RNA–Protein interactions for RNA: ENST00000540393.6

RAP1GAP2-203, Transcript of RAP1 GTPase activating protein 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RAP1GAP2, Length 3,218 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GAP2-203ENST00000540393 NISCHQ9Y2I1 1504 aa26.18■■□□□ 1.78
RAP1GAP2-203ENST00000540393 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
RAP1GAP2-203ENST00000540393 CCDC180Q9P1Z9 1646 aa22.45■■□□□ 1.18
RAP1GAP2-203ENST00000540393 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
RAP1GAP2-203ENST00000540393 ABCC9O60706 1549 aa22.09■■□□□ 1.13
RAP1GAP2-203ENST00000540393 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
RAP1GAP2-203ENST00000540393 SUPT5HO00267 1087 aaKnown RBP21.34■■□□□ 1.01
RAP1GAP2-203ENST00000540393 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
RAP1GAP2-203ENST00000540393 DCAF1Q9Y4B6 1507 aa21.25■□□□□ 0.99
RAP1GAP2-203ENST00000540393 PABPN1Q86U42 306 aaKnown RBP eCLIP21.1■□□□□ 0.97
RAP1GAP2-203ENST00000540393 NACADO15069 1562 aa21.09■□□□□ 0.97
RAP1GAP2-203ENST00000540393 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
RAP1GAP2-203ENST00000540393 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
RAP1GAP2-203ENST00000540393 CECR2Q9BXF3 1484 aa20.65■□□□□ 0.9
RAP1GAP2-203ENST00000540393 UNC13AQ9UPW8 1703 aa20.58■□□□□ 0.89
RAP1GAP2-203ENST00000540393 RSF1Q96T23 1441 aaPredicted RBP20.45■□□□□ 0.86
RAP1GAP2-203ENST00000540393 BICRAQ9NZM4 1560 aa20.44■□□□□ 0.86
RAP1GAP2-203ENST00000540393 MROH2BQ7Z745 1585 aa20.4■□□□□ 0.86
RAP1GAP2-203ENST00000540393 WIZO95785 1651 aa20.23■□□□□ 0.83
RAP1GAP2-203ENST00000540393 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
RAP1GAP2-203ENST00000540393 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
RAP1GAP2-203ENST00000540393 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
RAP1GAP2-203ENST00000540393 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
RAP1GAP2-203ENST00000540393 EHMT2Q96KQ7 1210 aa19.9■□□□□ 0.78
RAP1GAP2-203ENST00000540393 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.77
RAP1GAP2-203ENST00000540393 FAM9AQ8IZU1 332 aaPredicted RBP19.85■□□□□ 0.77
RAP1GAP2-203ENST00000540393 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
RAP1GAP2-203ENST00000540393 CCDC88BA6NC98 1476 aa19.81■□□□□ 0.76
RAP1GAP2-203ENST00000540393 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
RAP1GAP2-203ENST00000540393 DNAJC5BQ9UF47 199 aa19.8■□□□□ 0.76
RAP1GAP2-203ENST00000540393 TOP2AP11388 1531 aaKnown RBP19.78■□□□□ 0.76
RAP1GAP2-203ENST00000540393 SMARCA2P51531 1590 aa19.71■□□□□ 0.75
RAP1GAP2-203ENST00000540393 CC2D2AQ9P2K1 1620 aa19.68■□□□□ 0.74
RAP1GAP2-203ENST00000540393 LOC105371045A0A1W2PR82 267 aa19.62■□□□□ 0.73
RAP1GAP2-203ENST00000540393 PEG3Q9GZU2 1588 aa19.59■□□□□ 0.73
RAP1GAP2-203ENST00000540393 NCAPD3P42695 1498 aa19.59■□□□□ 0.73
RAP1GAP2-203ENST00000540393 ABCC8Q09428 1581 aa19.55■□□□□ 0.72
RAP1GAP2-203ENST00000540393 HRCP23327 699 aa19.46■□□□□ 0.7
RAP1GAP2-203ENST00000540393 HMGXB3Q12766 1538 aa19.42■□□□□ 0.7
RAP1GAP2-203ENST00000540393 NESP48681 1621 aa19.35■□□□□ 0.69
RAP1GAP2-203ENST00000540393 PCGF6Q9BYE7 350 aa19.32■□□□□ 0.68
RAP1GAP2-203ENST00000540393 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
RAP1GAP2-203ENST00000540393 CADPSQ9ULU8 1353 aa19.27■□□□□ 0.68
RAP1GAP2-203ENST00000540393 SOGA1O94964 1423 aa19.22■□□□□ 0.67
RAP1GAP2-203ENST00000540393 RANGAP1P46060 587 aaPredicted RBP19.22■□□□□ 0.67
RAP1GAP2-203ENST00000540393 CFTRP13569 1480 aa19.2■□□□□ 0.66
RAP1GAP2-203ENST00000540393 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
RAP1GAP2-203ENST00000540393 RUSC2Q8N2Y8 1516 aa19.18■□□□□ 0.66
RAP1GAP2-203ENST00000540393 SYNJ1O43426 1573 aa19.15■□□□□ 0.66
RAP1GAP2-203ENST00000540393 UBTFP17480 764 aaKnown RBP19.1■□□□□ 0.65
RAP1GAP2-203ENST00000540393 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
RAP1GAP2-203ENST00000540393 CSRNP3Q8WYN3 585 aa19.05■□□□□ 0.64
RAP1GAP2-203ENST00000540393 CUX1P39880 1505 aa19.02■□□□□ 0.63
RAP1GAP2-203ENST00000540393 TTBK1Q5TCY1 1321 aaPredicted RBP18.96■□□□□ 0.63
RAP1GAP2-203ENST00000540393 CEP164Q9UPV0 1460 aa18.93■□□□□ 0.62
RAP1GAP2-203ENST00000540393 PDS5BQ9NTI5 1447 aa18.92■□□□□ 0.62
RAP1GAP2-203ENST00000540393 RAD54L2Q9Y4B4 1467 aa18.91■□□□□ 0.62
RAP1GAP2-203ENST00000540393 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
RAP1GAP2-203ENST00000540393 TOP2BQ02880 1626 aa18.89■□□□□ 0.61
RAP1GAP2-203ENST00000540393 FGD5Q6ZNL6 1462 aa18.88■□□□□ 0.61
RAP1GAP2-203ENST00000540393 LAMC3Q9Y6N6 1575 aa18.86■□□□□ 0.61
RAP1GAP2-203ENST00000540393 CUX2O14529 1486 aa18.85■□□□□ 0.61
RAP1GAP2-203ENST00000540393 TDRD9Q8NDG6 1382 aaKnown RBP18.84■□□□□ 0.61
RAP1GAP2-203ENST00000540393 URB2Q14146 1524 aaKnown RBP18.82■□□□□ 0.6
RAP1GAP2-203ENST00000540393 TOPBP1Q92547 1522 aa18.81■□□□□ 0.6
RAP1GAP2-203ENST00000540393 KIF21AQ7Z4S6 1674 aa18.81■□□□□ 0.6
RAP1GAP2-203ENST00000540393 KIF27Q86VH2 1401 aa18.77■□□□□ 0.6
RAP1GAP2-203ENST00000540393 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
RAP1GAP2-203ENST00000540393 BIVM-ERCC5R4GMW8 1640 aa18.75■□□□□ 0.59
RAP1GAP2-203ENST00000540393 RAPGEF2Q9Y4G8 1499 aa18.75■□□□□ 0.59
RAP1GAP2-203ENST00000540393 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
RAP1GAP2-203ENST00000540393 EEA1Q15075 1411 aa18.71■□□□□ 0.58
RAP1GAP2-203ENST00000540393 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
RAP1GAP2-203ENST00000540393 P3H3Q8IVL6 736 aa18.68■□□□□ 0.58
RAP1GAP2-203ENST00000540393 FBLN2P98095 1184 aa18.67■□□□□ 0.58
RAP1GAP2-203ENST00000540393 PELP1Q8IZL8 1130 aaKnown RBP18.67■□□□□ 0.58
RAP1GAP2-203ENST00000540393 IGF1RP08069 1367 aa18.66■□□□□ 0.58
RAP1GAP2-203ENST00000540393 GOLGA3Q08378 1498 aa18.66■□□□□ 0.58
RAP1GAP2-203ENST00000540393 AQRO60306 1485 aaKnown RBP eCLIP18.65■□□□□ 0.58
RAP1GAP2-203ENST00000540393 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.57
RAP1GAP2-203ENST00000540393 CEP162Q5TB80 1403 aa18.64■□□□□ 0.57
RAP1GAP2-203ENST00000540393 MRC2Q9UBG0 1479 aa18.63■□□□□ 0.57
RAP1GAP2-203ENST00000540393 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
RAP1GAP2-203ENST00000540393 TNIKQ9UKE5 1360 aa18.58■□□□□ 0.57
RAP1GAP2-203ENST00000540393 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.57
RAP1GAP2-203ENST00000540393 ZNF608Q9ULD9 1512 aaPredicted RBP18.57■□□□□ 0.56
RAP1GAP2-203ENST00000540393 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.56
RAP1GAP2-203ENST00000540393 CLIP1P30622 1438 aa18.52■□□□□ 0.55
RAP1GAP2-203ENST00000540393 ABCA10Q8WWZ4 1543 aa18.52■□□□□ 0.55
RAP1GAP2-203ENST00000540393 PRXQ9BXM0 1461 aa18.51■□□□□ 0.55
RAP1GAP2-203ENST00000540393 KIF21BO75037 1637 aa18.44■□□□□ 0.54
RAP1GAP2-203ENST00000540393 ARID3CA6NKF2 412 aa18.42■□□□□ 0.54
RAP1GAP2-203ENST00000540393 CHMP7Q8WUX9 453 aaPredicted RBP18.42■□□□□ 0.54
RAP1GAP2-203ENST00000540393 APLP2Q06481 763 aa18.42■□□□□ 0.54
RAP1GAP2-203ENST00000540393 WDR62O43379 1518 aa18.4■□□□□ 0.54
RAP1GAP2-203ENST00000540393 TARBP1Q13395 1621 aaKnown RBP18.39■□□□□ 0.53
RAP1GAP2-203ENST00000540393 THOC2Q8NI27 1593 aaKnown RBP18.37■□□□□ 0.53
RAP1GAP2-203ENST00000540393 IFT140Q96RY7 1462 aa18.36■□□□□ 0.53
RAP1GAP2-203ENST00000540393 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
RAP1GAP2-203ENST00000540393 ERICH3Q5RHP9 1530 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms