RNA–Protein interactions for RNA: ENST00000542954.5

KCTD10-215, Transcript of potassium channel tetramerization domain containing 10, human

TSL 5

Gene KCTD10, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCTD10-215	ENST00000542954	NISCH	Q9Y2I1	1504 aa		44.55	■■■■■ 4.72
KCTD10-215	ENST00000542954	ABCC9	O60706	1549 aa		40.45	■■■■■ 4.07
KCTD10-215	ENST00000542954	CCDC180	Q9P1Z9	1646 aa		40.11	■■■■■ 4.01
KCTD10-215	ENST00000542954	DNAJC5B	Q9UF47	199 aa		38.32	■■■■□ 3.72
KCTD10-215	ENST00000542954	RB1CC1	Q8TDY2	1594 aa		38.28	■■■■□ 3.72
KCTD10-215	ENST00000542954	NACAD	O15069	1562 aa		37.94	■■■■□ 3.66
KCTD10-215	ENST00000542954	DCAF8L2	P0C7V8	631 aa		37.62	■■■■□ 3.61
KCTD10-215	ENST00000542954	UNC13A	Q9UPW8	1703 aa		37.61	■■■■□ 3.61
KCTD10-215	ENST00000542954	PABPN1	Q86U42	306 aa	Known RBP eCLIP	37.59	■■■■□ 3.61
KCTD10-215	ENST00000542954	BICRA	Q9NZM4	1560 aa		37.34	■■■■□ 3.57
KCTD10-215	ENST00000542954	MYO15B	Q96JP2	1530 aa		37.31	■■■■□ 3.56
KCTD10-215	ENST00000542954	ZCCHC6	Q5VYS8	1495 aa	Known RBP	36.88	■■■■□ 3.5
KCTD10-215	ENST00000542954	DCAF1	Q9Y4B6	1507 aa		36.74	■■■■□ 3.47
KCTD10-215	ENST00000542954	SHROOM4	Q9ULL8	1493 aa		36.6	■■■■□ 3.45
KCTD10-215	ENST00000542954	SCRIB	Q14160	1630 aa		36.59	■■■■□ 3.45
KCTD10-215	ENST00000542954	CC2D2A	Q9P2K1	1620 aa		36.54	■■■■□ 3.44
KCTD10-215	ENST00000542954	CECR2	Q9BXF3	1484 aa		36.43	■■■■□ 3.42
KCTD10-215	ENST00000542954	EIF4G1	Q04637	1599 aa	Known RBP	36.37	■■■■□ 3.41
KCTD10-215	ENST00000542954	DNAJC5	Q9H3Z4	198 aa		35.27	■■■■□ 3.24
KCTD10-215	ENST00000542954	NCAPD3	P42695	1498 aa		35.06	■■■■□ 3.2
KCTD10-215	ENST00000542954	ATAD2B	Q9ULI0	1458 aa		34.94	■■■■□ 3.18
KCTD10-215	ENST00000542954	CUX2	O14529	1486 aa		34.9	■■■■□ 3.18
KCTD10-215	ENST00000542954	SMARCA4	P51532	1647 aa		34.85	■■■■□ 3.17
KCTD10-215	ENST00000542954	ERCC6	Q03468	1493 aa		34.84	■■■■□ 3.17
KCTD10-215	ENST00000542954	HMGXB3	Q12766	1538 aa		34.78	■■■■□ 3.16
KCTD10-215	ENST00000542954	SMARCA2	P51531	1590 aa		34.76	■■■■□ 3.16
KCTD10-215	ENST00000542954	NES	P48681	1621 aa		34.72	■■■■□ 3.15
KCTD10-215	ENST00000542954	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	34.55	■■■■□ 3.12
KCTD10-215	ENST00000542954	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.54	■■■■□ 3.12
KCTD10-215	ENST00000542954	PEG3	Q9GZU2	1588 aa		34.5	■■■■□ 3.11
KCTD10-215	ENST00000542954	THOC2	Q8NI27	1593 aa	Known RBP	34.42	■■■■□ 3.1
KCTD10-215	ENST00000542954	MROH2B	Q7Z745	1585 aa		34.39	■■■■□ 3.1
KCTD10-215	ENST00000542954	LAMC3	Q9Y6N6	1575 aa		34.3	■■■■□ 3.08
KCTD10-215	ENST00000542954	KIF21A	Q7Z4S6	1674 aa		34.26	■■■■□ 3.08
KCTD10-215	ENST00000542954	PDS5B	Q9NTI5	1447 aa		34.04	■■■■□ 3.04
KCTD10-215	ENST00000542954	WIZ	O95785	1651 aa		33.97	■■■■□ 3.03
KCTD10-215	ENST00000542954	CADPS	Q9ULU8	1353 aa		33.95	■■■■□ 3.02
KCTD10-215	ENST00000542954	MRC2	Q9UBG0	1479 aa		33.85	■■■■□ 3.01
KCTD10-215	ENST00000542954	WDR62	O43379	1518 aa		33.83	■■■■□ 3.01
KCTD10-215	ENST00000542954	CEP164	Q9UPV0	1460 aa		33.63	■■■□□ 2.97
KCTD10-215	ENST00000542954	FANCD2	Q9BXW9	1451 aa		33.6	■■■□□ 2.97
KCTD10-215	ENST00000542954	TRIM41	Q8WV44	630 aa		33.58	■■■□□ 2.97
KCTD10-215	ENST00000542954	CFTR	P13569	1480 aa		33.54	■■■□□ 2.96
KCTD10-215	ENST00000542954	RSF1	Q96T23	1441 aa	Predicted RBP	33.52	■■■□□ 2.96
KCTD10-215	ENST00000542954	TOP2A	P11388	1531 aa	Known RBP	33.45	■■■□□ 2.95
KCTD10-215	ENST00000542954	URB2	Q14146	1524 aa	Known RBP	33.42	■■■□□ 2.94
KCTD10-215	ENST00000542954	PRDM2	Q13029	1718 aa		33.22	■■■□□ 2.91
KCTD10-215	ENST00000542954	OSCAR	Q8IYS5	282 aa		33.2	■■■□□ 2.91
KCTD10-215	ENST00000542954	CCDC88B	A6NC98	1476 aa		33.09	■■■□□ 2.89
KCTD10-215	ENST00000542954	ZNF608	Q9ULD9	1512 aa	Predicted RBP	33.07	■■■□□ 2.89
KCTD10-215	ENST00000542954	RIMBP3C	A6NJZ7	1639 aa		32.97	■■■□□ 2.87
KCTD10-215	ENST00000542954	RIMBP3B	A6NNM3	1639 aa		32.97	■■■□□ 2.87
KCTD10-215	ENST00000542954	RIMBP3	Q9UFD9	1639 aa		32.97	■■■□□ 2.87
KCTD10-215	ENST00000542954	IFT140	Q96RY7	1462 aa		32.97	■■■□□ 2.87
KCTD10-215	ENST00000542954	TOPBP1	Q92547	1522 aa		32.97	■■■□□ 2.87
KCTD10-215	ENST00000542954	EIF4G3	O43432	1585 aa	Known RBP	32.85	■■■□□ 2.85
KCTD10-215	ENST00000542954	ARHGEF11	O15085	1522 aa		32.8	■■■□□ 2.84
KCTD10-215	ENST00000542954	DNMBP	Q6XZF7	1577 aa		32.79	■■■□□ 2.84
KCTD10-215	ENST00000542954	TARBP1	Q13395	1621 aa	Known RBP	32.73	■■■□□ 2.83
KCTD10-215	ENST00000542954	ABCC8	Q09428	1581 aa		32.72	■■■□□ 2.83
KCTD10-215	ENST00000542954	CHD1	O14646	1710 aa		32.69	■■■□□ 2.82
KCTD10-215	ENST00000542954	AQR	O60306	1485 aa	Known RBP eCLIP	32.68	■■■□□ 2.82	1e-7	■■■■■ 32.3
KCTD10-215	ENST00000542954	POLA1	P09884	1462 aa	Predicted RBP	32.61	■■■□□ 2.81
KCTD10-215	ENST00000542954	RAD54L2	Q9Y4B4	1467 aa		32.52	■■■□□ 2.8
KCTD10-215	ENST00000542954	CYB5RL	Q6IPT4	315 aa		32.5	■■■□□ 2.79
KCTD10-215	ENST00000542954	ARAP1	Q96P48	1450 aa		32.49	■■■□□ 2.79
KCTD10-215	ENST00000542954	TDRD9	Q8NDG6	1382 aa	Known RBP	32.42	■■■□□ 2.78
KCTD10-215	ENST00000542954	FBLN2	P98095	1184 aa		32.41	■■■□□ 2.78
KCTD10-215	ENST00000542954	SOGA1	O94964	1423 aa		32.38	■■■□□ 2.77
KCTD10-215	ENST00000542954	FGD5	Q6ZNL6	1462 aa		32.35	■■■□□ 2.77
KCTD10-215	ENST00000542954	SNAPC4	Q5SXM2	1469 aa		32.33	■■■□□ 2.77
KCTD10-215	ENST00000542954	CUX1	P39880	1505 aa		32.32	■■■□□ 2.76
KCTD10-215	ENST00000542954	CLASP1	Q7Z460	1538 aa		32.29	■■■□□ 2.76
KCTD10-215	ENST00000542954	WDR97	A6NE52	1622 aa		32.24	■■■□□ 2.75
KCTD10-215	ENST00000542954	TRH	P20396	242 aa	Predicted RBP	32.18	■■■□□ 2.74
KCTD10-215	ENST00000542954	MAGI1	Q96QZ7	1491 aa	Predicted RBP	32.17	■■■□□ 2.74
KCTD10-215	ENST00000542954	GRIN2B	Q13224	1484 aa		32.14	■■■□□ 2.74
KCTD10-215	ENST00000542954	SYNJ1	O43426	1573 aa		32.13	■■■□□ 2.73
KCTD10-215	ENST00000542954	CHMP7	Q8WUX9	453 aa	Predicted RBP	32.1	■■■□□ 2.73
KCTD10-215	ENST00000542954	SYNJ2	O15056	1496 aa		32.09	■■■□□ 2.73
KCTD10-215	ENST00000542954	PBRM1	Q86U86	1689 aa		32.08	■■■□□ 2.73
KCTD10-215	ENST00000542954	GAPVD1	Q14C86	1478 aa		32	■■■□□ 2.71
KCTD10-215	ENST00000542954	ABCA5	Q8WWZ7	1642 aa		31.99	■■■□□ 2.71
KCTD10-215	ENST00000542954	ABCA10	Q8WWZ4	1543 aa		31.95	■■■□□ 2.7
KCTD10-215	ENST00000542954	ERCC6L2	Q5T890	1561 aa		31.84	■■■□□ 2.69
KCTD10-215	ENST00000542954	GRIN2A	Q12879	1464 aa		31.77	■■■□□ 2.68
KCTD10-215	ENST00000542954	ADAMTS12	P58397	1594 aa		31.76	■■■□□ 2.67
KCTD10-215	ENST00000542954	CEP170	Q5SW79	1584 aa		31.74	■■■□□ 2.67
KCTD10-215	ENST00000542954	SUPT5H	O00267	1087 aa	Known RBP	31.71	■■■□□ 2.67
KCTD10-215	ENST00000542954	BIVM-ERCC5	R4GMW8	1640 aa		31.7	■■■□□ 2.66
KCTD10-215	ENST00000542954	NUP160	Q12769	1436 aa		31.68	■■■□□ 2.66
KCTD10-215	ENST00000542954	WRN	Q14191	1432 aa	Predicted RBP eCLIP	31.68	■■■□□ 2.66
KCTD10-215	ENST00000542954	TOP2B	Q02880	1626 aa		31.67	■■■□□ 2.66
KCTD10-215	ENST00000542954	SHROOM2	Q13796	1616 aa		31.63	■■■□□ 2.65
KCTD10-215	ENST00000542954	FHAD1	B1AJZ9	1412 aa		31.56	■■■□□ 2.64
KCTD10-215	ENST00000542954	ERICH3	Q5RHP9	1530 aa		31.5	■■■□□ 2.63
KCTD10-215	ENST00000542954	KIF13A	Q9H1H9	1805 aa		31.42	■■■□□ 2.62
KCTD10-215	ENST00000542954	AEBP2	Q6ZN18	517 aa	Predicted RBP	31.4	■■■□□ 2.62
KCTD10-215	ENST00000542954	PRG4	Q92954	1404 aa	Predicted RBP	31.37	■■■□□ 2.61
KCTD10-215	ENST00000542954	RUSC2	Q8N2Y8	1516 aa		31.33	■■■□□ 2.61

Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms