RNA–Protein interactions for RNA: ENST00000541399.1

NCAPD2-210, Transcript of non-SMC condensin I complex subunit D2, humanhuman

TSL 5

Gene NCAPD2, Length 584 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD2-210ENST00000541399 DKC1O60832 514 aaKnown RBP eCLIP7.57□□□□□ -1.21e-323■■■■■ 203.1
NCAPD2-210ENST00000541399 NOLC1Q14978 699 aaKnown RBP eCLIP7.35□□□□□ -1.231e-259■■■■■ 172.5
NCAPD2-210ENST00000541399 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.7□□□□□ -1.343e-34■■■■■ 85.1
NCAPD2-210ENST00000541399 SMNDC1O75940 238 aaKnown RBP eCLIP6.32□□□□□ -1.49e-64■■■■■ 82.8
NCAPD2-210ENST00000541399 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.47□□□□□ -1.533e-14■■■■■ 74.1
NCAPD2-210ENST00000541399 SF3B1O75533 1304 aaKnown RBP eCLIP7.27□□□□□ -1.253e-6■■■■■ 68.8
NCAPD2-210ENST00000541399 NIPBLQ6KC79 2804 aaeCLIP5.52□□□□□ -1.534e-37■■■■■ 51.6
NCAPD2-210ENST00000541399 PTBP1P26599 531 aaKnown RBP eCLIP5.53□□□□□ -1.521e-68■■■■■ 51.4
NCAPD2-210ENST00000541399 SF3A3Q12874 501 aaKnown RBP eCLIP6.13□□□□□ -1.433e-69■■■■■ 39.2
NCAPD2-210ENST00000541399 QKIQ96PU8 341 aaKnown RBP eCLIP6.82□□□□□ -1.323e-8■■■■■ 31
NCAPD2-210ENST00000541399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.13□□□□□ -1.271e-6■■■■■ 29.7
NCAPD2-210ENST00000541399 SF3B4Q15427 424 aaKnown RBP eCLIP6.08□□□□□ -1.441e-323■■■■□ 26
NCAPD2-210ENST00000541399 KHSRPQ92945 711 aaKnown RBP eCLIP8.55□□□□□ -1.041e-7■■■■□ 23.7
NCAPD2-210ENST00000541399 AQRO60306 1485 aaKnown RBP eCLIP11.51□□□□□ -0.571e-6■■■■□ 23.7
NCAPD2-210ENST00000541399 NIP7Q9Y221 180 aaKnown RBP eCLIP8.61□□□□□ -1.032e-14■■■■□ 21
NCAPD2-210ENST00000541399 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.22□□□□□ -1.258e-55■■■■□ 20.4
NCAPD2-210ENST00000541399 ILF3Q12906 894 aaKnown RBP eCLIP6.62□□□□□ -1.355e-6■■■■□ 19.8
NCAPD2-210ENST00000541399 AATFQ9NY61 560 aaKnown RBP eCLIP8.12□□□□□ -1.111e-323■■■■□ 19.5
NCAPD2-210ENST00000541399 WDR43Q15061 677 aaKnown RBP eCLIP8.93□□□□□ -0.984e-33■■■□□ 18.2
NCAPD2-210ENST00000541399 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.98□□□□□ -1.294e-83■■■□□ 17.6
NCAPD2-210ENST00000541399 SSBP05455 408 aaKnown RBP eCLIP7.41□□□□□ -1.229e-10■■■□□ 17.5
NCAPD2-210ENST00000541399 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.46□□□□□ -1.222e-18■■■□□ 17.2
NCAPD2-210ENST00000541399 G3BP1Q13283 466 aaKnown RBP eCLIP8.34□□□□□ -1.074e-6■■■□□ 16.8
NCAPD2-210ENST00000541399 RBM15Q96T37 977 aaKnown RBP eCLIP6.76□□□□□ -1.333e-8■■■□□ 16.4
NCAPD2-210ENST00000541399 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.48□□□□□ -1.376e-30■■■□□ 16.2
NCAPD2-210ENST00000541399 BCCIPQ9P287 314 aaKnown RBP eCLIP6.8□□□□□ -1.321e-323■■■□□ 16
NCAPD2-210ENST00000541399 EFTUD2Q15029 972 aaKnown RBP eCLIP6.51□□□□□ -1.371e-5■■■□□ 15.7
NCAPD2-210ENST00000541399 RBM22Q9NW64 420 aaKnown RBP eCLIP6.81□□□□□ -1.324e-42■■■□□ 15.5
NCAPD2-210ENST00000541399 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.39□□□□□ -1.392e-6■■■□□ 15.1
NCAPD2-210ENST00000541399 DDX3XO00571 662 aaKnown RBP eCLIP7.05□□□□□ -1.283e-9■■□□□ 14.4
NCAPD2-210ENST00000541399 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.98□□□□□ -1.293e-29■■□□□ 13.6
NCAPD2-210ENST00000541399 FMR1Q06787 632 aaKnown RBP eCLIP8.11□□□□□ -1.111e-6■■□□□ 13.4
NCAPD2-210ENST00000541399 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.13□□□□□ -1.279e-40■■□□□ 13.1
NCAPD2-210ENST00000541399 AGGF1Q8N302 714 aaeCLIP6.68□□□□□ -1.343e-51■■□□□ 13.1
NCAPD2-210ENST00000541399 LSM11P83369 360 aaKnown RBP eCLIP8.26□□□□□ -1.095e-53■■□□□ 12.9
NCAPD2-210ENST00000541399 PPIGQ13427 754 aaKnown RBP eCLIP7.5□□□□□ -1.211e-6■■□□□ 12.8
NCAPD2-210ENST00000541399 AARSP49588 968 aaKnown RBP eCLIP7.31□□□□□ -1.243e-56■■□□□ 12.7
NCAPD2-210ENST00000541399 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.15□□□□□ -1.12e-6■□□□□ 11.3
NCAPD2-210ENST00000541399 U2AF2P26368 475 aaKnown RBP eCLIP7.69□□□□□ -1.183e-11■□□□□ 11.2
NCAPD2-210ENST00000541399 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.22□□□□□ -0.931e-6■□□□□ 10.9
NCAPD2-210ENST00000541399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.42□□□□□ -0.746e-55■□□□□ 10.7
NCAPD2-210ENST00000541399 RBFOX2O43251 390 aaKnown RBP eCLIP5.35□□□□□ -1.556e-45■□□□□ 10.7
NCAPD2-210ENST00000541399 U2AF1Q01081 240 aaKnown RBP eCLIP8.99□□□□□ -0.977e-11■□□□□ 10.7
NCAPD2-210ENST00000541399 SAFBQ15424 915 aaKnown RBP eCLIP7.66□□□□□ -1.186e-6■□□□□ 10.6
NCAPD2-210ENST00000541399 TROVE2P10155 538 aaKnown RBP eCLIP6.31□□□□□ -1.42e-51■□□□□ 10.4
NCAPD2-210ENST00000541399 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.56□□□□□ -1.363e-15■□□□□ 10.1
NCAPD2-210ENST00000541399 EIF4G2P78344 907 aaKnown RBP eCLIP9.48□□□□□ -0.891e-11■□□□□ 10
NCAPD2-210ENST00000541399 EIF3HO15372 352 aaKnown RBP eCLIP6.66□□□□□ -1.346e-44■□□□□ 9.7
NCAPD2-210ENST00000541399 YBX3P16989 372 aaKnown RBP eCLIP8.49□□□□□ -1.053e-9■□□□□ 9.6
NCAPD2-210ENST00000541399 UPF1Q92900 1129 aaKnown RBP eCLIP9.02□□□□□ -0.971e-32■□□□□ 9.5
NCAPD2-210ENST00000541399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.97□□□□□ -0.493e-6■□□□□ 8.5
NCAPD2-210ENST00000541399 DDX21Q9NR30 783 aaKnown RBP eCLIP8.72□□□□□ -1.011e-26■□□□□ 8.5
NCAPD2-210ENST00000541399 SLBPQ14493 270 aaKnown RBP eCLIP6.4□□□□□ -1.385e-10■□□□□ 8.4
Retrieved 53 of 53 RNA–protein pairs in 15.7 ms