RNA–Protein interactions for RNA: ENST00000542660.1

AC009509.1-203, humanhuman

TSL 3

Gene AC009509.1, Length 691 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009509.1-203ENST00000542660 AEBP2Q6ZN18 517 aaPredicted RBP25.46■■□□□ 1.67
AC009509.1-203ENST00000542660 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
AC009509.1-203ENST00000542660 SENP3Q9H4L4 574 aaPredicted RBP21.79■■□□□ 1.08
AC009509.1-203ENST00000542660 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
AC009509.1-203ENST00000542660 FOXD1Q16676 465 aa20.16■□□□□ 0.82
AC009509.1-203ENST00000542660 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
AC009509.1-203ENST00000542660 ADRA2BP18089 450 aa19.13■□□□□ 0.65
AC009509.1-203ENST00000542660 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
AC009509.1-203ENST00000542660 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.64
AC009509.1-203ENST00000542660 MSH5O43196 834 aa18.83■□□□□ 0.6
AC009509.1-203ENST00000542660 POTEDQ86YR6 584 aa18.15■□□□□ 0.5
AC009509.1-203ENST00000542660 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
AC009509.1-203ENST00000542660 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
AC009509.1-203ENST00000542660 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
AC009509.1-203ENST00000542660 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
AC009509.1-203ENST00000542660 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
AC009509.1-203ENST00000542660 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
AC009509.1-203ENST00000542660 RNF216Q9NWF9 866 aaPredicted RBP16.85■□□□□ 0.29
AC009509.1-203ENST00000542660 HOXD11P31277 338 aaPredicted RBP16.83■□□□□ 0.28
AC009509.1-203ENST00000542660 KCNA4P22459 653 aa16.73■□□□□ 0.27
AC009509.1-203ENST00000542660 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
AC009509.1-203ENST00000542660 DCAF8L1A6NGE4 600 aa16.63■□□□□ 0.25
AC009509.1-203ENST00000542660 DNAJC5BQ9UF47 199 aa16.28■□□□□ 0.2
AC009509.1-203ENST00000542660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
AC009509.1-203ENST00000542660 RNF39Q9H2S5 420 aa16.03■□□□□ 0.16
AC009509.1-203ENST00000542660 SLC4A1APQ9BWU0 796 aaKnown RBP15.95■□□□□ 0.14
AC009509.1-203ENST00000542660 CACNB1Q02641 598 aaPredicted RBP15.88■□□□□ 0.13
AC009509.1-203ENST00000542660 C1QBPQ07021 282 aaKnown RBP15.88■□□□□ 0.13
AC009509.1-203ENST00000542660 SLC4A2P04920 1241 aa15.8■□□□□ 0.12
AC009509.1-203ENST00000542660 U3KPZ7 1027 aaPredicted RBP15.73■□□□□ 0.11
AC009509.1-203ENST00000542660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
AC009509.1-203ENST00000542660 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
AC009509.1-203ENST00000542660 FOXD4L1Q9NU39 408 aa15.55■□□□□ 0.08
AC009509.1-203ENST00000542660 APLP2Q06481 763 aa15.52■□□□□ 0.08
AC009509.1-203ENST00000542660 MYCNP04198 464 aaPredicted RBP15.51■□□□□ 0.07
AC009509.1-203ENST00000542660 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
AC009509.1-203ENST00000542660 CAPN15O75808 1086 aa15.39■□□□□ 0.05
AC009509.1-203ENST00000542660 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
AC009509.1-203ENST00000542660 ZBTB22O15209 634 aa15.34■□□□□ 0.05
AC009509.1-203ENST00000542660 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
AC009509.1-203ENST00000542660 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
AC009509.1-203ENST00000542660 DSG3P32926 999 aa15.14■□□□□ 0.01
AC009509.1-203ENST00000542660 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
AC009509.1-203ENST00000542660 ATXN8OSP0DMR3 200 aa15.06■□□□□ 0
AC009509.1-203ENST00000542660 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
AC009509.1-203ENST00000542660 ABCB7O75027 752 aa15.03■□□□□ -0
AC009509.1-203ENST00000542660 ATF5Q9Y2D1 282 aaPredicted RBP14.98□□□□□ -0.01
AC009509.1-203ENST00000542660 POLA2Q14181 598 aa14.9□□□□□ -0.02
AC009509.1-203ENST00000542660 ZBTB12Q9Y330 459 aaPredicted RBP14.74□□□□□ -0.05
AC009509.1-203ENST00000542660 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
AC009509.1-203ENST00000542660 FBLN2P98095 1184 aa14.54□□□□□ -0.08
AC009509.1-203ENST00000542660 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
AC009509.1-203ENST00000542660 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
AC009509.1-203ENST00000542660 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
AC009509.1-203ENST00000542660 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
AC009509.1-203ENST00000542660 SPDYE2Q495Y8 402 aa14.27□□□□□ -0.13
AC009509.1-203ENST00000542660 AKT1S1Q96B36 256 aa14.27□□□□□ -0.13
AC009509.1-203ENST00000542660 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
AC009509.1-203ENST00000542660 POTEHQ6S545 545 aa14.09□□□□□ -0.15
AC009509.1-203ENST00000542660 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
AC009509.1-203ENST00000542660 SSUH2Q9Y2M2 353 aa14.08□□□□□ -0.16
AC009509.1-203ENST00000542660 CHRDL2Q6WN34 429 aa14□□□□□ -0.17
AC009509.1-203ENST00000542660 SPDYE4A6NLX3 237 aa13.96□□□□□ -0.17
AC009509.1-203ENST00000542660 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
AC009509.1-203ENST00000542660 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
AC009509.1-203ENST00000542660 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
AC009509.1-203ENST00000542660 CLEC11AQ9Y240 323 aa13.86□□□□□ -0.19
AC009509.1-203ENST00000542660 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
AC009509.1-203ENST00000542660 STAG3Q9UJ98 1225 aa13.73□□□□□ -0.21
AC009509.1-203ENST00000542660 FXR2P51116 673 aaKnown RBP eCLIP13.72□□□□□ -0.21
AC009509.1-203ENST00000542660 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
AC009509.1-203ENST00000542660 FKBP8Q14318 412 aa13.68□□□□□ -0.22
AC009509.1-203ENST00000542660 PROM2Q8N271 834 aa13.63□□□□□ -0.23
AC009509.1-203ENST00000542660 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
AC009509.1-203ENST00000542660 CHADLQ6NUI6 762 aa13.49□□□□□ -0.25
AC009509.1-203ENST00000542660 HAX1O00165 279 aa13.41□□□□□ -0.26
AC009509.1-203ENST00000542660 CREBZFQ9NS37 354 aa13.39□□□□□ -0.27
AC009509.1-203ENST00000542660 FARP1Q9Y4F1 1045 aaPredicted RBP13.37□□□□□ -0.27
AC009509.1-203ENST00000542660 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
AC009509.1-203ENST00000542660 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
AC009509.1-203ENST00000542660 MIER1Q8N108 512 aa13.28□□□□□ -0.28
AC009509.1-203ENST00000542660 NPM1P06748 294 aaKnown RBP eCLIP13.27□□□□□ -0.29
AC009509.1-203ENST00000542660 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
AC009509.1-203ENST00000542660 C19orf67A6NJJ6 358 aa13.26□□□□□ -0.29
AC009509.1-203ENST00000542660 SP7Q8TDD2 431 aaPredicted RBP13.22□□□□□ -0.29
AC009509.1-203ENST00000542660 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
AC009509.1-203ENST00000542660 ZBTB47Q9UFB7 747 aaPredicted RBP13.19□□□□□ -0.3
AC009509.1-203ENST00000542660 MNX1P50219 401 aaPredicted RBP13.18□□□□□ -0.3
AC009509.1-203ENST00000542660 PAK3O75914 559 aaPredicted RBP13.15□□□□□ -0.3
AC009509.1-203ENST00000542660 EVX2Q03828 476 aa13.14□□□□□ -0.31
AC009509.1-203ENST00000542660 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
AC009509.1-203ENST00000542660 ZRANB1Q9UGI0 708 aa13.08□□□□□ -0.32
AC009509.1-203ENST00000542660 CLCN6P51797 869 aa13.02□□□□□ -0.33
AC009509.1-203ENST00000542660 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
AC009509.1-203ENST00000542660 ZNF579Q8NAF0 562 aaKnown RBP13.01□□□□□ -0.33
AC009509.1-203ENST00000542660 TSPYL2Q9H2G4 693 aaPredicted RBP12.97□□□□□ -0.33
AC009509.1-203ENST00000542660 GABBR2O75899 941 aa12.96□□□□□ -0.33
AC009509.1-203ENST00000542660 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
AC009509.1-203ENST00000542660 FAM212AQ96EL1 285 aa12.92□□□□□ -0.34
AC009509.1-203ENST00000542660 NUBP1P53384 320 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms