RNA–Protein interactions for RNA: ENST00000543308.1

AC007848.2-201, humanhuman

BASIC

Gene AC007848.2, Length 1,727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007848.2-201ENST00000543308 NISCHQ9Y2I1 1504 aa21.81■■□□□ 1.08
AC007848.2-201ENST00000543308 CCDC180Q9P1Z9 1646 aa18.78■□□□□ 0.6
AC007848.2-201ENST00000543308 ZCCHC6Q5VYS8 1495 aaKnown RBP18.45■□□□□ 0.54
AC007848.2-201ENST00000543308 SHROOM4Q9ULL8 1493 aa18.18■□□□□ 0.5
AC007848.2-201ENST00000543308 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.49
AC007848.2-201ENST00000543308 SUPT5HO00267 1087 aaKnown RBP17.83■□□□□ 0.44
AC007848.2-201ENST00000543308 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
AC007848.2-201ENST00000543308 AEBP2Q6ZN18 517 aaPredicted RBP17.67■□□□□ 0.42
AC007848.2-201ENST00000543308 MYO15BQ96JP2 1530 aa17.65■□□□□ 0.42
AC007848.2-201ENST00000543308 ABCC9O60706 1549 aa17.4■□□□□ 0.38
AC007848.2-201ENST00000543308 CHIC1Q5VXU3 224 aa17.38■□□□□ 0.37
AC007848.2-201ENST00000543308 NACADO15069 1562 aa17.35■□□□□ 0.37
AC007848.2-201ENST00000543308 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
AC007848.2-201ENST00000543308 RSF1Q96T23 1441 aaPredicted RBP17.14■□□□□ 0.33
AC007848.2-201ENST00000543308 RB1CC1Q8TDY2 1594 aa17.06■□□□□ 0.32
AC007848.2-201ENST00000543308 CECR2Q9BXF3 1484 aa16.85■□□□□ 0.29
AC007848.2-201ENST00000543308 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
AC007848.2-201ENST00000543308 BAZ1AQ9NRL2 1556 aaPredicted RBP16.84■□□□□ 0.29
AC007848.2-201ENST00000543308 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
AC007848.2-201ENST00000543308 WIZO95785 1651 aa16.75■□□□□ 0.27
AC007848.2-201ENST00000543308 LOC105371045A0A1W2PR82 267 aa16.7■□□□□ 0.26
AC007848.2-201ENST00000543308 HRCP23327 699 aa16.68■□□□□ 0.26
AC007848.2-201ENST00000543308 UNC13AQ9UPW8 1703 aa16.67■□□□□ 0.26
AC007848.2-201ENST00000543308 SMARCA4P51532 1647 aa16.64■□□□□ 0.26
AC007848.2-201ENST00000543308 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.25
AC007848.2-201ENST00000543308 TOP2AP11388 1531 aaKnown RBP16.63■□□□□ 0.25
AC007848.2-201ENST00000543308 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
AC007848.2-201ENST00000543308 TRIM26Q12899 539 aaPredicted RBP16.54■□□□□ 0.24
AC007848.2-201ENST00000543308 SMARCA2P51531 1590 aa16.46■□□□□ 0.23
AC007848.2-201ENST00000543308 BICRAQ9NZM4 1560 aa16.45■□□□□ 0.22
AC007848.2-201ENST00000543308 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
AC007848.2-201ENST00000543308 PEG3Q9GZU2 1588 aa16.43■□□□□ 0.22
AC007848.2-201ENST00000543308 FAM9AQ8IZU1 332 aaPredicted RBP16.42■□□□□ 0.22
AC007848.2-201ENST00000543308 EEA1Q15075 1411 aa16.31■□□□□ 0.2
AC007848.2-201ENST00000543308 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
AC007848.2-201ENST00000543308 PABPN1Q86U42 306 aaKnown RBP eCLIP16.28■□□□□ 0.2
AC007848.2-201ENST00000543308 ABCC8Q09428 1581 aa16.27■□□□□ 0.19
AC007848.2-201ENST00000543308 ATAD2BQ9ULI0 1458 aa16.21■□□□□ 0.19
AC007848.2-201ENST00000543308 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
AC007848.2-201ENST00000543308 WRNQ14191 1432 aaPredicted RBP eCLIP16.16■□□□□ 0.18
AC007848.2-201ENST00000543308 TNIKQ9UKE5 1360 aa16.13■□□□□ 0.17
AC007848.2-201ENST00000543308 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
AC007848.2-201ENST00000543308 CSRNP3Q8WYN3 585 aa16.1■□□□□ 0.17
AC007848.2-201ENST00000543308 SOGA1O94964 1423 aa16.09■□□□□ 0.17
AC007848.2-201ENST00000543308 PPARGC1BQ86YN6 1023 aaKnown RBP16.08■□□□□ 0.17
AC007848.2-201ENST00000543308 GOLGA3Q08378 1498 aa16.08■□□□□ 0.16
AC007848.2-201ENST00000543308 CEP162Q5TB80 1403 aa16.07■□□□□ 0.16
AC007848.2-201ENST00000543308 HMGXB3Q12766 1538 aa16.04■□□□□ 0.16
AC007848.2-201ENST00000543308 KIF21BO75037 1637 aa16.02■□□□□ 0.15
AC007848.2-201ENST00000543308 CEP164Q9UPV0 1460 aa16.02■□□□□ 0.15
AC007848.2-201ENST00000543308 SYNJ1O43426 1573 aa16.01■□□□□ 0.15
AC007848.2-201ENST00000543308 NCAPD3P42695 1498 aa15.99■□□□□ 0.15
AC007848.2-201ENST00000543308 UBTFP17480 764 aaKnown RBP15.97■□□□□ 0.15
AC007848.2-201ENST00000543308 RUSC2Q8N2Y8 1516 aa15.96■□□□□ 0.15
AC007848.2-201ENST00000543308 TOP2BQ02880 1626 aa15.95■□□□□ 0.14
AC007848.2-201ENST00000543308 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
AC007848.2-201ENST00000543308 CLIP1P30622 1438 aa15.82■□□□□ 0.12
AC007848.2-201ENST00000543308 ERICH3Q5RHP9 1530 aa15.81■□□□□ 0.12
AC007848.2-201ENST00000543308 CFTRP13569 1480 aa15.79■□□□□ 0.12
AC007848.2-201ENST00000543308 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
AC007848.2-201ENST00000543308 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
AC007848.2-201ENST00000543308 VPS8Q8N3P4 1428 aa15.77■□□□□ 0.12
AC007848.2-201ENST00000543308 RAPGEF2Q9Y4G8 1499 aa15.76■□□□□ 0.11
AC007848.2-201ENST00000543308 APLP2Q06481 763 aa15.72■□□□□ 0.11
AC007848.2-201ENST00000543308 PRXQ9BXM0 1461 aa15.72■□□□□ 0.11
AC007848.2-201ENST00000543308 CUX1P39880 1505 aa15.71■□□□□ 0.11
AC007848.2-201ENST00000543308 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
AC007848.2-201ENST00000543308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.1
AC007848.2-201ENST00000543308 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
AC007848.2-201ENST00000543308 TTBK1Q5TCY1 1321 aaPredicted RBP15.63■□□□□ 0.09
AC007848.2-201ENST00000543308 CC2D2AQ9P2K1 1620 aa15.55■□□□□ 0.08
AC007848.2-201ENST00000543308 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
AC007848.2-201ENST00000543308 CUX2O14529 1486 aa15.5■□□□□ 0.07
AC007848.2-201ENST00000543308 FGD5Q6ZNL6 1462 aa15.47■□□□□ 0.07
AC007848.2-201ENST00000543308 RANGAP1P46060 587 aaPredicted RBP15.46■□□□□ 0.07
AC007848.2-201ENST00000543308 IGF1RP08069 1367 aa15.46■□□□□ 0.06
AC007848.2-201ENST00000543308 FANCD2Q9BXW9 1451 aa15.45■□□□□ 0.06
AC007848.2-201ENST00000543308 HNRNPUL2Q1KMD3 747 aaKnown RBP15.45■□□□□ 0.06
AC007848.2-201ENST00000543308 CLSPNQ9HAW4 1339 aa15.44■□□□□ 0.06
AC007848.2-201ENST00000543308 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
AC007848.2-201ENST00000543308 ARHGAP35Q9NRY4 1499 aa15.44■□□□□ 0.06
AC007848.2-201ENST00000543308 MAP3K1Q13233 1512 aa15.42■□□□□ 0.06
AC007848.2-201ENST00000543308 CARMIL1Q5VZK9 1371 aa15.42■□□□□ 0.06
AC007848.2-201ENST00000543308 DIEXFQ68CQ4 756 aaKnown RBP15.41■□□□□ 0.06
AC007848.2-201ENST00000543308 RRBP1Q9P2E9 1410 aaKnown RBP15.4■□□□□ 0.06
AC007848.2-201ENST00000543308 ZNF316A6NFI3 1004 aaPredicted RBP15.39■□□□□ 0.05
AC007848.2-201ENST00000543308 ABCA10Q8WWZ4 1543 aa15.37■□□□□ 0.05
AC007848.2-201ENST00000543308 LAMC3Q9Y6N6 1575 aa15.37■□□□□ 0.05
AC007848.2-201ENST00000543308 FHAD1B1AJZ9 1412 aa15.36■□□□□ 0.05
AC007848.2-201ENST00000543308 CUL7Q14999 1698 aa15.35■□□□□ 0.05
AC007848.2-201ENST00000543308 TOPBP1Q92547 1522 aa15.34■□□□□ 0.05
AC007848.2-201ENST00000543308 KANK4Q5T7N3 995 aaPredicted RBP15.31■□□□□ 0.04
AC007848.2-201ENST00000543308 TIAM1Q13009 1591 aa15.31■□□□□ 0.04
AC007848.2-201ENST00000543308 CCNB3Q8WWL7 1395 aa15.31■□□□□ 0.04
AC007848.2-201ENST00000543308 POLA1P09884 1462 aaPredicted RBP15.31■□□□□ 0.04
AC007848.2-201ENST00000543308 EFCAB5A4FU69 1503 aa15.31■□□□□ 0.04
AC007848.2-201ENST00000543308 CENPBP07199 599 aaPredicted RBP15.29■□□□□ 0.04
AC007848.2-201ENST00000543308 CFAP43Q8NDM7 1665 aa15.25■□□□□ 0.03
AC007848.2-201ENST00000543308 PDS5BQ9NTI5 1447 aa15.25■□□□□ 0.03
AC007848.2-201ENST00000543308 DHX57Q6P158 1386 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms