RNA–Protein interactions for RNA: ENST00000540473.5

PRPF19-205, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 5

Gene PRPF19, Length 169 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-205ENST00000540473 PRPF4O43172 522 aaKnown RBP eCLIP6.16□□□□□ -1.422e-26■■■■■ 98.1
PRPF19-205ENST00000540473 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.23□□□□□ -1.252e-18■■■■■ 26.9
PRPF19-205ENST00000540473 PABPC4Q13310 644 aaKnown RBP eCLIP8□□□□□ -1.131e-16■■■■■ 56.6
PRPF19-205ENST00000540473 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.77□□□□□ -1.333e-16■■□□□ 11.9
PRPF19-205ENST00000540473 UPF1Q92900 1129 aaKnown RBP eCLIP9.89□□□□□ -0.838e-15■■■■■ 53.3
PRPF19-205ENST00000540473 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.3□□□□□ -1.081e-14■■■■□ 25
PRPF19-205ENST00000540473 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.88□□□□□ -1.312e-13■□□□□ 9
PRPF19-205ENST00000540473 EFTUD2Q15029 972 aaKnown RBP eCLIP6.16□□□□□ -1.421e-11■■■■■ 35.6
PRPF19-205ENST00000540473 TROVE2P10155 538 aaKnown RBP eCLIP5.51□□□□□ -1.532e-11■□□□□ 8.5
PRPF19-205ENST00000540473 GTF2F1P35269 517 aaKnown RBP eCLIP7.59□□□□□ -1.199e-10■■■■■ 35.5
PRPF19-205ENST00000540473 TIA1P31483 386 aaKnown RBP eCLIP5.97□□□□□ -1.451e-9■□□□□ 10.2
PRPF19-205ENST00000540473 KHSRPQ92945 711 aaKnown RBP eCLIP7.67□□□□□ -1.182e-9■■■■■ 35.1
PRPF19-205ENST00000540473 AQRO60306 1485 aaKnown RBP eCLIP12.23□□□□□ -0.452e-9■■■■□ 22.2
PRPF19-205ENST00000540473 LARP4Q71RC2 724 aaKnown RBP eCLIP5.97□□□□□ -1.454e-9■■■■□ 22.5
PRPF19-205ENST00000540473 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.18□□□□□ -1.424e-9■■■■□ 23
PRPF19-205ENST00000540473 SND1Q7KZF4 910 aaKnown RBP eCLIP6.77□□□□□ -1.335e-9■■■■□ 20.2
PRPF19-205ENST00000540473 DDX6P26196 483 aaKnown RBP eCLIP7.03□□□□□ -1.287e-9■■■■■ 64.7
PRPF19-205ENST00000540473 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.09□□□□□ -1.433e-8■■□□□ 14.4
PRPF19-205ENST00000540473 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.9□□□□□ -1.476e-8■■■■■ 30.9
PRPF19-205ENST00000540473 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.21□□□□□ -1.586e-8■□□□□ 9
PRPF19-205ENST00000540473 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.83□□□□□ -1.167e-8■□□□□ 11.3
PRPF19-205ENST00000540473 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.93□□□□□ -1.148e-8■■■■□ 25
PRPF19-205ENST00000540473 PPIGQ13427 754 aaKnown RBP eCLIP7.74□□□□□ -1.179e-8■■■□□ 15.9
PRPF19-205ENST00000540473 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.42□□□□□ -1.389e-8■□□□□ 10.3
PRPF19-205ENST00000540473 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.21□□□□□ -1.421e-7■□□□□ 8.4
PRPF19-205ENST00000540473 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.25□□□□□ -1.252e-7■■■■■ 41.5
PRPF19-205ENST00000540473 PCBP2Q15366 365 aaKnown RBP eCLIP6.07□□□□□ -1.443e-7■■■□□ 18.1
PRPF19-205ENST00000540473 RPS3P23396 243 aaKnown RBP eCLIP6.31□□□□□ -1.44e-7■■■□□ 17.7
PRPF19-205ENST00000540473 YBX3P16989 372 aaKnown RBP eCLIP9.16□□□□□ -0.945e-7■■■□□ 16.5
PRPF19-205ENST00000540473 ZC3H11AO75152 810 aaKnown RBP eCLIP7.4□□□□□ -1.227e-7■■□□□ 12.3
PRPF19-205ENST00000540473 SF3B4Q15427 424 aaKnown RBP eCLIP5.89□□□□□ -1.477e-7■■■■□ 20.3
PRPF19-205ENST00000540473 FXR2P51116 673 aaKnown RBP eCLIP7.3□□□□□ -1.248e-7■■■■□ 25.7
PRPF19-205ENST00000540473 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.08□□□□□ -1.281e-6■■■■□ 26.4
PRPF19-205ENST00000540473 SF3B1O75533 1304 aaKnown RBP eCLIP7.26□□□□□ -1.251e-6■■■■■ 122.4
PRPF19-205ENST00000540473 G3BP1Q13283 466 aaKnown RBP eCLIP8.16□□□□□ -1.12e-6■■■■□ 20.4
PRPF19-205ENST00000540473 RBM22Q9NW64 420 aaKnown RBP eCLIP6.58□□□□□ -1.363e-6■■■■■ 29.5
PRPF19-205ENST00000540473 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.49□□□□□ -1.373e-6■□□□□ 8.5
PRPF19-205ENST00000540473 RPS11P62280 158 aaKnown RBP eCLIP5.21□□□□□ -1.584e-6■■■□□ 16
PRPF19-205ENST00000540473 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.01□□□□□ -1.454e-6■■□□□ 13.8
Retrieved 39 of 39 RNA–protein pairs in 9.5 ms