RNA–Protein interactions for RNA: ENST00000542321.6

RGMA-203, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGMA, Length 3,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-203ENST00000542321 NISCHQ9Y2I1 1504 aa28.9■■■□□ 2.22
RGMA-203ENST00000542321 CCDC180Q9P1Z9 1646 aa25.09■■□□□ 1.61
RGMA-203ENST00000542321 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
RGMA-203ENST00000542321 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
RGMA-203ENST00000542321 MYO15BQ96JP2 1530 aa23.65■■□□□ 1.38
RGMA-203ENST00000542321 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
RGMA-203ENST00000542321 PELP1Q8IZL8 1130 aaKnown RBP23.5■■□□□ 1.35
RGMA-203ENST00000542321 MYT1Q01538 1121 aa23.46■■□□□ 1.35
RGMA-203ENST00000542321 SLC24A1O60721 1099 aa23.4■■□□□ 1.34
RGMA-203ENST00000542321 ABCC9O60706 1549 aa23.13■■□□□ 1.29
RGMA-203ENST00000542321 DCAF8L2P0C7V8 631 aa23.07■■□□□ 1.28
RGMA-203ENST00000542321 NACADO15069 1562 aa23.05■■□□□ 1.28
RGMA-203ENST00000542321 SUPT5HO00267 1087 aaKnown RBP22.98■■□□□ 1.27
RGMA-203ENST00000542321 TTBK1Q5TCY1 1321 aaPredicted RBP22.89■■□□□ 1.26
RGMA-203ENST00000542321 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
RGMA-203ENST00000542321 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
RGMA-203ENST00000542321 RSF1Q96T23 1441 aaPredicted RBP22.63■■□□□ 1.21
RGMA-203ENST00000542321 PRKCSHP14314 528 aaPredicted RBP22.63■■□□□ 1.21
RGMA-203ENST00000542321 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
RGMA-203ENST00000542321 BAZ1AQ9NRL2 1556 aaPredicted RBP22.3■■□□□ 1.16
RGMA-203ENST00000542321 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
RGMA-203ENST00000542321 UNC13AQ9UPW8 1703 aa22.25■■□□□ 1.15
RGMA-203ENST00000542321 APLP2Q06481 763 aa22.23■■□□□ 1.15
RGMA-203ENST00000542321 CECR2Q9BXF3 1484 aa22.2■■□□□ 1.14
RGMA-203ENST00000542321 ERICH6Q7L0X2 663 aa22.18■■□□□ 1.14
RGMA-203ENST00000542321 EIF4G1Q04637 1599 aaKnown RBP22.17■■□□□ 1.14
RGMA-203ENST00000542321 WIZO95785 1651 aa22.12■■□□□ 1.13
RGMA-203ENST00000542321 SMARCA4P51532 1647 aa22.08■■□□□ 1.13
RGMA-203ENST00000542321 TOP2AP11388 1531 aaKnown RBP22.06■■□□□ 1.12
RGMA-203ENST00000542321 PEG3Q9GZU2 1588 aa21.98■■□□□ 1.11
RGMA-203ENST00000542321 DAXXQ9UER7 740 aaPredicted RBP21.96■■□□□ 1.11
RGMA-203ENST00000542321 BICRAQ9NZM4 1560 aa21.92■■□□□ 1.1
RGMA-203ENST00000542321 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
RGMA-203ENST00000542321 HRCP23327 699 aa21.75■■□□□ 1.07
RGMA-203ENST00000542321 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
RGMA-203ENST00000542321 CCDC88BA6NC98 1476 aa21.69■■□□□ 1.06
RGMA-203ENST00000542321 LOC105371045A0A1W2PR82 267 aa21.64■■□□□ 1.05
RGMA-203ENST00000542321 TRIM26Q12899 539 aaPredicted RBP21.53■■□□□ 1.04
RGMA-203ENST00000542321 EEA1Q15075 1411 aa21.53■■□□□ 1.04
RGMA-203ENST00000542321 PCGF6Q9BYE7 350 aa21.45■■□□□ 1.02
RGMA-203ENST00000542321 ATAD2BQ9ULI0 1458 aa21.43■■□□□ 1.02
RGMA-203ENST00000542321 ABCC8Q09428 1581 aa21.38■■□□□ 1.01
RGMA-203ENST00000542321 WRNQ14191 1432 aaPredicted RBP eCLIP21.36■■□□□ 1.01
RGMA-203ENST00000542321 PABPN1Q86U42 306 aaKnown RBP eCLIP21.35■■□□□ 1.01
RGMA-203ENST00000542321 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
RGMA-203ENST00000542321 BCL11AQ9H165 835 aa21.3■■□□□ 1
RGMA-203ENST00000542321 BAZ1BQ9UIG0 1483 aaKnown RBP21.29■■□□□ 1
RGMA-203ENST00000542321 KIF21BO75037 1637 aa21.26■□□□□ 0.99
RGMA-203ENST00000542321 TNIKQ9UKE5 1360 aa21.23■□□□□ 0.99
RGMA-203ENST00000542321 BIVM-ERCC5R4GMW8 1640 aa21.21■□□□□ 0.99
RGMA-203ENST00000542321 NCAPD3P42695 1498 aa21.21■□□□□ 0.99
RGMA-203ENST00000542321 ZEB1P37275 1124 aaPredicted RBP21.2■□□□□ 0.98
RGMA-203ENST00000542321 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
RGMA-203ENST00000542321 TOP2BQ02880 1626 aa21.16■□□□□ 0.98
RGMA-203ENST00000542321 GOLGA3Q08378 1498 aa21.13■□□□□ 0.97
RGMA-203ENST00000542321 PRDM2Q13029 1718 aa21.13■□□□□ 0.97
RGMA-203ENST00000542321 SOGA1O94964 1423 aa21.11■□□□□ 0.97
RGMA-203ENST00000542321 FAM9AQ8IZU1 332 aaPredicted RBP21.07■□□□□ 0.96
RGMA-203ENST00000542321 CEP164Q9UPV0 1460 aa21.07■□□□□ 0.96
RGMA-203ENST00000542321 CEP162Q5TB80 1403 aa21.07■□□□□ 0.96
RGMA-203ENST00000542321 CSRNP3Q8WYN3 585 aa21.02■□□□□ 0.96
RGMA-203ENST00000542321 EIF5BO60841 1220 aaKnown RBP21■□□□□ 0.95
RGMA-203ENST00000542321 RUSC2Q8N2Y8 1516 aa20.98■□□□□ 0.95
RGMA-203ENST00000542321 ERICH3Q5RHP9 1530 aa20.97■□□□□ 0.95
RGMA-203ENST00000542321 CFTRP13569 1480 aa20.93■□□□□ 0.94
RGMA-203ENST00000542321 PRXQ9BXM0 1461 aa20.81■□□□□ 0.92
RGMA-203ENST00000542321 CUX1P39880 1505 aa20.79■□□□□ 0.92
RGMA-203ENST00000542321 PPARGC1BQ86YN6 1023 aaKnown RBP20.79■□□□□ 0.92
RGMA-203ENST00000542321 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
RGMA-203ENST00000542321 VPS8Q8N3P4 1428 aa20.75■□□□□ 0.91
RGMA-203ENST00000542321 RAPGEF2Q9Y4G8 1499 aa20.71■□□□□ 0.91
RGMA-203ENST00000542321 CLIP1P30622 1438 aa20.7■□□□□ 0.9
RGMA-203ENST00000542321 NCBP3Q53F19 620 aaKnown RBP20.66■□□□□ 0.9
RGMA-203ENST00000542321 KIF27Q86VH2 1401 aa20.63■□□□□ 0.89
RGMA-203ENST00000542321 CC2D2AQ9P2K1 1620 aa20.61■□□□□ 0.89
RGMA-203ENST00000542321 UBTFP17480 764 aaKnown RBP20.59■□□□□ 0.89
RGMA-203ENST00000542321 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
RGMA-203ENST00000542321 ARAP1Q96P48 1450 aa20.53■□□□□ 0.88
RGMA-203ENST00000542321 PLEKHG5O94827 1062 aa20.53■□□□□ 0.88
RGMA-203ENST00000542321 MAP3K1Q13233 1512 aa20.51■□□□□ 0.87
RGMA-203ENST00000542321 EHMT2Q96KQ7 1210 aa20.51■□□□□ 0.87
RGMA-203ENST00000542321 DNMBPQ6XZF7 1577 aa20.46■□□□□ 0.87
RGMA-203ENST00000542321 SCAF1Q9H7N4 1312 aaKnown RBP20.42■□□□□ 0.86
RGMA-203ENST00000542321 LAMC3Q9Y6N6 1575 aa20.39■□□□□ 0.85
RGMA-203ENST00000542321 WDR97A6NE52 1622 aa20.38■□□□□ 0.85
RGMA-203ENST00000542321 CUX2O14529 1486 aa20.37■□□□□ 0.85
RGMA-203ENST00000542321 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
RGMA-203ENST00000542321 CUL7Q14999 1698 aa20.37■□□□□ 0.85
RGMA-203ENST00000542321 ABCA10Q8WWZ4 1543 aa20.36■□□□□ 0.85
RGMA-203ENST00000542321 ARHGAP35Q9NRY4 1499 aa20.35■□□□□ 0.85
RGMA-203ENST00000542321 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
RGMA-203ENST00000542321 IGF1RP08069 1367 aa20.35■□□□□ 0.85
RGMA-203ENST00000542321 RRBP1Q9P2E9 1410 aaKnown RBP20.35■□□□□ 0.85
RGMA-203ENST00000542321 FANCD2Q9BXW9 1451 aa20.33■□□□□ 0.85
RGMA-203ENST00000542321 CCER1Q8TC90 406 aaPredicted RBP20.33■□□□□ 0.85
RGMA-203ENST00000542321 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
RGMA-203ENST00000542321 CFAP43Q8NDM7 1665 aa20.28■□□□□ 0.84
RGMA-203ENST00000542321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.28■□□□□ 0.84
RGMA-203ENST00000542321 EFCAB5A4FU69 1503 aa20.27■□□□□ 0.84
RGMA-203ENST00000542321 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms