RNA–Protein interactions for RNA: ENST00000541536.5

SOX5-212, Transcript of SRY-box 5, humanhuman

TSL 2 BASIC

Gene SOX5, Length 2,365 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-212ENST00000541536 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.48□□□□□ -0.734e-6■■■■■ 72.1
SOX5-212ENST00000541536 RPS3P23396 243 aaKnown RBP eCLIP9.47□□□□□ -0.895e-10■■■■■ 68.3
SOX5-212ENST00000541536 ILF3Q12906 894 aaKnown RBP eCLIP8.88□□□□□ -0.993e-10■■■■■ 31.7
SOX5-212ENST00000541536 PTBP1P26599 531 aaKnown RBP eCLIP8.89□□□□□ -0.995e-10■■■■■ 31.4
SOX5-212ENST00000541536 SRSF9Q13242 221 aaKnown RBP eCLIP7.05□□□□□ -1.289e-9■■■■■ 30
SOX5-212ENST00000541536 QKIQ96PU8 341 aaKnown RBP eCLIP9.99□□□□□ -0.814e-7■■■■■ 28.3
SOX5-212ENST00000541536 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.51□□□□□ -0.738e-9■■■■□ 26.1
SOX5-212ENST00000541536 TIAL1Q01085 375 aaKnown RBP eCLIP9.72□□□□□ -0.853e-7■■■■□ 25.7
SOX5-212ENST00000541536 U2AF2P26368 475 aaKnown RBP eCLIP11.19□□□□□ -0.621e-7■■■■□ 24.3
SOX5-212ENST00000541536 SRSF7Q16629 238 aaKnown RBP eCLIP8.23□□□□□ -1.091e-6■■■■□ 21.6
SOX5-212ENST00000541536 PCBP2Q15366 365 aaKnown RBP eCLIP9.51□□□□□ -0.896e-7■■■■□ 21.3
SOX5-212ENST00000541536 CSTF2P33240 577 aaKnown RBP eCLIP9.12□□□□□ -0.951e-6■■■■□ 21.1
SOX5-212ENST00000541536 DKC1O60832 514 aaKnown RBP eCLIP10.26□□□□□ -0.777e-7■■■■□ 20.4
SOX5-212ENST00000541536 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.17□□□□□ -1.269e-7■■■■□ 20.3
SOX5-212ENST00000541536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.2□□□□□ -0.37e-7■■■□□ 18.2
SOX5-212ENST00000541536 HNRNPLP14866 589 aaKnown RBP eCLIP9.76□□□□□ -0.859e-7■■■□□ 18
SOX5-212ENST00000541536 HNRNPMP52272 730 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■■□□ 17.4
SOX5-212ENST00000541536 MATR3P43243 847 aaKnown RBP eCLIP10.66□□□□□ -0.78e-7■■■□□ 17.3
SOX5-212ENST00000541536 KHSRPQ92945 711 aaKnown RBP eCLIP10.09□□□□□ -0.791e-6■■■□□ 15.9
SOX5-212ENST00000541536 AQRO60306 1485 aaKnown RBP eCLIP14.04□□□□□ -0.169e-10■■■□□ 15.5
SOX5-212ENST00000541536 GTF2F1P35269 517 aaKnown RBP eCLIP11.27□□□□□ -0.613e-6■■■□□ 14.9
SOX5-212ENST00000541536 HNRNPCP07910 306 aaKnown RBP eCLIP9.3□□□□□ -0.922e-6■■□□□ 13.7
SOX5-212ENST00000541536 U2AF1Q01081 240 aaKnown RBP eCLIP12.5□□□□□ -0.414e-7■■□□□ 12.5
SOX5-212ENST00000541536 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.38□□□□□ -0.432e-6■■□□□ 12.5
SOX5-212ENST00000541536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.56□□□□□ -0.561e-7■■□□□ 12.3
SOX5-212ENST00000541536 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.55□□□□□ -0.726e-8■■□□□ 11.7
SOX5-212ENST00000541536 PRPF4O43172 522 aaKnown RBP eCLIP10.14□□□□□ -0.796e-6■■□□□ 11.6
SOX5-212ENST00000541536 SFPQP23246 707 aaKnown RBP eCLIP11.09□□□□□ -0.632e-6■□□□□ 11
SOX5-212ENST00000541536 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.83□□□□□ -11e-8■□□□□ 9.3
SOX5-212ENST00000541536 EIF3HO15372 352 aaKnown RBP eCLIP10.5□□□□□ -0.735e-6■□□□□ 8.9
SOX5-212ENST00000541536 PPIGQ13427 754 aaKnown RBP eCLIP9.26□□□□□ -0.934e-7■□□□□ 8.9
SOX5-212ENST00000541536 AGGF1Q8N302 714 aaeCLIP10.12□□□□□ -0.799e-8■□□□□ 8.4
Retrieved 32 of 32 RNA–protein pairs in 8.5 ms