RNA–Protein interactions for RNA: ENST00000544414.1

POLE-219, Transcript of DNA polymerase epsilon, catalytic subunit, humanhuman

TSL 2

Gene POLE, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLE-219ENST00000544414 NISCHQ9Y2I1 1504 aa46.73■■■■■ 5.07
POLE-219ENST00000544414 CCDC180Q9P1Z9 1646 aa41.59■■■■■ 4.25
POLE-219ENST00000544414 ABCC9O60706 1549 aa40.84■■■■■ 4.13
POLE-219ENST00000544414 RB1CC1Q8TDY2 1594 aa39.23■■■■□ 3.87
POLE-219ENST00000544414 NACADO15069 1562 aa39.16■■■■□ 3.86
POLE-219ENST00000544414 DCAF8L2P0C7V8 631 aa39.14■■■■□ 3.86
POLE-219ENST00000544414 MYO15BQ96JP2 1530 aa38.89■■■■□ 3.82
POLE-219ENST00000544414 ZCCHC6Q5VYS8 1495 aaKnown RBP38.88■■■■□ 3.81
POLE-219ENST00000544414 DCAF1Q9Y4B6 1507 aa38.66■■■■□ 3.78
POLE-219ENST00000544414 UNC13AQ9UPW8 1703 aa38.33■■■■□ 3.73
POLE-219ENST00000544414 PABPN1Q86U42 306 aaKnown RBP eCLIP38.16■■■■□ 3.78e-11■■■■■ 38.9
POLE-219ENST00000544414 BICRAQ9NZM4 1560 aa38.04■■■■□ 3.68
POLE-219ENST00000544414 SCRIBQ14160 1630 aa37.93■■■■□ 3.66
POLE-219ENST00000544414 DNAJC5BQ9UF47 199 aa37.64■■■■□ 3.62
POLE-219ENST00000544414 SHROOM4Q9ULL8 1493 aa37.64■■■■□ 3.62
POLE-219ENST00000544414 EIF4G1Q04637 1599 aaKnown RBP37.05■■■■□ 3.52
POLE-219ENST00000544414 CC2D2AQ9P2K1 1620 aa36.94■■■■□ 3.5
POLE-219ENST00000544414 CECR2Q9BXF3 1484 aa36.72■■■■□ 3.47
POLE-219ENST00000544414 SMARCA4P51532 1647 aa36.28■■■■□ 3.4
POLE-219ENST00000544414 BAZ1AQ9NRL2 1556 aaPredicted RBP36.23■■■■□ 3.39
POLE-219ENST00000544414 NCAPD3P42695 1498 aa36.14■■■■□ 3.38
POLE-219ENST00000544414 ATAD2BQ9ULI0 1458 aa36.13■■■■□ 3.37
POLE-219ENST00000544414 SMARCA2P51531 1590 aa36.08■■■■□ 3.37
POLE-219ENST00000544414 MROH2BQ7Z745 1585 aa36.01■■■■□ 3.35
POLE-219ENST00000544414 PEG3Q9GZU2 1588 aa35.93■■■■□ 3.34
POLE-219ENST00000544414 HMGXB3Q12766 1538 aa35.93■■■■□ 3.34
POLE-219ENST00000544414 BAZ1BQ9UIG0 1483 aaKnown RBP35.82■■■■□ 3.32
POLE-219ENST00000544414 WIZO95785 1651 aa35.61■■■■□ 3.29
POLE-219ENST00000544414 RSF1Q96T23 1441 aaPredicted RBP35.56■■■■□ 3.28
POLE-219ENST00000544414 NESP48681 1621 aa35.3■■■■□ 3.24
POLE-219ENST00000544414 TOP2AP11388 1531 aaKnown RBP35.22■■■■□ 3.23
POLE-219ENST00000544414 ERCC6Q03468 1493 aa35.22■■■■□ 3.23
POLE-219ENST00000544414 LAMC3Q9Y6N6 1575 aa35.2■■■■□ 3.23
POLE-219ENST00000544414 CADPSQ9ULU8 1353 aa35.09■■■■□ 3.21
POLE-219ENST00000544414 PDS5BQ9NTI5 1447 aa34.98■■■■□ 3.19
POLE-219ENST00000544414 CUX2O14529 1486 aa34.9■■■■□ 3.18
POLE-219ENST00000544414 KIF21AQ7Z4S6 1674 aa34.86■■■■□ 3.17
POLE-219ENST00000544414 CFTRP13569 1480 aa34.84■■■■□ 3.17
POLE-219ENST00000544414 CCDC88BA6NC98 1476 aa34.83■■■■□ 3.17
POLE-219ENST00000544414 THOC2Q8NI27 1593 aaKnown RBP34.78■■■■□ 3.16
POLE-219ENST00000544414 FANCD2Q9BXW9 1451 aa34.67■■■■□ 3.14
POLE-219ENST00000544414 CEP164Q9UPV0 1460 aa34.64■■■■□ 3.14
POLE-219ENST00000544414 MRC2Q9UBG0 1479 aa34.61■■■■□ 3.13
POLE-219ENST00000544414 SUPT5HO00267 1087 aaKnown RBP34.58■■■■□ 3.13
POLE-219ENST00000544414 PRDM2Q13029 1718 aa34.55■■■■□ 3.12
POLE-219ENST00000544414 WDR62O43379 1518 aa34.5■■■■□ 3.11
POLE-219ENST00000544414 URB2Q14146 1524 aaKnown RBP34.33■■■■□ 3.09
POLE-219ENST00000544414 ABCC8Q09428 1581 aa34.11■■■■□ 3.05
POLE-219ENST00000544414 TOPBP1Q92547 1522 aa34.1■■■■□ 3.05
POLE-219ENST00000544414 DNMBPQ6XZF7 1577 aa34.04■■■■□ 3.04
POLE-219ENST00000544414 DNAJC5Q9H3Z4 198 aa34.02■■■■□ 3.04
POLE-219ENST00000544414 IFT140Q96RY7 1462 aa33.92■■■■□ 3.02
POLE-219ENST00000544414 POLA1P09884 1462 aaPredicted RBP33.8■■■■□ 3
POLE-219ENST00000544414 CUX1P39880 1505 aa33.79■■■■□ 3
POLE-219ENST00000544414 ZNF608Q9ULD9 1512 aaPredicted RBP33.77■■■■□ 3
POLE-219ENST00000544414 TARBP1Q13395 1621 aaKnown RBP33.73■■■□□ 2.99
POLE-219ENST00000544414 FGD5Q6ZNL6 1462 aa33.69■■■□□ 2.98
POLE-219ENST00000544414 SOGA1O94964 1423 aa33.68■■■□□ 2.98
POLE-219ENST00000544414 RAD54L2Q9Y4B4 1467 aa33.66■■■□□ 2.98
POLE-219ENST00000544414 EIF4G3O43432 1585 aaKnown RBP33.62■■■□□ 2.97
POLE-219ENST00000544414 AQRO60306 1485 aaKnown RBP eCLIP33.58■■■□□ 2.975e-7■■■■■ 27.4
POLE-219ENST00000544414 WRNQ14191 1432 aaPredicted RBP eCLIP33.53■■■□□ 2.96
POLE-219ENST00000544414 TDRD9Q8NDG6 1382 aaKnown RBP33.5■■■□□ 2.95
POLE-219ENST00000544414 OSCARQ8IYS5 282 aa33.47■■■□□ 2.95
POLE-219ENST00000544414 WDR97A6NE52 1622 aa33.46■■■□□ 2.95
POLE-219ENST00000544414 TOP2BQ02880 1626 aa33.46■■■□□ 2.95
POLE-219ENST00000544414 BIVM-ERCC5R4GMW8 1640 aa33.45■■■□□ 2.95
POLE-219ENST00000544414 SYNJ1O43426 1573 aa33.43■■■□□ 2.94
POLE-219ENST00000544414 ABCA10Q8WWZ4 1543 aa33.37■■■□□ 2.93
POLE-219ENST00000544414 GRIN2BQ13224 1484 aa33.29■■■□□ 2.92
POLE-219ENST00000544414 GAPVD1Q14C86 1478 aa33.28■■■□□ 2.92
POLE-219ENST00000544414 SNAPC4Q5SXM2 1469 aa33.25■■■□□ 2.91
POLE-219ENST00000544414 CHD1O14646 1710 aa33.23■■■□□ 2.91
POLE-219ENST00000544414 FBLN2P98095 1184 aa33.23■■■□□ 2.91
POLE-219ENST00000544414 ABCA5Q8WWZ7 1642 aa33.23■■■□□ 2.91
POLE-219ENST00000544414 MAGI1Q96QZ7 1491 aaPredicted RBP33.22■■■□□ 2.91
POLE-219ENST00000544414 PBRM1Q86U86 1689 aa33.19■■■□□ 2.9
POLE-219ENST00000544414 CHMP7Q8WUX9 453 aaPredicted RBP33.12■■■□□ 2.89
POLE-219ENST00000544414 SYNJ2O15056 1496 aa33.09■■■□□ 2.89
POLE-219ENST00000544414 ERICH3Q5RHP9 1530 aa32.97■■■□□ 2.87
POLE-219ENST00000544414 ADAMTS12P58397 1594 aa32.92■■■□□ 2.86
POLE-219ENST00000544414 RIMBP3CA6NJZ7 1639 aa32.9■■■□□ 2.86
POLE-219ENST00000544414 RIMBP3BA6NNM3 1639 aa32.9■■■□□ 2.86
POLE-219ENST00000544414 RIMBP3Q9UFD9 1639 aa32.9■■■□□ 2.86
POLE-219ENST00000544414 FHAD1B1AJZ9 1412 aa32.89■■■□□ 2.86
POLE-219ENST00000544414 ARHGEF11O15085 1522 aa32.87■■■□□ 2.85
POLE-219ENST00000544414 CLASP1Q7Z460 1538 aa32.87■■■□□ 2.85
POLE-219ENST00000544414 GRIN2AQ12879 1464 aa32.86■■■□□ 2.85
POLE-219ENST00000544414 KIF27Q86VH2 1401 aa32.85■■■□□ 2.85
POLE-219ENST00000544414 TRIM41Q8WV44 630 aa32.83■■■□□ 2.85
POLE-219ENST00000544414 IGF1RP08069 1367 aa32.74■■■□□ 2.83
POLE-219ENST00000544414 NUP160Q12769 1436 aa32.72■■■□□ 2.83
POLE-219ENST00000544414 CEP170Q5SW79 1584 aa32.69■■■□□ 2.82
POLE-219ENST00000544414 CUL7Q14999 1698 aa32.63■■■□□ 2.81
POLE-219ENST00000544414 CYB5RLQ6IPT4 315 aa32.62■■■□□ 2.81
POLE-219ENST00000544414 ARAP1Q96P48 1450 aa32.61■■■□□ 2.81
POLE-219ENST00000544414 CARMIL1Q5VZK9 1371 aa32.55■■■□□ 2.8
POLE-219ENST00000544414 RUSC2Q8N2Y8 1516 aa32.5■■■□□ 2.79
POLE-219ENST00000544414 SHROOM2Q13796 1616 aa32.48■■■□□ 2.79
POLE-219ENST00000544414 JPH4Q96JJ6 628 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms