RNA–Protein interactions for RNA: ENST00000539856.5

CWC15-202, Transcript of CWC15 spliceosome associated protein homolog, humanhuman

TSL 2

Gene CWC15, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CWC15-202ENST00000539856 AEBP2Q6ZN18 517 aaPredicted RBP26.35■■□□□ 1.81
CWC15-202ENST00000539856 CHIC1Q5VXU3 224 aa25.72■■□□□ 1.71
CWC15-202ENST00000539856 NISCHQ9Y2I1 1504 aa24.58■■□□□ 1.53
CWC15-202ENST00000539856 PHF23Q9BUL5 403 aaPredicted RBP22.57■■□□□ 1.2
CWC15-202ENST00000539856 SENP3Q9H4L4 574 aaPredicted RBP22.45■■□□□ 1.18
CWC15-202ENST00000539856 CCDC180Q9P1Z9 1646 aa21.83■■□□□ 1.08
CWC15-202ENST00000539856 ABCC9O60706 1549 aa21.38■■□□□ 1.01
CWC15-202ENST00000539856 PLPPR3Q6T4P5 718 aa20.9■□□□□ 0.94
CWC15-202ENST00000539856 FOXD1Q16676 465 aa20.8■□□□□ 0.92
CWC15-202ENST00000539856 DCAF8L2P0C7V8 631 aa20.66■□□□□ 0.9
CWC15-202ENST00000539856 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
CWC15-202ENST00000539856 NACADO15069 1562 aa20.55■□□□□ 0.88
CWC15-202ENST00000539856 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
CWC15-202ENST00000539856 MYO15BQ96JP2 1530 aa20.41■□□□□ 0.86
CWC15-202ENST00000539856 DCAF1Q9Y4B6 1507 aa20.32■□□□□ 0.84
CWC15-202ENST00000539856 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
CWC15-202ENST00000539856 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
CWC15-202ENST00000539856 PPP6R1Q9UPN7 881 aa19.95■□□□□ 0.78
CWC15-202ENST00000539856 ADRA2BP18089 450 aa19.94■□□□□ 0.78
CWC15-202ENST00000539856 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
CWC15-202ENST00000539856 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
CWC15-202ENST00000539856 SHROOM4Q9ULL8 1493 aa19.7■□□□□ 0.74
CWC15-202ENST00000539856 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
CWC15-202ENST00000539856 PIAS4Q8N2W9 510 aaPredicted RBP19.62■□□□□ 0.73
CWC15-202ENST00000539856 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
CWC15-202ENST00000539856 CC2D2AQ9P2K1 1620 aa19.33■□□□□ 0.68
CWC15-202ENST00000539856 MSH5O43196 834 aa19.27■□□□□ 0.68
CWC15-202ENST00000539856 CECR2Q9BXF3 1484 aa19.21■□□□□ 0.67
CWC15-202ENST00000539856 SMARCA4P51532 1647 aa19.06■□□□□ 0.64
CWC15-202ENST00000539856 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
CWC15-202ENST00000539856 NCAPD3P42695 1498 aa18.97■□□□□ 0.63
CWC15-202ENST00000539856 ATAD2BQ9ULI0 1458 aa18.97■□□□□ 0.63
CWC15-202ENST00000539856 SMARCA2P51531 1590 aa18.94■□□□□ 0.62
CWC15-202ENST00000539856 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
CWC15-202ENST00000539856 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
CWC15-202ENST00000539856 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
CWC15-202ENST00000539856 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
CWC15-202ENST00000539856 WIZO95785 1651 aa18.74■□□□□ 0.59
CWC15-202ENST00000539856 RSF1Q96T23 1441 aaPredicted RBP18.74■□□□□ 0.59
CWC15-202ENST00000539856 TOP2AP11388 1531 aaKnown RBP18.53■□□□□ 0.56
CWC15-202ENST00000539856 NESP48681 1621 aa18.49■□□□□ 0.55
CWC15-202ENST00000539856 LAMC3Q9Y6N6 1575 aa18.45■□□□□ 0.54
CWC15-202ENST00000539856 ERCC6Q03468 1493 aa18.44■□□□□ 0.54
CWC15-202ENST00000539856 CADPSQ9ULU8 1353 aa18.43■□□□□ 0.54
CWC15-202ENST00000539856 PPP4R3CPQ6ZMV5 832 aa18.38■□□□□ 0.53
CWC15-202ENST00000539856 SUPT5HO00267 1087 aaKnown RBP18.36■□□□□ 0.53
CWC15-202ENST00000539856 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
CWC15-202ENST00000539856 PDS5BQ9NTI5 1447 aa18.36■□□□□ 0.53
CWC15-202ENST00000539856 CCDC88BA6NC98 1476 aa18.34■□□□□ 0.53
CWC15-202ENST00000539856 CFTRP13569 1480 aa18.29■□□□□ 0.52
CWC15-202ENST00000539856 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
CWC15-202ENST00000539856 CUX2O14529 1486 aa18.21■□□□□ 0.51
CWC15-202ENST00000539856 FANCD2Q9BXW9 1451 aa18.19■□□□□ 0.5
CWC15-202ENST00000539856 THOC2Q8NI27 1593 aaKnown RBP18.17■□□□□ 0.5
CWC15-202ENST00000539856 CEP164Q9UPV0 1460 aa18.17■□□□□ 0.5
CWC15-202ENST00000539856 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
CWC15-202ENST00000539856 MRC2Q9UBG0 1479 aa18.14■□□□□ 0.49
CWC15-202ENST00000539856 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
CWC15-202ENST00000539856 WDR62O43379 1518 aa18.05■□□□□ 0.48
CWC15-202ENST00000539856 URB2Q14146 1524 aaKnown RBP17.99■□□□□ 0.47
CWC15-202ENST00000539856 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
CWC15-202ENST00000539856 ABCC8Q09428 1581 aa17.95■□□□□ 0.46
CWC15-202ENST00000539856 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
CWC15-202ENST00000539856 TOPBP1Q92547 1522 aa17.9■□□□□ 0.46
CWC15-202ENST00000539856 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
CWC15-202ENST00000539856 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
CWC15-202ENST00000539856 KCNA4P22459 653 aa17.85■□□□□ 0.45
CWC15-202ENST00000539856 IFT140Q96RY7 1462 aa17.8■□□□□ 0.44
CWC15-202ENST00000539856 CUX1P39880 1505 aa17.75■□□□□ 0.43
CWC15-202ENST00000539856 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
CWC15-202ENST00000539856 SOGA1O94964 1423 aa17.72■□□□□ 0.43
CWC15-202ENST00000539856 FGD5Q6ZNL6 1462 aa17.71■□□□□ 0.43
CWC15-202ENST00000539856 DNAJC5Q9H3Z4 198 aa17.7■□□□□ 0.42
CWC15-202ENST00000539856 ZNF608Q9ULD9 1512 aaPredicted RBP17.69■□□□□ 0.42
CWC15-202ENST00000539856 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
CWC15-202ENST00000539856 WRNQ14191 1432 aaPredicted RBP eCLIP17.68■□□□□ 0.42
CWC15-202ENST00000539856 TARBP1Q13395 1621 aaKnown RBP17.68■□□□□ 0.42
CWC15-202ENST00000539856 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■■■□ 20
CWC15-202ENST00000539856 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
CWC15-202ENST00000539856 NPM3O75607 178 aaKnown RBP17.61■□□□□ 0.41
CWC15-202ENST00000539856 TDRD9Q8NDG6 1382 aaKnown RBP17.61■□□□□ 0.41
CWC15-202ENST00000539856 EIF4G3O43432 1585 aaKnown RBP17.61■□□□□ 0.41
CWC15-202ENST00000539856 BIVM-ERCC5R4GMW8 1640 aa17.61■□□□□ 0.41
CWC15-202ENST00000539856 POTEDQ86YR6 584 aa17.6■□□□□ 0.41
CWC15-202ENST00000539856 SYNJ1O43426 1573 aa17.59■□□□□ 0.41
CWC15-202ENST00000539856 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
CWC15-202ENST00000539856 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
CWC15-202ENST00000539856 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
CWC15-202ENST00000539856 ABCA10Q8WWZ4 1543 aa17.54■□□□□ 0.4
CWC15-202ENST00000539856 GAPVD1Q14C86 1478 aa17.5■□□□□ 0.39
CWC15-202ENST00000539856 HOXD11P31277 338 aaPredicted RBP17.49■□□□□ 0.39
CWC15-202ENST00000539856 GRIN2BQ13224 1484 aa17.49■□□□□ 0.39
CWC15-202ENST00000539856 FBLN2P98095 1184 aa17.48■□□□□ 0.39
CWC15-202ENST00000539856 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
CWC15-202ENST00000539856 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
CWC15-202ENST00000539856 CHMP7Q8WUX9 453 aaPredicted RBP17.43■□□□□ 0.38
CWC15-202ENST00000539856 MAGI1Q96QZ7 1491 aaPredicted RBP17.43■□□□□ 0.38
CWC15-202ENST00000539856 PBRM1Q86U86 1689 aa17.42■□□□□ 0.38
CWC15-202ENST00000539856 CHD1O14646 1710 aa17.4■□□□□ 0.38
CWC15-202ENST00000539856 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms