RNA–Protein interactions for RNA: ENST00000545561.1

HPS5-210, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 2

Gene HPS5, Length 1,121 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-210ENST00000545561 AEBP2Q6ZN18 517 aaPredicted RBP26.34■■□□□ 1.81
HPS5-210ENST00000545561 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
HPS5-210ENST00000545561 SENP3Q9H4L4 574 aaPredicted RBP22.43■■□□□ 1.18
HPS5-210ENST00000545561 PHF23Q9BUL5 403 aaPredicted RBP22.34■■□□□ 1.17
HPS5-210ENST00000545561 FOXD1Q16676 465 aa20.83■□□□□ 0.93
HPS5-210ENST00000545561 PLPPR3Q6T4P5 718 aa20.54■□□□□ 0.88
HPS5-210ENST00000545561 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
HPS5-210ENST00000545561 ADRA2BP18089 450 aa19.77■□□□□ 0.76
HPS5-210ENST00000545561 PIAS4Q8N2W9 510 aaPredicted RBP19.57■□□□□ 0.72
HPS5-210ENST00000545561 MSH5O43196 834 aa19.35■□□□□ 0.69
HPS5-210ENST00000545561 POTEDQ86YR6 584 aa18.13■□□□□ 0.49
HPS5-210ENST00000545561 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
HPS5-210ENST00000545561 PPP4R3CPQ6ZMV5 832 aa18.04■□□□□ 0.48
HPS5-210ENST00000545561 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
HPS5-210ENST00000545561 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
HPS5-210ENST00000545561 CNKSR2Q8WXI2 1034 aa17.63■□□□□ 0.41
HPS5-210ENST00000545561 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
HPS5-210ENST00000545561 HOXD11P31277 338 aaPredicted RBP17.37■□□□□ 0.37
HPS5-210ENST00000545561 RNF216Q9NWF9 866 aaPredicted RBP17.36■□□□□ 0.37
HPS5-210ENST00000545561 KCNA4P22459 653 aa17.27■□□□□ 0.36
HPS5-210ENST00000545561 NPM3O75607 178 aaKnown RBP17.23■□□□□ 0.35
HPS5-210ENST00000545561 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
HPS5-210ENST00000545561 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
HPS5-210ENST00000545561 RNF39Q9H2S5 420 aa16.55■□□□□ 0.24
HPS5-210ENST00000545561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.24
HPS5-210ENST00000545561 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
HPS5-210ENST00000545561 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
HPS5-210ENST00000545561 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
HPS5-210ENST00000545561 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
HPS5-210ENST00000545561 U3KPZ7 1027 aaPredicted RBP16.23■□□□□ 0.19
HPS5-210ENST00000545561 FOXD4L1Q9NU39 408 aa15.99■□□□□ 0.15
HPS5-210ENST00000545561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
HPS5-210ENST00000545561 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
HPS5-210ENST00000545561 MYCNP04198 464 aaPredicted RBP15.94■□□□□ 0.14
HPS5-210ENST00000545561 ZBTB22O15209 634 aa15.88■□□□□ 0.13
HPS5-210ENST00000545561 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
HPS5-210ENST00000545561 APLP2Q06481 763 aa15.86■□□□□ 0.13
HPS5-210ENST00000545561 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
HPS5-210ENST00000545561 CAPN15O75808 1086 aa15.81■□□□□ 0.12
HPS5-210ENST00000545561 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
HPS5-210ENST00000545561 TRHP20396 242 aaPredicted RBP15.67■□□□□ 0.1
HPS5-210ENST00000545561 DSG3P32926 999 aa15.64■□□□□ 0.09
HPS5-210ENST00000545561 EHMT2Q96KQ7 1210 aa15.56■□□□□ 0.08
HPS5-210ENST00000545561 CSRNP3Q8WYN3 585 aa15.55■□□□□ 0.08
HPS5-210ENST00000545561 ATF5Q9Y2D1 282 aaPredicted RBP15.51■□□□□ 0.07
HPS5-210ENST00000545561 ATXN8OSP0DMR3 200 aa15.49■□□□□ 0.07
HPS5-210ENST00000545561 ABCB7O75027 752 aa15.47■□□□□ 0.07
HPS5-210ENST00000545561 POLA2Q14181 598 aa15.36■□□□□ 0.05
HPS5-210ENST00000545561 ZBTB12Q9Y330 459 aaPredicted RBP15.1■□□□□ 0.01
HPS5-210ENST00000545561 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
HPS5-210ENST00000545561 FBLN2P98095 1184 aa14.9□□□□□ -0.02
HPS5-210ENST00000545561 MKRN4PQ13434 485 aaPredicted RBP14.83□□□□□ -0.04
HPS5-210ENST00000545561 OSCARQ8IYS5 282 aa14.83□□□□□ -0.04
HPS5-210ENST00000545561 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
HPS5-210ENST00000545561 SPDYE2BA6NHP3 402 aa14.66□□□□□ -0.06
HPS5-210ENST00000545561 SPDYE6P0CI01 402 aa14.66□□□□□ -0.06
HPS5-210ENST00000545561 SPDYE2Q495Y8 402 aa14.66□□□□□ -0.06
HPS5-210ENST00000545561 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
HPS5-210ENST00000545561 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
HPS5-210ENST00000545561 SSUH2Q9Y2M2 353 aa14.51□□□□□ -0.09
HPS5-210ENST00000545561 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
HPS5-210ENST00000545561 SPDYE4A6NLX3 237 aa14.36□□□□□ -0.11
HPS5-210ENST00000545561 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
HPS5-210ENST00000545561 PABPN1Q86U42 306 aaKnown RBP eCLIP14.34□□□□□ -0.11
HPS5-210ENST00000545561 POTEHQ6S545 545 aa14.31□□□□□ -0.12
HPS5-210ENST00000545561 SPDYE1Q8NFV5 336 aaPredicted RBP14.3□□□□□ -0.12
HPS5-210ENST00000545561 CLEC11AQ9Y240 323 aa14.23□□□□□ -0.13
HPS5-210ENST00000545561 FXR2P51116 673 aaKnown RBP eCLIP14.16□□□□□ -0.14
HPS5-210ENST00000545561 PIP4P2Q8N4L2 257 aa14.16□□□□□ -0.14
HPS5-210ENST00000545561 PROM2Q8N271 834 aa14.09□□□□□ -0.15
HPS5-210ENST00000545561 PRR29P0C7W0 189 aa14.08□□□□□ -0.16
HPS5-210ENST00000545561 FKBP8Q14318 412 aa14.07□□□□□ -0.16
HPS5-210ENST00000545561 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
HPS5-210ENST00000545561 PRKAR2AP13861 404 aaKnown RBP13.99□□□□□ -0.17
HPS5-210ENST00000545561 CHADLQ6NUI6 762 aa13.9□□□□□ -0.18
HPS5-210ENST00000545561 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
HPS5-210ENST00000545561 HAX1O00165 279 aa13.79□□□□□ -0.2
HPS5-210ENST00000545561 FARP1Q9Y4F1 1045 aaPredicted RBP13.77□□□□□ -0.21
HPS5-210ENST00000545561 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
HPS5-210ENST00000545561 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
HPS5-210ENST00000545561 MIER1Q8N108 512 aa13.66□□□□□ -0.22
HPS5-210ENST00000545561 MNX1P50219 401 aaPredicted RBP13.65□□□□□ -0.22
HPS5-210ENST00000545561 EVX2Q03828 476 aa13.63□□□□□ -0.23
HPS5-210ENST00000545561 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
HPS5-210ENST00000545561 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
HPS5-210ENST00000545561 NPM1P06748 294 aaKnown RBP eCLIP13.6□□□□□ -0.23
HPS5-210ENST00000545561 PLCD3Q8N3E9 789 aa13.59□□□□□ -0.23
HPS5-210ENST00000545561 CD44P16070 742 aaKnown RBP13.57□□□□□ -0.24
HPS5-210ENST00000545561 VASPP50552 380 aaPredicted RBP13.49□□□□□ -0.25
HPS5-210ENST00000545561 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
HPS5-210ENST00000545561 PAK3O75914 559 aaPredicted RBP13.44□□□□□ -0.26
HPS5-210ENST00000545561 ZRANB1Q9UGI0 708 aa13.44□□□□□ -0.26
HPS5-210ENST00000545561 ZNF579Q8NAF0 562 aaKnown RBP13.38□□□□□ -0.27
HPS5-210ENST00000545561 GABBR2O75899 941 aa13.37□□□□□ -0.27
HPS5-210ENST00000545561 CLCN6P51797 869 aa13.36□□□□□ -0.27
HPS5-210ENST00000545561 RASEFQ8IZ41 740 aa13.34□□□□□ -0.27
HPS5-210ENST00000545561 TSPYL2Q9H2G4 693 aaPredicted RBP13.34□□□□□ -0.27
HPS5-210ENST00000545561 NUBP1P53384 320 aa13.33□□□□□ -0.28
HPS5-210ENST00000545561 KLHL34Q8N239 644 aa13.32□□□□□ -0.28
HPS5-210ENST00000545561 IFNLR1Q8IU57 520 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms