□□□ -0.38
USP15-207ENST00000547317 SPDYE4A6NLX3 237 aa12.58□□□□□ -0.4
USP15-207ENST00000547317 MKRN4PQ13434 485 aaPredicted RBP12.57□□□□□ -0.4
USP15-207ENST00000547317 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
USP15-207ENST00000547317 PROM2Q8N271 834 aa12.53□□□□□ -0.4
USP15-207ENST00000547317 FBLN2P98095 1184 aa12.43□□□□□ -0.42
USP15-207ENST00000547317 VASPP50552 380 aaPredicted RBP12.41□□□□□ -0.42
USP15-207ENST00000547317 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
USP15-207ENST00000547317 TRHP20396 242 aaPredicted RBP12.39□□□□□ -0.43
USP15-207ENST00000547317 POLA2Q14181 598 aa12.37□□□□□ -0.43
USP15-207ENST00000547317 RNF39Q9H2S5 420 aa12.33□□□□□ -0.44
USP15-207ENST00000547317 IFNLR1Q8IU57 520 aaPredicted RBP12.31□□□□□ -0.44
USP15-207ENST00000547317 CAPN15O75808 1086 aa12.29□□□□□ -0.44
USP15-207ENST00000547317 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
USP15-207ENST00000547317 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
USP15-207ENST00000547317 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.45
USP15-207ENST00000547317 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
USP15-207ENST00000547317 PKD2Q13563 968 aa12.18□□□□□ -0.46
USP15-207ENST00000547317 ABCB7O75027 752 aa12.13□□□□□ -0.47
USP15-207ENST00000547317 DCAF8L2P0C7V8 631 aa12.1□□□□□ -0.47
USP15-207ENST00000547317 HAP1P54257 671 aaPredicted RBP12.04□□□□□ -0.48
USP15-207ENST00000547317 SPOCK2Q92563 424 aa12.02□□□□□ -0.49
USP15-207ENST00000547317 KLHL34Q8N239 644 aa11.99□□□□□ -0.49
USP15-207ENST00000547317 ZNF692Q9BU19 519 aaPredicted RBP11.99□□□□□ -0.49
USP15-207ENST00000547317 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
USP15-207ENST00000547317 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
USP15-207ENST00000547317 DSG3P32926 999 aa11.96□□□□□ -0.49
USP15-207ENST00000547317 SPDYE2BA6NHP3 402 aa11.95□□□□□ -0.5
USP15-207ENST00000547317 SPDYE6P0CI01 402 aa11.95□□□□□ -0.5
USP15-207ENST00000547317 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
USP15-207ENST00000547317 OSCARQ8IYS5 282 aa11.94□□□□□ -0.5
USP15-207ENST00000547317 ECM2O94769 699 aaPredicted RBP11.92□□□□□ -0.5
USP15-207ENST00000547317 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
USP15-207ENST00000547317 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
USP15-207ENST00000547317 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
USP15-207ENST00000547317 PABPN1Q86U42 306 aaKnown RBP eCLIP11.87□□□□□ -0.51
USP15-207ENST00000547317 NPM1P06748 294 aaKnown RBP eCLIP11.86□□□□□ -0.51
USP15-207ENST00000547317 BCANQ96GW7 911 aa11.85□□□□□ -0.51
USP15-207ENST00000547317 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.85□□□□□ -0.51
USP15-207ENST00000547317 RGL2O15211 777 aa11.82□□□□□ -0.52
USP15-207ENST00000547317 MIER1Q8N108 512 aa11.82□□□□□ -0.52
USP15-207ENST00000547317 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
USP15-207ENST00000547317 KDM2AQ9Y2K7 1162 aa11.76□□□□□ -0.53
USP15-207ENST00000547317 CFAP44Q96MT7 982 aa11.73□□□□□ -0.53
USP15-207ENST00000547317 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
USP15-207ENST00000547317 TAOK2Q9UL54 1235 aa11.69□□□□□ -0.54
USP15-207ENST00000547317 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
USP15-207ENST00000547317 CIZ1Q9ULV3 898 aaPredicted RBP11.68□□□□□ -0.54
USP15-207ENST00000547317 PLEKHG5O94827 1062 aa11.67□□□□□ -0.54
USP15-207ENST00000547317 PRKCSHP14314 528 aaPredicted RBP11.67□□□□□ -0.54
USP15-207ENST00000547317 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
USP15-207ENST00000547317 TRIM41Q8WV44 630 aa11.63□□□□□ -0.55
USP15-207ENST00000547317 TSHZ2Q9NRE2 1034 aa11.62□□□□□ -0.55
USP15-207ENST00000547317 HS6ST3Q8IZP7 471 aa11.56□□□□□ -0.56
USP15-207ENST00000547317 GSE1Q14687 1217 aa11.53□□□□□ -0.56
USP15-207ENST00000547317 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
USP15-207ENST00000547317 DNAJC5Q9H3Z4 198 aa11.52□□□□□ -0.57
USP15-207ENST00000547317 NUBP1P53384 320 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms