RNA–Protein interactions for RNA: ENST00000543284.1

PDCD2-210, Transcript of programmed cell death 2, humanhuman

TSL 2

Gene PDCD2, Length 3,255 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-210ENST00000543284 AEBP2Q6ZN18 517 aaPredicted RBP11.87□□□□□ -0.51
PDCD2-210ENST00000543284 CHIC1Q5VXU3 224 aa11.62□□□□□ -0.55
PDCD2-210ENST00000543284 PHF23Q9BUL5 403 aaPredicted RBP10.19□□□□□ -0.78
PDCD2-210ENST00000543284 SENP3Q9H4L4 574 aaPredicted RBP10.13□□□□□ -0.79
PDCD2-210ENST00000543284 PLPPR3Q6T4P5 718 aa9.47□□□□□ -0.89
PDCD2-210ENST00000543284 FOXD1Q16676 465 aa9.37□□□□□ -0.91
PDCD2-210ENST00000543284 NISCHQ9Y2I1 1504 aa9.17□□□□□ -0.94
PDCD2-210ENST00000543284 ADRA2BP18089 450 aa9.04□□□□□ -0.96
PDCD2-210ENST00000543284 PPP6R1Q9UPN7 881 aa9.01□□□□□ -0.97
PDCD2-210ENST00000543284 PIAS4Q8N2W9 510 aaPredicted RBP8.9□□□□□ -0.99
PDCD2-210ENST00000543284 CCDC180Q9P1Z9 1646 aa8.78□□□□□ -1
PDCD2-210ENST00000543284 MSH5O43196 834 aa8.67□□□□□ -1.02
PDCD2-210ENST00000543284 PPP4R3CPQ6ZMV5 832 aa8.34□□□□□ -1.07
PDCD2-210ENST00000543284 SCAF1Q9H7N4 1312 aaKnown RBP8.31□□□□□ -1.08
PDCD2-210ENST00000543284 MYO15BQ96JP2 1530 aa8.25□□□□□ -1.09
PDCD2-210ENST00000543284 MAPK8IP2Q13387 824 aaPredicted RBP8.2□□□□□ -1.1
PDCD2-210ENST00000543284 NCBP3Q53F19 620 aaKnown RBP8.16□□□□□ -1.1
PDCD2-210ENST00000543284 SHROOM4Q9ULL8 1493 aa8.14□□□□□ -1.11
PDCD2-210ENST00000543284 KCNA4P22459 653 aa8.14□□□□□ -1.11
PDCD2-210ENST00000543284 CNKSR2Q8WXI2 1034 aa8.1□□□□□ -1.11
PDCD2-210ENST00000543284 POTEDQ86YR6 584 aa8.06□□□□□ -1.12
PDCD2-210ENST00000543284 DMRT2Q9Y5R5 561 aa8.05□□□□□ -1.12
PDCD2-210ENST00000543284 NACADO15069 1562 aa8.05□□□□□ -1.12
PDCD2-210ENST00000543284 DCAF1Q9Y4B6 1507 aa8.03□□□□□ -1.12
PDCD2-210ENST00000543284 UNC13AQ9UPW8 1703 aa8.02□□□□□ -1.13
PDCD2-210ENST00000543284 RB1CC1Q8TDY2 1594 aa8□□□□□ -1.13
PDCD2-210ENST00000543284 NPM3O75607 178 aaKnown RBP7.98□□□□□ -1.13
PDCD2-210ENST00000543284 RNF216Q9NWF9 866 aaPredicted RBP7.92□□□□□ -1.14
PDCD2-210ENST00000543284 HOXD11P31277 338 aaPredicted RBP7.87□□□□□ -1.15
PDCD2-210ENST00000543284 DCAF8L1A6NGE4 600 aa7.84□□□□□ -1.15
PDCD2-210ENST00000543284 SLC24A1O60721 1099 aa7.81□□□□□ -1.16
PDCD2-210ENST00000543284 SLC4A1APQ9BWU0 796 aaKnown RBP7.79□□□□□ -1.16
PDCD2-210ENST00000543284 BICRAQ9NZM4 1560 aa7.78□□□□□ -1.16
PDCD2-210ENST00000543284 ABCC9O60706 1549 aa7.77□□□□□ -1.17
PDCD2-210ENST00000543284 ZCCHC6Q5VYS8 1495 aaKnown RBP7.68□□□□□ -1.18
PDCD2-210ENST00000543284 DNAJC5BQ9UF47 199 aa7.65□□□□□ -1.18
PDCD2-210ENST00000543284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.61□□□□□ -1.19
PDCD2-210ENST00000543284 EHMT2Q96KQ7 1210 aa7.6□□□□□ -1.19
PDCD2-210ENST00000543284 SLC4A2P04920 1241 aa7.51□□□□□ -1.21
PDCD2-210ENST00000543284 FOXD4L1Q9NU39 408 aa7.5□□□□□ -1.21
PDCD2-210ENST00000543284 PEG3Q9GZU2 1588 aa7.49□□□□□ -1.21
PDCD2-210ENST00000543284 EIF4G1Q04637 1599 aaKnown RBP7.46□□□□□ -1.22
PDCD2-210ENST00000543284 CC2D2AQ9P2K1 1620 aa7.44□□□□□ -1.22
PDCD2-210ENST00000543284 ZBTB22O15209 634 aa7.44□□□□□ -1.22
PDCD2-210ENST00000543284 SMARCA2P51531 1590 aa7.44□□□□□ -1.22
PDCD2-210ENST00000543284 CSRNP3Q8WYN3 585 aa7.42□□□□□ -1.22
PDCD2-210ENST00000543284 HMGXB3Q12766 1538 aa7.4□□□□□ -1.22
PDCD2-210ENST00000543284 U3KPZ7 1027 aaPredicted RBP7.4□□□□□ -1.22
PDCD2-210ENST00000543284 RNF39Q9H2S5 420 aa7.4□□□□□ -1.22
PDCD2-210ENST00000543284 MYCNP04198 464 aaPredicted RBP7.4□□□□□ -1.23
PDCD2-210ENST00000543284 PRDM2Q13029 1718 aa7.39□□□□□ -1.23
PDCD2-210ENST00000543284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.37□□□□□ -1.23
PDCD2-210ENST00000543284 HNRNPUL2Q1KMD3 747 aaKnown RBP7.37□□□□□ -1.23
PDCD2-210ENST00000543284 C1QBPQ07021 282 aaKnown RBP7.34□□□□□ -1.23
PDCD2-210ENST00000543284 SAMD1Q6SPF0 538 aaPredicted RBP7.33□□□□□ -1.24
PDCD2-210ENST00000543284 CUX2O14529 1486 aa7.32□□□□□ -1.24
PDCD2-210ENST00000543284 APLP2Q06481 763 aa7.31□□□□□ -1.24
PDCD2-210ENST00000543284 CACNB1Q02641 598 aaPredicted RBP7.3□□□□□ -1.24
PDCD2-210ENST00000543284 NCAPD3P42695 1498 aa7.28□□□□□ -1.24
PDCD2-210ENST00000543284 CAPN15O75808 1086 aa7.25□□□□□ -1.25
PDCD2-210ENST00000543284 PRKCSHP14314 528 aaPredicted RBP7.24□□□□□ -1.25
PDCD2-210ENST00000543284 SMARCA4P51532 1647 aa7.24□□□□□ -1.25
PDCD2-210ENST00000543284 THOC2Q8NI27 1593 aaKnown RBP7.24□□□□□ -1.25
PDCD2-210ENST00000543284 SCRIBQ14160 1630 aa7.24□□□□□ -1.25
PDCD2-210ENST00000543284 LAMC3Q9Y6N6 1575 aa7.24□□□□□ -1.25
PDCD2-210ENST00000543284 DNAJC5Q9H3Z4 198 aa7.23□□□□□ -1.25
PDCD2-210ENST00000543284 TRHP20396 242 aaPredicted RBP7.22□□□□□ -1.25
PDCD2-210ENST00000543284 SPINK5Q9NQ38 1064 aaPredicted RBP7.22□□□□□ -1.25
PDCD2-210ENST00000543284 CECR2Q9BXF3 1484 aa7.21□□□□□ -1.25
PDCD2-210ENST00000543284 ATXN8OSP0DMR3 200 aa7.21□□□□□ -1.26
PDCD2-210ENST00000543284 WDR97A6NE52 1622 aa7.19□□□□□ -1.26
PDCD2-210ENST00000543284 ZNF219Q9P2Y4 722 aaPredicted RBP7.18□□□□□ -1.26
PDCD2-210ENST00000543284 BAZ1AQ9NRL2 1556 aaPredicted RBP7.17□□□□□ -1.26
PDCD2-210ENST00000543284 ATF5Q9Y2D1 282 aaPredicted RBP7.16□□□□□ -1.26
PDCD2-210ENST00000543284 DAXXQ9UER7 740 aaPredicted RBP7.12□□□□□ -1.27
PDCD2-210ENST00000543284 ABCB7O75027 752 aa7.1□□□□□ -1.27
PDCD2-210ENST00000543284 WDR62O43379 1518 aa7.1□□□□□ -1.27
PDCD2-210ENST00000543284 ATAD2BQ9ULI0 1458 aa7.09□□□□□ -1.27
PDCD2-210ENST00000543284 KIF21AQ7Z4S6 1674 aa7.07□□□□□ -1.28
PDCD2-210ENST00000543284 MYT1Q01538 1121 aa7.07□□□□□ -1.28
PDCD2-210ENST00000543284 POLA2Q14181 598 aa7.07□□□□□ -1.28
PDCD2-210ENST00000543284 DSG3P32926 999 aa7.05□□□□□ -1.28
PDCD2-210ENST00000543284 PELP1Q8IZL8 1130 aaKnown RBP7.03□□□□□ -1.28
PDCD2-210ENST00000543284 RTN4Q9NQC3 1192 aaKnown RBP6.99□□□□□ -1.29
PDCD2-210ENST00000543284 BAZ1BQ9UIG0 1483 aaKnown RBP6.96□□□□□ -1.29
PDCD2-210ENST00000543284 TTBK1Q5TCY1 1321 aaPredicted RBP6.96□□□□□ -1.3
PDCD2-210ENST00000543284 TOP2AP11388 1531 aaKnown RBP6.96□□□□□ -1.3
PDCD2-210ENST00000543284 ZBTB12Q9Y330 459 aaPredicted RBP6.95□□□□□ -1.3
PDCD2-210ENST00000543284 FBLN2P98095 1184 aa6.95□□□□□ -1.3
PDCD2-210ENST00000543284 ERICH6Q7L0X2 663 aa6.94□□□□□ -1.3
PDCD2-210ENST00000543284 MRC2Q9UBG0 1479 aa6.91□□□□□ -1.3
PDCD2-210ENST00000543284 ABCC8Q09428 1581 aa6.9□□□□□ -1.31
PDCD2-210ENST00000543284 CFTRP13569 1480 aa6.9□□□□□ -1.31
PDCD2-210ENST00000543284 MROH2BQ7Z745 1585 aa6.87□□□□□ -1.31
PDCD2-210ENST00000543284 PDS5BQ9NTI5 1447 aa6.87□□□□□ -1.31
PDCD2-210ENST00000543284 PABPN1Q86U42 306 aaKnown RBP eCLIP6.86□□□□□ -1.31
PDCD2-210ENST00000543284 TARBP1Q13395 1621 aaKnown RBP6.85□□□□□ -1.31
PDCD2-210ENST00000543284 MKRN4PQ13434 485 aaPredicted RBP6.84□□□□□ -1.31
PDCD2-210ENST00000543284 WIZO95785 1651 aa6.83□□□□□ -1.32
PDCD2-210ENST00000543284 OSCARQ8IYS5 282 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms