RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
DDX54-203ENST00000546869 KRTAP19-3Q7Z4W3 81 aa5.28□□□□□ -1.56
DDX54-203ENST00000546869 CDC42SE1Q9NRR8 79 aa5.28□□□□□ -1.56
DDX54-203ENST00000546869 MT1GP13640 62 aa5.21□□□□□ -1.58
DDX54-203ENST00000546869 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
DDX54-203ENST00000546869 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
DDX54-203ENST00000546869 KRTAP2-1Q9BYU5 128 aa5.2□□□□□ -1.58
DDX54-203ENST00000546869 MT1LQ93083 61 aa5.18□□□□□ -1.58
DDX54-203ENST00000546869 LCE3BQ5TA77 95 aa5.17□□□□□ -1.58
DDX54-203ENST00000546869 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
DDX54-203ENST00000546869 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
DDX54-203ENST00000546869 ROMO1P60602 79 aa5.13□□□□□ -1.59
DDX54-203ENST00000546869 MT1MQ8N339 61 aa5.08□□□□□ -1.6
DDX54-203ENST00000546869 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
DDX54-203ENST00000546869 DSTQ03001 7570 aaKnown RBP4.92□□□□□ -1.62
DDX54-203ENST00000546869 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
DDX54-203ENST00000546869 BRK1Q8WUW1 75 aa4.92□□□□□ -1.62
DDX54-203ENST00000546869 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
DDX54-203ENST00000546869 GPR98Q8WXG9 6306 aa4.9□□□□□ -1.63
DDX54-203ENST00000546869 KRTAP4-7Q9BYR0 210 aa4.88□□□□□ -1.63
DDX54-203ENST00000546869 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
DDX54-203ENST00000546869 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
DDX54-203ENST00000546869 KRTAP5-4Q6L8H1 288 aa4.75□□□□□ -1.65
DDX54-203ENST00000546869 KRTAP4-9Q9BYQ8 210 aa4.7□□□□□ -1.66
DDX54-203ENST00000546869 PMAIP1Q13794 54 aa4.67□□□□□ -1.66
DDX54-203ENST00000546869 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
DDX54-203ENST00000546869 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
DDX54-203ENST00000546869 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
DDX54-203ENST00000546869 MT4P47944 62 aa4.6□□□□□ -1.67
DDX54-203ENST00000546869 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
DDX54-203ENST00000546869 PRO0628Q9UI54 55 aa4.55□□□□□ -1.68
DDX54-203ENST00000546869 HMCN1Q96RW7 5635 aa4.52□□□□□ -1.69
DDX54-203ENST00000546869 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
DDX54-203ENST00000546869 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
DDX54-203ENST00000546869 KRTAP9-6A8MVA2 160 aa4.48□□□□□ -1.69
DDX54-203ENST00000546869 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
DDX54-203ENST00000546869 MT1AP04731 61 aa4.42□□□□□ -1.7
DDX54-203ENST00000546869 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
DDX54-203ENST00000546869 KRTAP4-12Q9BQ66 201 aa4.41□□□□□ -1.7
DDX54-203ENST00000546869 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
DDX54-203ENST00000546869 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
DDX54-203ENST00000546869 KRTAP6-1Q3LI64 71 aa4.34□□□□□ -1.71
DDX54-203ENST00000546869 SYNE1Q8NF91 8797 aaKnown RBP4.32□□□□□ -1.72
DDX54-203ENST00000546869 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
DDX54-203ENST00000546869 KRTAP5-10Q6L8G5 202 aa4.28□□□□□ -1.72
DDX54-203ENST00000546869 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
DDX54-203ENST00000546869 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
DDX54-203ENST00000546869 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
DDX54-203ENST00000546869 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
DDX54-203ENST00000546869 KRTAP9-9Q9BYP9 154 aa4.15□□□□□ -1.75
DDX54-203ENST00000546869 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
DDX54-203ENST00000546869 MT3P25713 68 aa4.04□□□□□ -1.76
DDX54-203ENST00000546869 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
DDX54-203ENST00000546869 KRTAP5-8O75690 187 aa3.85□□□□□ -1.79
DDX54-203ENST00000546869 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
DDX54-203ENST00000546869 LUZP6Q538Z0 58 aa3.72□□□□□ -1.81
DDX54-203ENST00000546869 MUC5ACP98088 5654 aa3.72□□□□□ -1.81
DDX54-203ENST00000546869 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
DDX54-203ENST00000546869 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
DDX54-203ENST00000546869 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
DDX54-203ENST00000546869 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
DDX54-203ENST00000546869 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
DDX54-203ENST00000546869 LCE3DQ9BYE3 92 aa3.5□□□□□ -1.85
DDX54-203ENST00000546869 NDUFAF8A1L188 74 aa3.42□□□□□ -1.86
DDX54-203ENST00000546869 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
DDX54-203ENST00000546869 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
DDX54-203ENST00000546869 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
DDX54-203ENST00000546869 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
DDX54-203ENST00000546869 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
DDX54-203ENST00000546869 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
DDX54-203ENST00000546869 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
DDX54-203ENST00000546869 INE1O15225 51 aa2.66□□□□□ -1.98
DDX54-203ENST00000546869 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
DDX54-203ENST00000546869 PRM1P04553 51 aa2.6□□□□□ -1.99
DDX54-203ENST00000546869 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
DDX54-203ENST00000546869 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
DDX54-203ENST00000546869 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
DDX54-203ENST00000546869 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 7.9 ms