RNA–Protein interactions for RNA: ENST00000544823.5

QKI-215, Transcript of QKI, KH domain containing RNA binding, humanhuman

TSL 2

Gene QKI, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
QKI-215ENST00000544823 SF3B1O75533 1304 aaKnown RBP eCLIP2.45□□□□□ -2.022e-11■■■■■ 137.9
QKI-215ENST00000544823 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.97□□□□□ -1.133e-7■■■■■ 77.2
QKI-215ENST00000544823 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.25□□□□□ -2.054e-6■■■■■ 48.1
QKI-215ENST00000544823 ZRANB2O95218 330 aaKnown RBP eCLIP4.71□□□□□ -1.661e-7■■■■■ 39.6
QKI-215ENST00000544823 TARDBPQ13148 414 aaKnown RBP eCLIP4.96□□□□□ -1.628e-8■■■■■ 37.6
QKI-215ENST00000544823 TRA2AQ13595 282 aaKnown RBP eCLIP2.83□□□□□ -1.967e-7■■■■■ 31.8
QKI-215ENST00000544823 RBM22Q9NW64 420 aaKnown RBP eCLIP2.14□□□□□ -2.071e-7■■■■■ 31.6
QKI-215ENST00000544823 ILF3Q12906 894 aaKnown RBP eCLIP3.77□□□□□ -1.815e-9■■■■■ 30.6
QKI-215ENST00000544823 PTBP1P26599 531 aaKnown RBP eCLIP2.45□□□□□ -2.022e-10■■■■■ 30.2
QKI-215ENST00000544823 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.03□□□□□ -1.441e-9■■■■■ 30.2
QKI-215ENST00000544823 HNRNPMP52272 730 aaKnown RBP eCLIP4.94□□□□□ -1.622e-7■■■■■ 29.8
QKI-215ENST00000544823 U2AF2P26368 475 aaKnown RBP eCLIP2.81□□□□□ -1.963e-8■■■■■ 27.1
QKI-215ENST00000544823 SF3B4Q15427 424 aaKnown RBP eCLIP3.93□□□□□ -1.785e-6■■■■□ 26.7
QKI-215ENST00000544823 AQRO60306 1485 aaKnown RBP eCLIP2.95□□□□□ -1.946e-9■■■■□ 25.1
QKI-215ENST00000544823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.15□□□□□ -0.463e-9■■■■□ 24.7
QKI-215ENST00000544823 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.25□□□□□ -1.894e-7■■■■□ 23.4
QKI-215ENST00000544823 QKIQ96PU8 341 aaKnown RBP eCLIP2.22□□□□□ -2.055e-8■■■■□ 23.2
QKI-215ENST00000544823 SAFB2Q14151 953 aaKnown RBP eCLIP5.62□□□□□ -1.517e-7■■■■□ 22.6
QKI-215ENST00000544823 U2AF1Q01081 240 aaKnown RBP eCLIP4.34□□□□□ -1.717e-6■■■■□ 20
QKI-215ENST00000544823 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.21□□□□□ -1.424e-19■■■□□ 18.6
QKI-215ENST00000544823 LARP4Q71RC2 724 aaKnown RBP eCLIP5.77□□□□□ -1.492e-6■■■□□ 17.7
QKI-215ENST00000544823 WDR43Q15061 677 aaKnown RBP eCLIP2.76□□□□□ -1.974e-6■■■□□ 15.1
QKI-215ENST00000544823 GPKOWQ92917 476 aaPredicted RBP eCLIP9.1□□□□□ -0.952e-11■■□□□ 14.1
QKI-215ENST00000544823 HNRNPLP14866 589 aaKnown RBP eCLIP5.55□□□□□ -1.528e-8■■□□□ 13.8
QKI-215ENST00000544823 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.54□□□□□ -2.166e-8■■□□□ 13.7
QKI-215ENST00000544823 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.63□□□□□ -1.834e-6■■□□□ 13.4
QKI-215ENST00000544823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.79■□□□□ 0.285e-9■■□□□ 13.4
QKI-215ENST00000544823 MATR3P43243 847 aaKnown RBP eCLIP3.24□□□□□ -1.898e-7■■□□□ 13.2
QKI-215ENST00000544823 PCBP2Q15366 365 aaKnown RBP eCLIP4.84□□□□□ -1.634e-9■■□□□ 13.1
QKI-215ENST00000544823 KHSRPQ92945 711 aaKnown RBP eCLIP11.61□□□□□ -0.551e-6■□□□□ 10.7
QKI-215ENST00000544823 PPIGQ13427 754 aaKnown RBP eCLIP3.49□□□□□ -1.855e-14■□□□□ 10.3
QKI-215ENST00000544823 ZNF622Q969S3 477 aaKnown RBP eCLIP3.21□□□□□ -1.96e-17■□□□□ 9.5
QKI-215ENST00000544823 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.13□□□□□ -1.912e-7■□□□□ 8.9
QKI-215ENST00000544823 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.68□□□□□ -1.665e-11■□□□□ 8.8
QKI-215ENST00000544823 AGGF1Q8N302 714 aaeCLIP7.78□□□□□ -1.163e-6■□□□□ 8.8
QKI-215ENST00000544823 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.96□□□□□ -0.986e-9■□□□□ 8.5
QKI-215ENST00000544823 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.19□□□□□ -1.744e-6■□□□□ 8.4
QKI-215ENST00000544823 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.05□□□□□ -1.441e-6■□□□□ 8.2
QKI-215ENST00000544823 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.12□□□□□ -1.757e-12■□□□□ 8
Retrieved 39 of 39 RNA–protein pairs in 8.4 ms