RNA–Protein interactions for RNA: ENST00000541945.1

TPRN-204, Transcript of taperin, humanhuman

TSL 4

Gene TPRN, Length 130 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRN-204ENST00000541945 AEBP2Q6ZN18 517 aaPredicted RBP22.8■■□□□ 1.24
TPRN-204ENST00000541945 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
TPRN-204ENST00000541945 SENP3Q9H4L4 574 aaPredicted RBP19.53■□□□□ 0.72
TPRN-204ENST00000541945 PHF23Q9BUL5 403 aaPredicted RBP19.21■□□□□ 0.67
TPRN-204ENST00000541945 FOXD1Q16676 465 aa18.18■□□□□ 0.5
TPRN-204ENST00000541945 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
TPRN-204ENST00000541945 MSH5O43196 834 aa17.13■□□□□ 0.33
TPRN-204ENST00000541945 PIAS4Q8N2W9 510 aaPredicted RBP16.95■□□□□ 0.3
TPRN-204ENST00000541945 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
TPRN-204ENST00000541945 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
TPRN-204ENST00000541945 ADRA2BP18089 450 aa16.77■□□□□ 0.28
TPRN-204ENST00000541945 DMRT2Q9Y5R5 561 aa15.46■□□□□ 0.07
TPRN-204ENST00000541945 MAPK8IP2Q13387 824 aaPredicted RBP15.44■□□□□ 0.06
TPRN-204ENST00000541945 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
TPRN-204ENST00000541945 PPP4R3CPQ6ZMV5 832 aa14.98□□□□□ -0.01
TPRN-204ENST00000541945 HOXD11P31277 338 aaPredicted RBP14.84□□□□□ -0.03
TPRN-204ENST00000541945 CNKSR2Q8WXI2 1034 aa14.76□□□□□ -0.05
TPRN-204ENST00000541945 DCAF8L1A6NGE4 600 aa14.74□□□□□ -0.05
TPRN-204ENST00000541945 CACNB1Q02641 598 aaPredicted RBP14.74□□□□□ -0.05
TPRN-204ENST00000541945 RNF216Q9NWF9 866 aaPredicted RBP14.69□□□□□ -0.06
TPRN-204ENST00000541945 RNF39Q9H2S5 420 aa14.58□□□□□ -0.08
TPRN-204ENST00000541945 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
TPRN-204ENST00000541945 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
TPRN-204ENST00000541945 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
TPRN-204ENST00000541945 NPM3O75607 178 aaKnown RBP14.15□□□□□ -0.14
TPRN-204ENST00000541945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.08□□□□□ -0.16
TPRN-204ENST00000541945 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
TPRN-204ENST00000541945 KCNA4P22459 653 aa13.71□□□□□ -0.21
TPRN-204ENST00000541945 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
TPRN-204ENST00000541945 CAPN15O75808 1086 aa13.59□□□□□ -0.23
TPRN-204ENST00000541945 DSG3P32926 999 aa13.59□□□□□ -0.23
TPRN-204ENST00000541945 SLC4A2P04920 1241 aa13.55□□□□□ -0.24
TPRN-204ENST00000541945 APLP2Q06481 763 aa13.45□□□□□ -0.26
TPRN-204ENST00000541945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
TPRN-204ENST00000541945 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
TPRN-204ENST00000541945 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
TPRN-204ENST00000541945 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
TPRN-204ENST00000541945 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
TPRN-204ENST00000541945 POTEHQ6S545 545 aa13.25□□□□□ -0.29
TPRN-204ENST00000541945 ABCB7O75027 752 aa13.24□□□□□ -0.29
TPRN-204ENST00000541945 MYCNP04198 464 aaPredicted RBP13.12□□□□□ -0.31
TPRN-204ENST00000541945 RBM42Q9BTD8 480 aaKnown RBP13.01□□□□□ -0.33
TPRN-204ENST00000541945 POLA2Q14181 598 aa12.94□□□□□ -0.34
TPRN-204ENST00000541945 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
TPRN-204ENST00000541945 FOXD4L1Q9NU39 408 aa12.89□□□□□ -0.35
TPRN-204ENST00000541945 ATF5Q9Y2D1 282 aaPredicted RBP12.77□□□□□ -0.37
TPRN-204ENST00000541945 CHRDL2Q6WN34 429 aa12.75□□□□□ -0.37
TPRN-204ENST00000541945 ZBTB12Q9Y330 459 aaPredicted RBP12.75□□□□□ -0.37
TPRN-204ENST00000541945 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
TPRN-204ENST00000541945 ZBTB22O15209 634 aa12.64□□□□□ -0.39
TPRN-204ENST00000541945 ATXN8OSP0DMR3 200 aa12.55□□□□□ -0.4
TPRN-204ENST00000541945 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
TPRN-204ENST00000541945 REM2Q8IYK8 340 aaPredicted RBP12.51□□□□□ -0.41
TPRN-204ENST00000541945 PIP4P2Q8N4L2 257 aa12.4□□□□□ -0.42
TPRN-204ENST00000541945 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
TPRN-204ENST00000541945 SP7Q8TDD2 431 aaPredicted RBP12.36□□□□□ -0.43
TPRN-204ENST00000541945 FXR2P51116 673 aaKnown RBP eCLIP12.33□□□□□ -0.44
TPRN-204ENST00000541945 FBLN2P98095 1184 aa12.33□□□□□ -0.44
TPRN-204ENST00000541945 SPDYE2BA6NHP3 402 aa12.32□□□□□ -0.44
TPRN-204ENST00000541945 SPDYE6P0CI01 402 aa12.32□□□□□ -0.44
TPRN-204ENST00000541945 SPDYE2Q495Y8 402 aa12.32□□□□□ -0.44
TPRN-204ENST00000541945 HAX1O00165 279 aa12.19□□□□□ -0.46
TPRN-204ENST00000541945 MKRN4PQ13434 485 aaPredicted RBP12.19□□□□□ -0.46
TPRN-204ENST00000541945 SSUH2Q9Y2M2 353 aa12.15□□□□□ -0.46
TPRN-204ENST00000541945 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
TPRN-204ENST00000541945 ZNF692Q9BU19 519 aaPredicted RBP12.1□□□□□ -0.47
TPRN-204ENST00000541945 CSRNP3Q8WYN3 585 aa12.07□□□□□ -0.48
TPRN-204ENST00000541945 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
TPRN-204ENST00000541945 PRKAR2AP13861 404 aaKnown RBP12.05□□□□□ -0.48
TPRN-204ENST00000541945 EVX2Q03828 476 aa12.01□□□□□ -0.49
TPRN-204ENST00000541945 C19orf67A6NJJ6 358 aa11.94□□□□□ -0.5
TPRN-204ENST00000541945 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
TPRN-204ENST00000541945 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
TPRN-204ENST00000541945 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
TPRN-204ENST00000541945 CHADLQ6NUI6 762 aa11.83□□□□□ -0.52
TPRN-204ENST00000541945 GABBR2O75899 941 aa11.77□□□□□ -0.53
TPRN-204ENST00000541945 FARP1Q9Y4F1 1045 aaPredicted RBP11.7□□□□□ -0.54
TPRN-204ENST00000541945 CD44P16070 742 aaKnown RBP11.66□□□□□ -0.54
TPRN-204ENST00000541945 CLCN6P51797 869 aa11.63□□□□□ -0.55
TPRN-204ENST00000541945 STAG3Q9UJ98 1225 aa11.61□□□□□ -0.55
TPRN-204ENST00000541945 LHX8Q68G74 356 aa11.57□□□□□ -0.56
TPRN-204ENST00000541945 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
TPRN-204ENST00000541945 SPDYE4A6NLX3 237 aa11.54□□□□□ -0.56
TPRN-204ENST00000541945 POTEIP0CG38 1075 aa11.52□□□□□ -0.57
TPRN-204ENST00000541945 ZNF579Q8NAF0 562 aaKnown RBP11.51□□□□□ -0.57
TPRN-204ENST00000541945 ZRANB1Q9UGI0 708 aa11.46□□□□□ -0.57
TPRN-204ENST00000541945 DCBLD2Q96PD2 775 aa11.42□□□□□ -0.58
TPRN-204ENST00000541945 PAK3O75914 559 aaPredicted RBP11.37□□□□□ -0.59
TPRN-204ENST00000541945 NPM1P06748 294 aaKnown RBP eCLIP11.35□□□□□ -0.59
TPRN-204ENST00000541945 GALR2O43603 387 aaPredicted RBP11.34□□□□□ -0.59
TPRN-204ENST00000541945 MNX1P50219 401 aaPredicted RBP11.34□□□□□ -0.59
TPRN-204ENST00000541945 PROM2Q8N271 834 aa11.3□□□□□ -0.6
TPRN-204ENST00000541945 PHF12Q96QT6 1004 aa11.27□□□□□ -0.61
TPRN-204ENST00000541945 MS4A3Q96HJ5 214 aa11.14□□□□□ -0.63
TPRN-204ENST00000541945 ASTLQ6HA08 431 aaPredicted RBP11.13□□□□□ -0.63
TPRN-204ENST00000541945 OTUD5Q96G74 571 aa11.13□□□□□ -0.63
TPRN-204ENST00000541945 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
TPRN-204ENST00000541945 PELP1Q8IZL8 1130 aaKnown RBP11.12□□□□□ -0.63
TPRN-204ENST00000541945 CCDC61Q9Y6R9 512 aa11.09□□□□□ -0.63
TPRN-204ENST00000541945 ATMINO43313 823 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms