RNA–Protein interactions for RNA: ENST00000540785.1

CARS2-223, Transcript of cysteinyl-tRNA synthetase 2, mitochondrial, human

TSL 3

Gene CARS2, Length 301 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CARS2-223	ENST00000540785	CHIC1	Q5VXU3	224 aa		9.75	□□□□□ -0.85
CARS2-223	ENST00000540785	AEBP2	Q6ZN18	517 aa	Predicted RBP	9.6	□□□□□ -0.87
CARS2-223	ENST00000540785	PHF23	Q9BUL5	403 aa	Predicted RBP	8.61	□□□□□ -1.03
CARS2-223	ENST00000540785	PLPPR3	Q6T4P5	718 aa		8.11	□□□□□ -1.11
CARS2-223	ENST00000540785	SENP3	Q9H4L4	574 aa	Predicted RBP	8.11	□□□□□ -1.11
CARS2-223	ENST00000540785	ADRA2B	P18089	450 aa		7.59	□□□□□ -1.19
CARS2-223	ENST00000540785	PPP6R1	Q9UPN7	881 aa		7.49	□□□□□ -1.21
CARS2-223	ENST00000540785	FOXD1	Q16676	465 aa		7.47	□□□□□ -1.21
CARS2-223	ENST00000540785	KCNA4	P22459	653 aa		7.46	□□□□□ -1.22
CARS2-223	ENST00000540785	EHMT2	Q96KQ7	1210 aa		7.45	□□□□□ -1.22
CARS2-223	ENST00000540785	PPP4R3CP	Q6ZMV5	832 aa		7.2	□□□□□ -1.26
CARS2-223	ENST00000540785	SLC4A1AP	Q9BWU0	796 aa	Known RBP	7.19	□□□□□ -1.26
CARS2-223	ENST00000540785	PIAS4	Q8N2W9	510 aa	Predicted RBP	7.17	□□□□□ -1.26
CARS2-223	ENST00000540785	NCBP3	Q53F19	620 aa	Known RBP	7.15	□□□□□ -1.26
CARS2-223	ENST00000540785	CSRNP3	Q8WYN3	585 aa		7.13	□□□□□ -1.27
CARS2-223	ENST00000540785	NPM3	O75607	178 aa	Known RBP	7	□□□□□ -1.29
CARS2-223	ENST00000540785	CNKSR2	Q8WXI2	1034 aa		6.91	□□□□□ -1.3
CARS2-223	ENST00000540785	SCAF1	Q9H7N4	1312 aa	Known RBP	6.9	□□□□□ -1.3
CARS2-223	ENST00000540785	ZBTB22	O15209	634 aa		6.83	□□□□□ -1.32
CARS2-223	ENST00000540785	MSH5	O43196	834 aa		6.75	□□□□□ -1.33
CARS2-223	ENST00000540785	FOXD4L1	Q9NU39	408 aa		6.75	□□□□□ -1.33
CARS2-223	ENST00000540785	MAPK8IP2	Q13387	824 aa	Predicted RBP	6.73	□□□□□ -1.33
CARS2-223	ENST00000540785	RNF216	Q9NWF9	866 aa	Predicted RBP	6.66	□□□□□ -1.34
CARS2-223	ENST00000540785	DNAJC5B	Q9UF47	199 aa		6.65	□□□□□ -1.34
CARS2-223	ENST00000540785	AMER1	Q5JTC6	1135 aa	Predicted RBP	6.54	□□□□□ -1.36
CARS2-223	ENST00000540785	SLC24A1	O60721	1099 aa		6.52	□□□□□ -1.37
CARS2-223	ENST00000540785	RTN4	Q9NQC3	1192 aa	Known RBP	6.52	□□□□□ -1.37
CARS2-223	ENST00000540785	SLC4A2	P04920	1241 aa		6.51	□□□□□ -1.37
CARS2-223	ENST00000540785	HOXD11	P31277	338 aa	Predicted RBP	6.51	□□□□□ -1.37
CARS2-223	ENST00000540785	DMRT2	Q9Y5R5	561 aa		6.51	□□□□□ -1.37
CARS2-223	ENST00000540785	MYCN	P04198	464 aa	Predicted RBP	6.46	□□□□□ -1.38
CARS2-223	ENST00000540785	ATXN8OS	P0DMR3	200 aa		6.46	□□□□□ -1.38
CARS2-223	ENST00000540785	FKBP8	Q14318	412 aa		6.46	□□□□□ -1.38
CARS2-223	ENST00000540785	DCAF8L1	A6NGE4	600 aa		6.32	□□□□□ -1.4
CARS2-223	ENST00000540785	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	6.3	□□□□□ -1.4
CARS2-223	ENST00000540785	ATF5	Q9Y2D1	282 aa	Predicted RBP	6.26	□□□□□ -1.41
CARS2-223	ENST00000540785	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	6.25	□□□□□ -1.41
CARS2-223	ENST00000540785	HNRNPUL2	Q1KMD3	747 aa	Known RBP	6.25	□□□□□ -1.41
CARS2-223	ENST00000540785	SAMD1	Q6SPF0	538 aa	Predicted RBP	6.24	□□□□□ -1.41
CARS2-223	ENST00000540785		U3KPZ7	1027 aa	Predicted RBP	6.17	□□□□□ -1.42
CARS2-223	ENST00000540785	ZNF219	Q9P2Y4	722 aa	Predicted RBP	6.13	□□□□□ -1.43
CARS2-223	ENST00000540785	FBXO3	Q9UK99	471 aa		6.13	□□□□□ -1.43
CARS2-223	ENST00000540785	APLP2	Q06481	763 aa		6.11	□□□□□ -1.43
CARS2-223	ENST00000540785	SPDYE4	A6NLX3	237 aa		6.08	□□□□□ -1.44
CARS2-223	ENST00000540785	DCAF8L2	P0C7V8	631 aa		6.03	□□□□□ -1.44
CARS2-223	ENST00000540785	FBLN2	P98095	1184 aa		6.02	□□□□□ -1.45
CARS2-223	ENST00000540785	VASP	P50552	380 aa	Predicted RBP	6.01	□□□□□ -1.45
CARS2-223	ENST00000540785	PLCB2	Q00722	1185 aa		6.01	□□□□□ -1.45
CARS2-223	ENST00000540785	HAP1	P54257	671 aa	Predicted RBP	5.99	□□□□□ -1.45
CARS2-223	ENST00000540785	MKRN4P	Q13434	485 aa	Predicted RBP	5.99	□□□□□ -1.45
CARS2-223	ENST00000540785	TRH	P20396	242 aa	Predicted RBP	5.98	□□□□□ -1.45
CARS2-223	ENST00000540785	PROM2	Q8N271	834 aa		5.96	□□□□□ -1.46
CARS2-223	ENST00000540785	IFNLR1	Q8IU57	520 aa	Predicted RBP	5.95	□□□□□ -1.46
CARS2-223	ENST00000540785	POLA2	Q14181	598 aa		5.94	□□□□□ -1.46
CARS2-223	ENST00000540785	CAPN15	O75808	1086 aa		5.91	□□□□□ -1.46
CARS2-223	ENST00000540785	SPINK5	Q9NQ38	1064 aa	Predicted RBP	5.91	□□□□□ -1.46
CARS2-223	ENST00000540785	KLHL34	Q8N239	644 aa		5.9	□□□□□ -1.46
CARS2-223	ENST00000540785	PKD2	Q13563	968 aa		5.88	□□□□□ -1.47
CARS2-223	ENST00000540785	BCAN	Q96GW7	911 aa		5.88	□□□□□ -1.47
CARS2-223	ENST00000540785	VSIG10	Q8N0Z9	540 aa		5.86	□□□□□ -1.47
CARS2-223	ENST00000540785	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	5.86	□□□□□ -1.47
CARS2-223	ENST00000540785	SPOCK2	Q92563	424 aa		5.85	□□□□□ -1.47
CARS2-223	ENST00000540785	ZBTB12	Q9Y330	459 aa	Predicted RBP	5.85	□□□□□ -1.47
CARS2-223	ENST00000540785	ECM2	O94769	699 aa	Predicted RBP	5.84	□□□□□ -1.47
CARS2-223	ENST00000540785	ABCB7	O75027	752 aa		5.83	□□□□□ -1.48
CARS2-223	ENST00000540785	PRKCSH	P14314	528 aa	Predicted RBP	5.82	□□□□□ -1.48
CARS2-223	ENST00000540785	BBX	Q8WY36	941 aa	Predicted RBP	5.82	□□□□□ -1.48
CARS2-223	ENST00000540785	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	5.81	□□□□□ -1.48
CARS2-223	ENST00000540785	PLCD3	Q8N3E9	789 aa		5.81	□□□□□ -1.48
CARS2-223	ENST00000540785	CFAP44	Q96MT7	982 aa		5.81	□□□□□ -1.48
CARS2-223	ENST00000540785	ZNF692	Q9BU19	519 aa	Predicted RBP	5.8	□□□□□ -1.48
CARS2-223	ENST00000540785	RNF39	Q9H2S5	420 aa		5.8	□□□□□ -1.48
CARS2-223	ENST00000540785	STAG3	Q9UJ98	1225 aa		5.8	□□□□□ -1.48
CARS2-223	ENST00000540785	TAOK2	Q9UL54	1235 aa		5.79	□□□□□ -1.48
CARS2-223	ENST00000540785	NPM1	P06748	294 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
CARS2-223	ENST00000540785	C1QBP	Q07021	282 aa	Known RBP	5.77	□□□□□ -1.49
CARS2-223	ENST00000540785	MIER1	Q8N108	512 aa		5.77	□□□□□ -1.49
CARS2-223	ENST00000540785	SPRYD3	Q8NCJ5	442 aa		5.75	□□□□□ -1.49
CARS2-223	ENST00000540785	KDM2A	Q9Y2K7	1162 aa		5.75	□□□□□ -1.49
CARS2-223	ENST00000540785	RGL2	O15211	777 aa		5.74	□□□□□ -1.49
CARS2-223	ENST00000540785	TPRN	Q4KMQ1	711 aa		5.73	□□□□□ -1.49
CARS2-223	ENST00000540785	CIZ1	Q9ULV3	898 aa	Predicted RBP	5.73	□□□□□ -1.49
CARS2-223	ENST00000540785	SPDYE2B	A6NHP3	402 aa		5.72	□□□□□ -1.49
CARS2-223	ENST00000540785	PLEKHG5	O94827	1062 aa		5.72	□□□□□ -1.49
CARS2-223	ENST00000540785	SPDYE6	P0CI01	402 aa		5.72	□□□□□ -1.49
CARS2-223	ENST00000540785	SPDYE2	Q495Y8	402 aa		5.72	□□□□□ -1.49
CARS2-223	ENST00000540785	PABPN1	Q86U42	306 aa	Known RBP eCLIP	5.72	□□□□□ -1.49
CARS2-223	ENST00000540785	CHGA	P10645	457 aa	Known RBP	5.71	□□□□□ -1.5
CARS2-223	ENST00000540785	OSCAR	Q8IYS5	282 aa		5.71	□□□□□ -1.5
CARS2-223	ENST00000540785	TSHZ2	Q9NRE2	1034 aa		5.7	□□□□□ -1.5
CARS2-223	ENST00000540785	ZBTB47	Q9UFB7	747 aa	Predicted RBP	5.68	□□□□□ -1.5
CARS2-223	ENST00000540785	SSUH2	Q9Y2M2	353 aa		5.68	□□□□□ -1.5
CARS2-223	ENST00000540785	DSG3	P32926	999 aa		5.66	□□□□□ -1.5
CARS2-223	ENST00000540785	TRIM41	Q8WV44	630 aa		5.63	□□□□□ -1.51
CARS2-223	ENST00000540785	NBR1	Q14596	966 aa		5.62	□□□□□ -1.51
CARS2-223	ENST00000540785	GSE1	Q14687	1217 aa		5.59	□□□□□ -1.51
CARS2-223	ENST00000540785	DCAF8	Q5TAQ9	597 aa		5.58	□□□□□ -1.52
CARS2-223	ENST00000540785	HS6ST3	Q8IZP7	471 aa		5.58	□□□□□ -1.52
CARS2-223	ENST00000540785	RIOK3	O14730	519 aa	Known RBP	5.53	□□□□□ -1.52
CARS2-223	ENST00000540785	DNAJC5	Q9H3Z4	198 aa		5.53	□□□□□ -1.52

Retrieved 100 of 20,778 RNA–protein pairs in 294.9 ms