RNA–Protein interactions for RNA: ENST00000545616.2

RNF24-204, Transcript of ring finger protein 24, humanhuman

TSL 1 (best) BASIC

Gene RNF24, Length 1,128 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF24-204ENST00000545616 SF3B1O75533 1304 aaKnown RBP eCLIP17.74■□□□□ 0.432e-6■■■■■ 94.2
RNF24-204ENST00000545616 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.01■□□□□ 0.312e-6■■■■■ 79.6
RNF24-204ENST00000545616 SMNDC1O75940 238 aaKnown RBP eCLIP14.56□□□□□ -0.081e-10■■■■■ 54.5
RNF24-204ENST00000545616 MATR3P43243 847 aaKnown RBP eCLIP17.59■□□□□ 0.415e-7■■■■■ 49.6
RNF24-204ENST00000545616 SF3A3Q12874 501 aaKnown RBP eCLIP13.66□□□□□ -0.229e-7■■■■■ 44.5
RNF24-204ENST00000545616 DDX3XO00571 662 aaKnown RBP eCLIP16.09■□□□□ 0.171e-10■■■■■ 42.7
RNF24-204ENST00000545616 RBM22Q9NW64 420 aaKnown RBP eCLIP15.99■□□□□ 0.154e-9■■■■■ 38.9
RNF24-204ENST00000545616 LSM11P83369 360 aaKnown RBP eCLIP14.02□□□□□ -0.177e-8■■■■■ 38.8
RNF24-204ENST00000545616 GTF2F1P35269 517 aaKnown RBP eCLIP18.17■□□□□ 0.54e-9■■■■■ 37.4
RNF24-204ENST00000545616 EIF4G2P78344 907 aaKnown RBP eCLIP22.15■■□□□ 1.147e-8■■■■■ 36.5
RNF24-204ENST00000545616 HNRNPLP14866 589 aaKnown RBP eCLIP16.96■□□□□ 0.314e-9■■■■■ 34.7
RNF24-204ENST00000545616 QKIQ96PU8 341 aaKnown RBP eCLIP15.72■□□□□ 0.118e-6■■■■■ 32.9
RNF24-204ENST00000545616 RBM15Q96T37 977 aaKnown RBP eCLIP16.13■□□□□ 0.175e-9■■■■■ 32.2
RNF24-204ENST00000545616 GPKOWQ92917 476 aaPredicted RBP eCLIP18.55■□□□□ 0.565e-7■■■■■ 31.2
RNF24-204ENST00000545616 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.72□□□□□ -0.371e-7■■■■■ 28.3
RNF24-204ENST00000545616 TARDBPQ13148 414 aaKnown RBP eCLIP16.42■□□□□ 0.221e-6■■■■■ 27.5
RNF24-204ENST00000545616 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.87■□□□□ 0.615e-8■■■■□ 26.2
RNF24-204ENST00000545616 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.51■□□□□ 0.712e-7■■■■□ 23.4
RNF24-204ENST00000545616 HNRNPMP52272 730 aaKnown RBP eCLIP25.79■■□□□ 1.725e-6■■■■□ 22.3
RNF24-204ENST00000545616 AQRO60306 1485 aaKnown RBP eCLIP29.11■■■□□ 2.251e-6■■■■□ 21.2
RNF24-204ENST00000545616 EFTUD2Q15029 972 aaKnown RBP eCLIP14.95□□□□□ -0.025e-8■■■■□ 20.6
RNF24-204ENST00000545616 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.78■■□□□ 1.244e-6■■■■□ 20.3
RNF24-204ENST00000545616 SF3B4Q15427 424 aaKnown RBP eCLIP14.73□□□□□ -0.056e-7■■■□□ 17.2
RNF24-204ENST00000545616 U2AF2P26368 475 aaKnown RBP eCLIP17.65■□□□□ 0.421e-7■■■□□ 17.2
RNF24-204ENST00000545616 KHSRPQ92945 711 aaKnown RBP eCLIP18.23■□□□□ 0.512e-7■■■□□ 17.1
RNF24-204ENST00000545616 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.27■□□□□ 0.043e-10■■■□□ 16.8
RNF24-204ENST00000545616 U2AF1Q01081 240 aaKnown RBP eCLIP21.48■■□□□ 1.037e-8■■■□□ 15
RNF24-204ENST00000545616 AARSP49588 968 aaKnown RBP eCLIP17.42■□□□□ 0.381e-5■■□□□ 14
RNF24-204ENST00000545616 NONOQ15233 471 aaKnown RBP eCLIP18.07■□□□□ 0.481e-6■■□□□ 14
RNF24-204ENST00000545616 AGGF1Q8N302 714 aaeCLIP15.16■□□□□ 0.021e-6■■□□□ 13.6
RNF24-204ENST00000545616 PTBP1P26599 531 aaKnown RBP eCLIP12.02□□□□□ -0.494e-7■■□□□ 12.9
RNF24-204ENST00000545616 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.43■■□□□ 1.829e-8■■□□□ 12.9
RNF24-204ENST00000545616 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.46□□□□□ -0.091e-7■■□□□ 12.3
RNF24-204ENST00000545616 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.76□□□□□ -0.213e-7■■□□□ 11.4
RNF24-204ENST00000545616 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.11■■□□□ 1.611e-8■□□□□ 10.9
RNF24-204ENST00000545616 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.08□□□□□ -0.325e-7■□□□□ 9.4
RNF24-204ENST00000545616 SND1Q7KZF4 910 aaKnown RBP eCLIP16.59■□□□□ 0.253e-6■□□□□ 9.1
RNF24-204ENST00000545616 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.69■□□□□ 0.262e-7■□□□□ 8.6
Retrieved 38 of 38 RNA–protein pairs in 10.1 ms