RNA–Protein interactions for RNA: ENST00000543599.5

RGMA-204, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RGMA, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-204ENST00000543599 NISCHQ9Y2I1 1504 aa29.07■■■□□ 2.24
RGMA-204ENST00000543599 SHROOM4Q9ULL8 1493 aa25.32■■□□□ 1.64
RGMA-204ENST00000543599 DCAF8L2P0C7V8 631 aa24.98■■□□□ 1.59
RGMA-204ENST00000543599 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
RGMA-204ENST00000543599 CCDC180Q9P1Z9 1646 aa24.51■■□□□ 1.51
RGMA-204ENST00000543599 ZCCHC6Q5VYS8 1495 aaKnown RBP24.49■■□□□ 1.51
RGMA-204ENST00000543599 PELP1Q8IZL8 1130 aaKnown RBP23.74■■□□□ 1.39
RGMA-204ENST00000543599 CHIC1Q5VXU3 224 aa23.73■■□□□ 1.39
RGMA-204ENST00000543599 DCAF1Q9Y4B6 1507 aa23.57■■□□□ 1.36
RGMA-204ENST00000543599 MYO15BQ96JP2 1530 aa23.51■■□□□ 1.35
RGMA-204ENST00000543599 MYT1Q01538 1121 aa23.47■■□□□ 1.35
RGMA-204ENST00000543599 ABCC9O60706 1549 aa23.43■■□□□ 1.34
RGMA-204ENST00000543599 SCRIBQ14160 1630 aa23.4■■□□□ 1.34
RGMA-204ENST00000543599 LOC105371045A0A1W2PR82 267 aa23.25■■□□□ 1.31
RGMA-204ENST00000543599 PCGF6Q9BYE7 350 aa23.11■■□□□ 1.29
RGMA-204ENST00000543599 HRCP23327 699 aa23.08■■□□□ 1.29
RGMA-204ENST00000543599 EHMT2Q96KQ7 1210 aa23.07■■□□□ 1.28
RGMA-204ENST00000543599 RSF1Q96T23 1441 aaPredicted RBP23.06■■□□□ 1.28
RGMA-204ENST00000543599 FAM9AQ8IZU1 332 aaPredicted RBP23.03■■□□□ 1.28
RGMA-204ENST00000543599 PPARGC1BQ86YN6 1023 aaKnown RBP23.02■■□□□ 1.28
RGMA-204ENST00000543599 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
RGMA-204ENST00000543599 CECR2Q9BXF3 1484 aa22.88■■□□□ 1.25
RGMA-204ENST00000543599 NACADO15069 1562 aa22.84■■□□□ 1.25
RGMA-204ENST00000543599 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
RGMA-204ENST00000543599 MROH2BQ7Z745 1585 aa22.7■■□□□ 1.22
RGMA-204ENST00000543599 TTBK1Q5TCY1 1321 aaPredicted RBP22.64■■□□□ 1.21
RGMA-204ENST00000543599 PABPN1Q86U42 306 aaKnown RBP eCLIP22.58■■□□□ 1.21
RGMA-204ENST00000543599 WIZO95785 1651 aa22.56■■□□□ 1.2
RGMA-204ENST00000543599 TRIM26Q12899 539 aaPredicted RBP22.46■■□□□ 1.19
RGMA-204ENST00000543599 PRKCSHP14314 528 aaPredicted RBP22.41■■□□□ 1.18
RGMA-204ENST00000543599 BAZ1AQ9NRL2 1556 aaPredicted RBP22.33■■□□□ 1.16
RGMA-204ENST00000543599 SLC24A1O60721 1099 aa22.2■■□□□ 1.14
RGMA-204ENST00000543599 SMARCA4P51532 1647 aa22.14■■□□□ 1.13
RGMA-204ENST00000543599 CCDC88BA6NC98 1476 aa22.14■■□□□ 1.13
RGMA-204ENST00000543599 ABCC8Q09428 1581 aa22.13■■□□□ 1.13
RGMA-204ENST00000543599 UNC13AQ9UPW8 1703 aa22.11■■□□□ 1.13
RGMA-204ENST00000543599 TOP2AP11388 1531 aaKnown RBP22.08■■□□□ 1.12
RGMA-204ENST00000543599 SCAF1Q9H7N4 1312 aaKnown RBP22.04■■□□□ 1.12
RGMA-204ENST00000543599 UBTFP17480 764 aaKnown RBP22■■□□□ 1.11
RGMA-204ENST00000543599 SMARCA2P51531 1590 aa21.98■■□□□ 1.11
RGMA-204ENST00000543599 SOGA1O94964 1423 aa21.94■■□□□ 1.1
RGMA-204ENST00000543599 BICRAQ9NZM4 1560 aa21.92■■□□□ 1.1
RGMA-204ENST00000543599 ERICH6Q7L0X2 663 aa21.9■■□□□ 1.1
RGMA-204ENST00000543599 RANGAP1P46060 587 aaPredicted RBP21.89■■□□□ 1.09
RGMA-204ENST00000543599 EIF4G1Q04637 1599 aaKnown RBP21.89■■□□□ 1.09
RGMA-204ENST00000543599 CSRNP3Q8WYN3 585 aa21.85■■□□□ 1.09
RGMA-204ENST00000543599 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.84■■□□□ 1.09
RGMA-204ENST00000543599 ZEB1P37275 1124 aaPredicted RBP21.83■■□□□ 1.09
RGMA-204ENST00000543599 RUSC2Q8N2Y8 1516 aa21.83■■□□□ 1.08
RGMA-204ENST00000543599 APLP2Q06481 763 aa21.8■■□□□ 1.08
RGMA-204ENST00000543599 CCER1Q8TC90 406 aaPredicted RBP21.77■■□□□ 1.07
RGMA-204ENST00000543599 WRNQ14191 1432 aaPredicted RBP eCLIP21.74■■□□□ 1.07
RGMA-204ENST00000543599 CEP162Q5TB80 1403 aa21.73■■□□□ 1.07
RGMA-204ENST00000543599 BAZ1BQ9UIG0 1483 aaKnown RBP21.72■■□□□ 1.07
RGMA-204ENST00000543599 ATAD2BQ9ULI0 1458 aa21.7■■□□□ 1.06
RGMA-204ENST00000543599 BCL11AQ9H165 835 aa21.6■■□□□ 1.05
RGMA-204ENST00000543599 TNIKQ9UKE5 1360 aa21.6■■□□□ 1.05
RGMA-204ENST00000543599 EEA1Q15075 1411 aa21.54■■□□□ 1.04
RGMA-204ENST00000543599 GOLGA3Q08378 1498 aa21.53■■□□□ 1.04
RGMA-204ENST00000543599 SYNJ1O43426 1573 aa21.52■■□□□ 1.04
RGMA-204ENST00000543599 PEG3Q9GZU2 1588 aa21.51■■□□□ 1.03
RGMA-204ENST00000543599 HNRNPUL2Q1KMD3 747 aaKnown RBP21.48■■□□□ 1.03
RGMA-204ENST00000543599 NEUROD1Q13562 356 aa21.46■■□□□ 1.03
RGMA-204ENST00000543599 GTF3C3Q9Y5Q9 886 aa21.42■■□□□ 1.02
RGMA-204ENST00000543599 CEP164Q9UPV0 1460 aa21.4■■□□□ 1.02
RGMA-204ENST00000543599 CLIP1P30622 1438 aa21.39■■□□□ 1.02
RGMA-204ENST00000543599 ACIN1Q9UKV3 1341 aaKnown RBP21.38■■□□□ 1.01
RGMA-204ENST00000543599 RAPGEF2Q9Y4G8 1499 aa21.36■■□□□ 1.01
RGMA-204ENST00000543599 NCAPD3P42695 1498 aa21.21■□□□□ 0.99
RGMA-204ENST00000543599 KIF21BO75037 1637 aa21.18■□□□□ 0.98
RGMA-204ENST00000543599 VPS8Q8N3P4 1428 aa21.16■□□□□ 0.98
RGMA-204ENST00000543599 TOP2BQ02880 1626 aa21.16■□□□□ 0.98
RGMA-204ENST00000543599 CENPBP07199 599 aaPredicted RBP21.15■□□□□ 0.98
RGMA-204ENST00000543599 DIEXFQ68CQ4 756 aaKnown RBP21.15■□□□□ 0.98
RGMA-204ENST00000543599 YTHDC1Q96MU7 727 aaKnown RBP21.15■□□□□ 0.98
RGMA-204ENST00000543599 CUX1P39880 1505 aa21.1■□□□□ 0.97
RGMA-204ENST00000543599 HMGXB3Q12766 1538 aa21.09■□□□□ 0.97
RGMA-204ENST00000543599 ITGAEP38570 1179 aa21.09■□□□□ 0.97
RGMA-204ENST00000543599 DAXXQ9UER7 740 aaPredicted RBP21.08■□□□□ 0.97
RGMA-204ENST00000543599 KIF27Q86VH2 1401 aa21.08■□□□□ 0.97
RGMA-204ENST00000543599 ATP1B4Q9UN42 357 aaPredicted RBP21.05■□□□□ 0.96
RGMA-204ENST00000543599 KANK4Q5T7N3 995 aaPredicted RBP21.05■□□□□ 0.96
RGMA-204ENST00000543599 CFTRP13569 1480 aa21.03■□□□□ 0.96
RGMA-204ENST00000543599 P3H3Q8IVL6 736 aa21.01■□□□□ 0.95
RGMA-204ENST00000543599 BIVM-ERCC5R4GMW8 1640 aa20.99■□□□□ 0.95
RGMA-204ENST00000543599 CUX2O14529 1486 aa20.99■□□□□ 0.95
RGMA-204ENST00000543599 PRXQ9BXM0 1461 aa20.98■□□□□ 0.95
RGMA-204ENST00000543599 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
RGMA-204ENST00000543599 ZNF316A6NFI3 1004 aaPredicted RBP20.95■□□□□ 0.94
RGMA-204ENST00000543599 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
RGMA-204ENST00000543599 ERICH3Q5RHP9 1530 aa20.87■□□□□ 0.93
RGMA-204ENST00000543599 IGF1RP08069 1367 aa20.85■□□□□ 0.93
RGMA-204ENST00000543599 CC2D2AQ9P2K1 1620 aa20.85■□□□□ 0.93
RGMA-204ENST00000543599 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.93
RGMA-204ENST00000543599 CARMIL1Q5VZK9 1371 aa20.83■□□□□ 0.93
RGMA-204ENST00000543599 ARHGAP35Q9NRY4 1499 aa20.79■□□□□ 0.92
RGMA-204ENST00000543599 NESP48681 1621 aa20.77■□□□□ 0.92
RGMA-204ENST00000543599 FANCD2Q9BXW9 1451 aa20.77■□□□□ 0.92
RGMA-204ENST00000543599 FAM50AQ14320 339 aaKnown RBP20.75■□□□□ 0.91
RGMA-204ENST00000543599 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms