RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-222ENST00000545015 NISCHQ9Y2I1 1504 aa33.12■■■□□ 2.89
POLE-222ENST00000545015 CCDC180Q9P1Z9 1646 aa29.54■■■□□ 2.32
POLE-222ENST00000545015 ABCC9O60706 1549 aa29.05■■■□□ 2.24
POLE-222ENST00000545015 RB1CC1Q8TDY2 1594 aa27.91■■■□□ 2.06
POLE-222ENST00000545015 NACADO15069 1562 aa27.86■■■□□ 2.05
POLE-222ENST00000545015 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
POLE-222ENST00000545015 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
POLE-222ENST00000545015 ZCCHC6Q5VYS8 1495 aaKnown RBP27.54■■■□□ 2
POLE-222ENST00000545015 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
POLE-222ENST00000545015 UNC13AQ9UPW8 1703 aa27.19■■□□□ 1.94
POLE-222ENST00000545015 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.93
POLE-222ENST00000545015 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
POLE-222ENST00000545015 DNAJC5BQ9UF47 199 aa26.94■■□□□ 1.9
POLE-222ENST00000545015 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
POLE-222ENST00000545015 SCRIBQ14160 1630 aa26.83■■□□□ 1.89
POLE-222ENST00000545015 EIF4G1Q04637 1599 aaKnown RBP26.37■■□□□ 1.81
POLE-222ENST00000545015 CC2D2AQ9P2K1 1620 aa26.3■■□□□ 1.8
POLE-222ENST00000545015 CECR2Q9BXF3 1484 aa26.18■■□□□ 1.78
POLE-222ENST00000545015 NCAPD3P42695 1498 aa25.73■■□□□ 1.71
POLE-222ENST00000545015 SMARCA4P51532 1647 aa25.71■■□□□ 1.71
POLE-222ENST00000545015 BAZ1AQ9NRL2 1556 aaPredicted RBP25.68■■□□□ 1.7
POLE-222ENST00000545015 ATAD2BQ9ULI0 1458 aa25.67■■□□□ 1.7
POLE-222ENST00000545015 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
POLE-222ENST00000545015 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
POLE-222ENST00000545015 PEG3Q9GZU2 1588 aa25.55■■□□□ 1.68
POLE-222ENST00000545015 MROH2BQ7Z745 1585 aa25.48■■□□□ 1.67
POLE-222ENST00000545015 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
POLE-222ENST00000545015 WIZO95785 1651 aa25.14■■□□□ 1.62
POLE-222ENST00000545015 RSF1Q96T23 1441 aaPredicted RBP25.13■■□□□ 1.61
POLE-222ENST00000545015 NESP48681 1621 aa25.08■■□□□ 1.61
POLE-222ENST00000545015 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
POLE-222ENST00000545015 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
POLE-222ENST00000545015 CUX2O14529 1486 aa24.99■■□□□ 1.59
POLE-222ENST00000545015 CADPSQ9ULU8 1353 aa24.94■■□□□ 1.58
POLE-222ENST00000545015 TOP2AP11388 1531 aaKnown RBP24.93■■□□□ 1.58
POLE-222ENST00000545015 PDS5BQ9NTI5 1447 aa24.89■■□□□ 1.58
POLE-222ENST00000545015 THOC2Q8NI27 1593 aaKnown RBP24.8■■□□□ 1.56
POLE-222ENST00000545015 CFTRP13569 1480 aa24.76■■□□□ 1.55
POLE-222ENST00000545015 KIF21AQ7Z4S6 1674 aa24.75■■□□□ 1.55
POLE-222ENST00000545015 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.53
POLE-222ENST00000545015 CCDC88BA6NC98 1476 aa24.63■■□□□ 1.53
POLE-222ENST00000545015 FANCD2Q9BXW9 1451 aa24.62■■□□□ 1.53
POLE-222ENST00000545015 CEP164Q9UPV0 1460 aa24.61■■□□□ 1.53
POLE-222ENST00000545015 WDR62O43379 1518 aa24.58■■□□□ 1.53
POLE-222ENST00000545015 DNAJC5Q9H3Z4 198 aa24.49■■□□□ 1.51
POLE-222ENST00000545015 PRDM2Q13029 1718 aa24.44■■□□□ 1.5
POLE-222ENST00000545015 URB2Q14146 1524 aaKnown RBP24.39■■□□□ 1.49
POLE-222ENST00000545015 ABCC8Q09428 1581 aa24.24■■□□□ 1.47
POLE-222ENST00000545015 TOPBP1Q92547 1522 aa24.2■■□□□ 1.47
POLE-222ENST00000545015 SUPT5HO00267 1087 aaKnown RBP24.17■■□□□ 1.46
POLE-222ENST00000545015 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
POLE-222ENST00000545015 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
POLE-222ENST00000545015 ZNF608Q9ULD9 1512 aaPredicted RBP24■■□□□ 1.43
POLE-222ENST00000545015 POLA1P09884 1462 aaPredicted RBP23.99■■□□□ 1.43
POLE-222ENST00000545015 TARBP1Q13395 1621 aaKnown RBP23.96■■□□□ 1.43
POLE-222ENST00000545015 CUX1P39880 1505 aa23.92■■□□□ 1.42
POLE-222ENST00000545015 EIF4G3O43432 1585 aaKnown RBP23.88■■□□□ 1.41
POLE-222ENST00000545015 SOGA1O94964 1423 aa23.87■■□□□ 1.41
POLE-222ENST00000545015 OSCARQ8IYS5 282 aa23.87■■□□□ 1.41
POLE-222ENST00000545015 FGD5Q6ZNL6 1462 aa23.87■■□□□ 1.41
POLE-222ENST00000545015 RAD54L2Q9Y4B4 1467 aa23.84■■□□□ 1.41
POLE-222ENST00000545015 AQRO60306 1485 aaKnown RBP eCLIP23.83■■□□□ 1.41
POLE-222ENST00000545015 WDR97A6NE52 1622 aa23.82■■□□□ 1.4
POLE-222ENST00000545015 TDRD9Q8NDG6 1382 aaKnown RBP23.74■■□□□ 1.39
POLE-222ENST00000545015 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
POLE-222ENST00000545015 ABCA10Q8WWZ4 1543 aa23.68■■□□□ 1.38
POLE-222ENST00000545015 TOP2BQ02880 1626 aa23.66■■□□□ 1.38
POLE-222ENST00000545015 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
POLE-222ENST00000545015 GRIN2BQ13224 1484 aa23.64■■□□□ 1.38
POLE-222ENST00000545015 MAGI1Q96QZ7 1491 aaPredicted RBP23.62■■□□□ 1.37
POLE-222ENST00000545015 SNAPC4Q5SXM2 1469 aa23.61■■□□□ 1.37
POLE-222ENST00000545015 SYNJ1O43426 1573 aa23.61■■□□□ 1.37
POLE-222ENST00000545015 GAPVD1Q14C86 1478 aa23.59■■□□□ 1.37
POLE-222ENST00000545015 CHD1O14646 1710 aa23.58■■□□□ 1.37
POLE-222ENST00000545015 ABCA5Q8WWZ7 1642 aa23.57■■□□□ 1.36
POLE-222ENST00000545015 SYNJ2O15056 1496 aa23.52■■□□□ 1.36
POLE-222ENST00000545015 FBLN2P98095 1184 aa23.52■■□□□ 1.36
POLE-222ENST00000545015 PBRM1Q86U86 1689 aa23.49■■□□□ 1.35
POLE-222ENST00000545015 CHMP7Q8WUX9 453 aaPredicted RBP23.49■■□□□ 1.35
POLE-222ENST00000545015 ARHGEF11O15085 1522 aa23.48■■□□□ 1.35
POLE-222ENST00000545015 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
POLE-222ENST00000545015 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
POLE-222ENST00000545015 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
POLE-222ENST00000545015 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
POLE-222ENST00000545015 CLASP1Q7Z460 1538 aa23.42■■□□□ 1.34
POLE-222ENST00000545015 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
POLE-222ENST00000545015 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
POLE-222ENST00000545015 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
POLE-222ENST00000545015 GRIN2AQ12879 1464 aa23.32■■□□□ 1.32
POLE-222ENST00000545015 NUP160Q12769 1436 aa23.28■■□□□ 1.32
POLE-222ENST00000545015 ARAP1Q96P48 1450 aa23.27■■□□□ 1.32
POLE-222ENST00000545015 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
POLE-222ENST00000545015 KIF27Q86VH2 1401 aa23.21■■□□□ 1.31
POLE-222ENST00000545015 CEP170Q5SW79 1584 aa23.19■■□□□ 1.3
POLE-222ENST00000545015 IGF1RP08069 1367 aa23.17■■□□□ 1.3
POLE-222ENST00000545015 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
POLE-222ENST00000545015 CUL7Q14999 1698 aa23.08■■□□□ 1.29
POLE-222ENST00000545015 RUSC2Q8N2Y8 1516 aa23.02■■□□□ 1.28
POLE-222ENST00000545015 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
POLE-222ENST00000545015 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms