RNA–Protein interactions for RNA: ENST00000546728.5

SART3-204, Transcript of squamous cell carcinoma antigen recognized by T cells 3, humanhuman

TSL 1 (best)

Gene SART3, Length 3,637 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SART3-204ENST00000546728 NISCHQ9Y2I1 1504 aa16.41■□□□□ 0.22
SART3-204ENST00000546728 SUPT5HO00267 1087 aaKnown RBP14.55□□□□□ -0.08
SART3-204ENST00000546728 SHROOM4Q9ULL8 1493 aa14.43□□□□□ -0.1
SART3-204ENST00000546728 DCAF8L2P0C7V8 631 aa14.43□□□□□ -0.1
SART3-204ENST00000546728 PCGF6Q9BYE7 350 aa14.17□□□□□ -0.14
SART3-204ENST00000546728 EHMT2Q96KQ7 1210 aa14.03□□□□□ -0.16
SART3-204ENST00000546728 CCDC180Q9P1Z9 1646 aa13.98□□□□□ -0.17
SART3-204ENST00000546728 PPARGC1BQ86YN6 1023 aaKnown RBP13.96□□□□□ -0.18
SART3-204ENST00000546728 HRCP23327 699 aa13.82□□□□□ -0.2
SART3-204ENST00000546728 ABCC9O60706 1549 aa13.78□□□□□ -0.2
SART3-204ENST00000546728 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
SART3-204ENST00000546728 FAM9AQ8IZU1 332 aaPredicted RBP13.68□□□□□ -0.22
SART3-204ENST00000546728 LOC105371045A0A1W2PR82 267 aa13.63□□□□□ -0.23
SART3-204ENST00000546728 TTBK1Q5TCY1 1321 aaPredicted RBP13.59□□□□□ -0.23
SART3-204ENST00000546728 CHIC1Q5VXU3 224 aa13.51□□□□□ -0.25
SART3-204ENST00000546728 SCRIBQ14160 1630 aa13.33□□□□□ -0.28
SART3-204ENST00000546728 TRIM26Q12899 539 aaPredicted RBP13.3□□□□□ -0.28
SART3-204ENST00000546728 YTHDC1Q96MU7 727 aaKnown RBP13.3□□□□□ -0.28
SART3-204ENST00000546728 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
SART3-204ENST00000546728 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
SART3-204ENST00000546728 CCER1Q8TC90 406 aaPredicted RBP13.26□□□□□ -0.29
SART3-204ENST00000546728 PABPN1Q86U42 306 aaKnown RBP eCLIP13.22□□□□□ -0.29
SART3-204ENST00000546728 TRIM41Q8WV44 630 aa13.21□□□□□ -0.29
SART3-204ENST00000546728 ZEB1P37275 1124 aaPredicted RBP13.18□□□□□ -0.3
SART3-204ENST00000546728 NACADO15069 1562 aa13.16□□□□□ -0.3
SART3-204ENST00000546728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.14□□□□□ -0.31
SART3-204ENST00000546728 CENPBP07199 599 aaPredicted RBP13.12□□□□□ -0.31
SART3-204ENST00000546728 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
SART3-204ENST00000546728 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
SART3-204ENST00000546728 SCAF1Q9H7N4 1312 aaKnown RBP13.08□□□□□ -0.31
SART3-204ENST00000546728 RANGAP1P46060 587 aaPredicted RBP13.06□□□□□ -0.32
SART3-204ENST00000546728 GTF3C3Q9Y5Q9 886 aa13.05□□□□□ -0.32
SART3-204ENST00000546728 DIEXFQ68CQ4 756 aaKnown RBP12.94□□□□□ -0.34
SART3-204ENST00000546728 CECR2Q9BXF3 1484 aa12.94□□□□□ -0.34
SART3-204ENST00000546728 NEUROD1Q13562 356 aa12.91□□□□□ -0.34
SART3-204ENST00000546728 RSF1Q96T23 1441 aaPredicted RBP12.89□□□□□ -0.35
SART3-204ENST00000546728 ACIN1Q9UKV3 1341 aaKnown RBP12.87□□□□□ -0.35
SART3-204ENST00000546728 UBTFP17480 764 aaKnown RBP12.82□□□□□ -0.36
SART3-204ENST00000546728 HNRNPUL2Q1KMD3 747 aaKnown RBP12.81□□□□□ -0.36
SART3-204ENST00000546728 MROH2BQ7Z745 1585 aa12.79□□□□□ -0.36
SART3-204ENST00000546728 APLP2Q06481 763 aa12.76□□□□□ -0.37
SART3-204ENST00000546728 MYT1Q01538 1121 aa12.74□□□□□ -0.37
SART3-204ENST00000546728 UNC13AQ9UPW8 1703 aa12.69□□□□□ -0.38
SART3-204ENST00000546728 WIZO95785 1651 aa12.67□□□□□ -0.38
SART3-204ENST00000546728 BAZ1AQ9NRL2 1556 aaPredicted RBP12.65□□□□□ -0.38
SART3-204ENST00000546728 BCANQ96GW7 911 aa12.65□□□□□ -0.38
SART3-204ENST00000546728 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
SART3-204ENST00000546728 ITGAEP38570 1179 aa12.61□□□□□ -0.39
SART3-204ENST00000546728 SMARCA4P51532 1647 aa12.56□□□□□ -0.4
SART3-204ENST00000546728 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
SART3-204ENST00000546728 MIER1Q8N108 512 aa12.52□□□□□ -0.41
SART3-204ENST00000546728 ERICH6Q7L0X2 663 aa12.49□□□□□ -0.41
SART3-204ENST00000546728 ATP1B4Q9UN42 357 aaPredicted RBP12.48□□□□□ -0.41
SART3-204ENST00000546728 BAZ1BQ9UIG0 1483 aaKnown RBP12.46□□□□□ -0.42
SART3-204ENST00000546728 CCDC88BA6NC98 1476 aa12.45□□□□□ -0.42
SART3-204ENST00000546728 NEFLP07196 543 aa12.43□□□□□ -0.42
SART3-204ENST00000546728 ATAD2BQ9ULI0 1458 aa12.43□□□□□ -0.42
SART3-204ENST00000546728 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
SART3-204ENST00000546728 CNGB1Q14028 1251 aaPredicted RBP12.42□□□□□ -0.42
SART3-204ENST00000546728 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
SART3-204ENST00000546728 SMARCA2P51531 1590 aa12.34□□□□□ -0.43
SART3-204ENST00000546728 ABCC8Q09428 1581 aa12.33□□□□□ -0.44
SART3-204ENST00000546728 FKBP8Q14318 412 aa12.26□□□□□ -0.45
SART3-204ENST00000546728 DNAJC5BQ9UF47 199 aa12.24□□□□□ -0.45
SART3-204ENST00000546728 HIRIP3Q9BW71 556 aaPredicted RBP12.23□□□□□ -0.45
SART3-204ENST00000546728 NCAPD3P42695 1498 aa12.22□□□□□ -0.45
SART3-204ENST00000546728 TRIM52Q96A61 297 aa12.21□□□□□ -0.46
SART3-204ENST00000546728 WRNQ14191 1432 aaPredicted RBP eCLIP12.2□□□□□ -0.46
SART3-204ENST00000546728 CC2D2AQ9P2K1 1620 aa12.2□□□□□ -0.46
SART3-204ENST00000546728 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
SART3-204ENST00000546728 PEG3Q9GZU2 1588 aa12.19□□□□□ -0.46
SART3-204ENST00000546728 DDX10Q13206 875 aaKnown RBP12.17□□□□□ -0.46
SART3-204ENST00000546728 POLR3GLQ9BT43 218 aa12.17□□□□□ -0.46
SART3-204ENST00000546728 IRX6P78412 446 aaPredicted RBP12.17□□□□□ -0.46
SART3-204ENST00000546728 SOGA1O94964 1423 aa12.16□□□□□ -0.46
SART3-204ENST00000546728 SUPT16HQ9Y5B9 1047 aaKnown RBP12.16□□□□□ -0.46
SART3-204ENST00000546728 FAM50AQ14320 339 aaKnown RBP12.12□□□□□ -0.47
SART3-204ENST00000546728 ANP32EQ9BTT0 268 aa12.1□□□□□ -0.47
SART3-204ENST00000546728 RUSC2Q8N2Y8 1516 aa12.1□□□□□ -0.47
SART3-204ENST00000546728 HMGXB3Q12766 1538 aa12.1□□□□□ -0.47
SART3-204ENST00000546728 BCL11AQ9H165 835 aa12.09□□□□□ -0.47
SART3-204ENST00000546728 CADPSQ9ULU8 1353 aa12.07□□□□□ -0.48
SART3-204ENST00000546728 SENP3-EIF4A1A0A087X0R7 540 aa12.06□□□□□ -0.48
SART3-204ENST00000546728 KCNH8Q96L42 1107 aa12.06□□□□□ -0.48
SART3-204ENST00000546728 NESP48681 1621 aa12.05□□□□□ -0.48
SART3-204ENST00000546728 TSHZ2Q9NRE2 1034 aa12.03□□□□□ -0.48
SART3-204ENST00000546728 ANP32CO43423 234 aa12.03□□□□□ -0.48
SART3-204ENST00000546728 SYNJ1O43426 1573 aa12.02□□□□□ -0.48
SART3-204ENST00000546728 P3H3Q8IVL6 736 aa12.01□□□□□ -0.49
SART3-204ENST00000546728 CEP162Q5TB80 1403 aa12.01□□□□□ -0.49
SART3-204ENST00000546728 NBR1Q14596 966 aa12.01□□□□□ -0.49
SART3-204ENST00000546728 CDK11AQ9UQ88 783 aaPredicted RBP12.01□□□□□ -0.49
SART3-204ENST00000546728 CFTRP13569 1480 aa12□□□□□ -0.49
SART3-204ENST00000546728 HNRNPUQ00839 825 aaKnown RBP eCLIP11.98□□□□□ -0.49
SART3-204ENST00000546728 FANCD2Q9BXW9 1451 aa11.95□□□□□ -0.5
SART3-204ENST00000546728 CUX1P39880 1505 aa11.92□□□□□ -0.5
SART3-204ENST00000546728 RTL5Q5HYW3 569 aaPredicted RBP11.91□□□□□ -0.5
SART3-204ENST00000546728 SIN3AQ96ST3 1273 aa11.91□□□□□ -0.5
SART3-204ENST00000546728 RBM19Q9Y4C8 960 aaKnown RBP11.91□□□□□ -0.5
SART3-204ENST00000546728 EEA1Q15075 1411 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms