RNA–Protein interactions for RNA: ENST00000546962.5

TMEM116-204, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-204ENST00000546962 CHIC1Q5VXU3 224 aa10.55□□□□□ -0.72
TMEM116-204ENST00000546962 AEBP2Q6ZN18 517 aaPredicted RBP10.51□□□□□ -0.73
TMEM116-204ENST00000546962 PHF23Q9BUL5 403 aaPredicted RBP9.36□□□□□ -0.91
TMEM116-204ENST00000546962 SENP3Q9H4L4 574 aaPredicted RBP8.8□□□□□ -1
TMEM116-204ENST00000546962 PLPPR3Q6T4P5 718 aa8.69□□□□□ -1.02
TMEM116-204ENST00000546962 POTEDQ86YR6 584 aa8.21□□□□□ -1.1
TMEM116-204ENST00000546962 ADRA2BP18089 450 aa8.2□□□□□ -1.1
TMEM116-204ENST00000546962 FOXD1Q16676 465 aa8.18□□□□□ -1.1
TMEM116-204ENST00000546962 PPP6R1Q9UPN7 881 aa8.16□□□□□ -1.1
TMEM116-204ENST00000546962 KCNA4P22459 653 aa7.94□□□□□ -1.14
TMEM116-204ENST00000546962 EHMT2Q96KQ7 1210 aa7.76□□□□□ -1.17
TMEM116-204ENST00000546962 PIAS4Q8N2W9 510 aaPredicted RBP7.75□□□□□ -1.17
TMEM116-204ENST00000546962 PPP4R3CPQ6ZMV5 832 aa7.73□□□□□ -1.17
TMEM116-204ENST00000546962 SLC4A1APQ9BWU0 796 aaKnown RBP7.59□□□□□ -1.19
TMEM116-204ENST00000546962 NCBP3Q53F19 620 aaKnown RBP7.58□□□□□ -1.2
TMEM116-204ENST00000546962 CSRNP3Q8WYN3 585 aa7.55□□□□□ -1.2
TMEM116-204ENST00000546962 NPM3O75607 178 aaKnown RBP7.51□□□□□ -1.21
TMEM116-204ENST00000546962 MSH5O43196 834 aa7.48□□□□□ -1.21
TMEM116-204ENST00000546962 NISCHQ9Y2I1 1504 aa7.45□□□□□ -1.22
TMEM116-204ENST00000546962 CNKSR2Q8WXI2 1034 aa7.42□□□□□ -1.22
TMEM116-204ENST00000546962 SCAF1Q9H7N4 1312 aaKnown RBP7.39□□□□□ -1.23
TMEM116-204ENST00000546962 ZBTB22O15209 634 aa7.32□□□□□ -1.24
TMEM116-204ENST00000546962 MAPK8IP2Q13387 824 aaPredicted RBP7.32□□□□□ -1.24
TMEM116-204ENST00000546962 DNAJC5BQ9UF47 199 aa7.23□□□□□ -1.25
TMEM116-204ENST00000546962 RNF216Q9NWF9 866 aaPredicted RBP7.19□□□□□ -1.26
TMEM116-204ENST00000546962 ABCC9O60706 1549 aa7.18□□□□□ -1.26
TMEM116-204ENST00000546962 FOXD4L1Q9NU39 408 aa7.17□□□□□ -1.26
TMEM116-204ENST00000546962 DMRT2Q9Y5R5 561 aa7.09□□□□□ -1.27
TMEM116-204ENST00000546962 HOXD11P31277 338 aaPredicted RBP7.08□□□□□ -1.28
TMEM116-204ENST00000546962 SLC4A2P04920 1241 aa7.03□□□□□ -1.28
TMEM116-204ENST00000546962 MYCNP04198 464 aaPredicted RBP6.9□□□□□ -1.3
TMEM116-204ENST00000546962 ATXN8OSP0DMR3 200 aa6.88□□□□□ -1.31
TMEM116-204ENST00000546962 DNAJC5Q9H3Z4 198 aa6.82□□□□□ -1.32
TMEM116-204ENST00000546962 FKBP8Q14318 412 aa6.78□□□□□ -1.32
TMEM116-204ENST00000546962 CCDC180Q9P1Z9 1646 aa6.77□□□□□ -1.33
TMEM116-204ENST00000546962 RTN4Q9NQC3 1192 aaKnown RBP6.77□□□□□ -1.33
TMEM116-204ENST00000546962 DCAF8L1A6NGE4 600 aa6.76□□□□□ -1.33
TMEM116-204ENST00000546962 ATF5Q9Y2D1 282 aaPredicted RBP6.76□□□□□ -1.33
TMEM116-204ENST00000546962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.74□□□□□ -1.33
TMEM116-204ENST00000546962 AMER1Q5JTC6 1135 aaPredicted RBP6.72□□□□□ -1.33
TMEM116-204ENST00000546962 U3KPZ7 1027 aaPredicted RBP6.69□□□□□ -1.34
TMEM116-204ENST00000546962 RB1CC1Q8TDY2 1594 aa6.69□□□□□ -1.34
TMEM116-204ENST00000546962 CACNB1Q02641 598 aaPredicted RBP6.68□□□□□ -1.34
TMEM116-204ENST00000546962 PABPN1Q86U42 306 aaKnown RBP eCLIP6.68□□□□□ -1.34
TMEM116-204ENST00000546962 SAMD1Q6SPF0 538 aaPredicted RBP6.66□□□□□ -1.34
TMEM116-204ENST00000546962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.65□□□□□ -1.34
TMEM116-204ENST00000546962 HNRNPUL2Q1KMD3 747 aaKnown RBP6.65□□□□□ -1.34
TMEM116-204ENST00000546962 SLC24A1O60721 1099 aa6.61□□□□□ -1.35
TMEM116-204ENST00000546962 ZNF219Q9P2Y4 722 aaPredicted RBP6.57□□□□□ -1.36
TMEM116-204ENST00000546962 NACADO15069 1562 aa6.56□□□□□ -1.36
TMEM116-204ENST00000546962 DCAF8L2P0C7V8 631 aa6.55□□□□□ -1.36
TMEM116-204ENST00000546962 CECR2Q9BXF3 1484 aa6.53□□□□□ -1.36
TMEM116-204ENST00000546962 APLP2Q06481 763 aa6.49□□□□□ -1.37
TMEM116-204ENST00000546962 MKRN4PQ13434 485 aaPredicted RBP6.47□□□□□ -1.37
TMEM116-204ENST00000546962 SPDYE4A6NLX3 237 aa6.45□□□□□ -1.38
TMEM116-204ENST00000546962 BICRAQ9NZM4 1560 aa6.44□□□□□ -1.38
TMEM116-204ENST00000546962 CC2D2AQ9P2K1 1620 aa6.43□□□□□ -1.38
TMEM116-204ENST00000546962 SPINK5Q9NQ38 1064 aaPredicted RBP6.42□□□□□ -1.38
TMEM116-204ENST00000546962 SHROOM4Q9ULL8 1493 aa6.41□□□□□ -1.38
TMEM116-204ENST00000546962 TRHP20396 242 aaPredicted RBP6.41□□□□□ -1.38
TMEM116-204ENST00000546962 PROM2Q8N271 834 aa6.4□□□□□ -1.38
TMEM116-204ENST00000546962 FBXO3Q9UK99 471 aa6.4□□□□□ -1.38
TMEM116-204ENST00000546962 FBLN2P98095 1184 aa6.38□□□□□ -1.39
TMEM116-204ENST00000546962 POLA2Q14181 598 aa6.38□□□□□ -1.39
TMEM116-204ENST00000546962 MYO15BQ96JP2 1530 aa6.37□□□□□ -1.39
TMEM116-204ENST00000546962 CUX2O14529 1486 aa6.37□□□□□ -1.39
TMEM116-204ENST00000546962 TRIM41Q8WV44 630 aa6.36□□□□□ -1.39
TMEM116-204ENST00000546962 RNF39Q9H2S5 420 aa6.36□□□□□ -1.39
TMEM116-204ENST00000546962 UNC13AQ9UPW8 1703 aa6.34□□□□□ -1.39
TMEM116-204ENST00000546962 CAPN15O75808 1086 aa6.34□□□□□ -1.39
TMEM116-204ENST00000546962 EIF4G1Q04637 1599 aaKnown RBP6.34□□□□□ -1.39
TMEM116-204ENST00000546962 VASPP50552 380 aaPredicted RBP6.33□□□□□ -1.4
TMEM116-204ENST00000546962 POTEHQ6S545 545 aa6.33□□□□□ -1.4
TMEM116-204ENST00000546962 IFNLR1Q8IU57 520 aaPredicted RBP6.3□□□□□ -1.4
TMEM116-204ENST00000546962 C1QBPQ07021 282 aaKnown RBP6.28□□□□□ -1.4
TMEM116-204ENST00000546962 ABCB7O75027 752 aa6.27□□□□□ -1.41
TMEM116-204ENST00000546962 ERCC6Q03468 1493 aa6.27□□□□□ -1.41
TMEM116-204ENST00000546962 ZBTB12Q9Y330 459 aaPredicted RBP6.24□□□□□ -1.41
TMEM116-204ENST00000546962 PKD2Q13563 968 aa6.23□□□□□ -1.41
TMEM116-204ENST00000546962 PLCB2Q00722 1185 aa6.22□□□□□ -1.41
TMEM116-204ENST00000546962 SCRIBQ14160 1630 aa6.2□□□□□ -1.42
TMEM116-204ENST00000546962 DSG3P32926 999 aa6.18□□□□□ -1.42
TMEM116-204ENST00000546962 ZNF692Q9BU19 519 aaPredicted RBP6.18□□□□□ -1.42
TMEM116-204ENST00000546962 KLHL34Q8N239 644 aa6.15□□□□□ -1.42
TMEM116-204ENST00000546962 SPOCK2Q92563 424 aa6.15□□□□□ -1.42
TMEM116-204ENST00000546962 DCAF1Q9Y4B6 1507 aa6.15□□□□□ -1.43
TMEM116-204ENST00000546962 HAP1P54257 671 aaPredicted RBP6.14□□□□□ -1.43
TMEM116-204ENST00000546962 STAG3Q9UJ98 1225 aa6.14□□□□□ -1.43
TMEM116-204ENST00000546962 SPDYE2BA6NHP3 402 aa6.13□□□□□ -1.43
TMEM116-204ENST00000546962 SPDYE6P0CI01 402 aa6.13□□□□□ -1.43
TMEM116-204ENST00000546962 SPDYE2Q495Y8 402 aa6.13□□□□□ -1.43
TMEM116-204ENST00000546962 OSCARQ8IYS5 282 aa6.13□□□□□ -1.43
TMEM116-204ENST00000546962 SSUH2Q9Y2M2 353 aa6.13□□□□□ -1.43
TMEM116-204ENST00000546962 ECM2O94769 699 aaPredicted RBP6.1□□□□□ -1.43
TMEM116-204ENST00000546962 NCAPD3P42695 1498 aa6.09□□□□□ -1.43
TMEM116-204ENST00000546962 NPM1P06748 294 aaKnown RBP eCLIP6.09□□□□□ -1.43
TMEM116-204ENST00000546962 MIER1Q8N108 512 aa6.09□□□□□ -1.43
TMEM116-204ENST00000546962 PLCD3Q8N3E9 789 aa6.09□□□□□ -1.43
TMEM116-204ENST00000546962 ZCCHC6Q5VYS8 1495 aaKnown RBP6.08□□□□□ -1.44
TMEM116-204ENST00000546962 BBXQ8WY36 941 aaPredicted RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 178.2 ms