RNA–Protein interactions for RNA: ENST00000539757.1

AC009533.1-201, humanhuman

BASIC

Gene AC009533.1, Length 3,158 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009533.1-201ENST00000539757 NISCHQ9Y2I1 1504 aa24.82■■□□□ 1.56
AC009533.1-201ENST00000539757 SHROOM4Q9ULL8 1493 aa22.35■■□□□ 1.17
AC009533.1-201ENST00000539757 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
AC009533.1-201ENST00000539757 DCAF8L2P0C7V8 631 aa21.62■■□□□ 1.05
AC009533.1-201ENST00000539757 PCGF6Q9BYE7 350 aa21.24■□□□□ 0.99
AC009533.1-201ENST00000539757 MYO15BQ96JP2 1530 aa21.21■□□□□ 0.99
AC009533.1-201ENST00000539757 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.98
AC009533.1-201ENST00000539757 PPARGC1BQ86YN6 1023 aaKnown RBP21.1■□□□□ 0.97
AC009533.1-201ENST00000539757 HRCP23327 699 aa21.08■□□□□ 0.96
AC009533.1-201ENST00000539757 LOC105371045A0A1W2PR82 267 aa20.97■□□□□ 0.95
AC009533.1-201ENST00000539757 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
AC009533.1-201ENST00000539757 EHMT2Q96KQ7 1210 aa20.73■□□□□ 0.91
AC009533.1-201ENST00000539757 FAM9AQ8IZU1 332 aaPredicted RBP20.54■□□□□ 0.88
AC009533.1-201ENST00000539757 CCDC180Q9P1Z9 1646 aa20.51■□□□□ 0.87
AC009533.1-201ENST00000539757 TRIM26Q12899 539 aaPredicted RBP20.34■□□□□ 0.85
AC009533.1-201ENST00000539757 DCAF1Q9Y4B6 1507 aa20.26■□□□□ 0.83
AC009533.1-201ENST00000539757 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
AC009533.1-201ENST00000539757 TTBK1Q5TCY1 1321 aaPredicted RBP20.06■□□□□ 0.8
AC009533.1-201ENST00000539757 SCRIBQ14160 1630 aa19.99■□□□□ 0.79
AC009533.1-201ENST00000539757 RSF1Q96T23 1441 aaPredicted RBP19.95■□□□□ 0.78
AC009533.1-201ENST00000539757 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.87■□□□□ 0.77
AC009533.1-201ENST00000539757 RB1CC1Q8TDY2 1594 aa19.84■□□□□ 0.77
AC009533.1-201ENST00000539757 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.76
AC009533.1-201ENST00000539757 ZEB1P37275 1124 aaPredicted RBP19.83■□□□□ 0.76
AC009533.1-201ENST00000539757 ABCC9O60706 1549 aa19.81■□□□□ 0.76
AC009533.1-201ENST00000539757 CCER1Q8TC90 406 aaPredicted RBP19.73■□□□□ 0.75
AC009533.1-201ENST00000539757 CECR2Q9BXF3 1484 aa19.69■□□□□ 0.74
AC009533.1-201ENST00000539757 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
AC009533.1-201ENST00000539757 NEUROD1Q13562 356 aa19.51■□□□□ 0.71
AC009533.1-201ENST00000539757 WIZO95785 1651 aa19.43■□□□□ 0.7
AC009533.1-201ENST00000539757 DIEXFQ68CQ4 756 aaKnown RBP19.42■□□□□ 0.7
AC009533.1-201ENST00000539757 YTHDC1Q96MU7 727 aaKnown RBP19.41■□□□□ 0.7
AC009533.1-201ENST00000539757 RANGAP1P46060 587 aaPredicted RBP19.39■□□□□ 0.69
AC009533.1-201ENST00000539757 UBTFP17480 764 aaKnown RBP19.38■□□□□ 0.69
AC009533.1-201ENST00000539757 PELP1Q8IZL8 1130 aaKnown RBP19.38■□□□□ 0.69
AC009533.1-201ENST00000539757 GTF3C3Q9Y5Q9 886 aa19.38■□□□□ 0.69
AC009533.1-201ENST00000539757 ACIN1Q9UKV3 1341 aaKnown RBP19.38■□□□□ 0.69
AC009533.1-201ENST00000539757 ABCC8Q09428 1581 aa19.3■□□□□ 0.68
AC009533.1-201ENST00000539757 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
AC009533.1-201ENST00000539757 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
AC009533.1-201ENST00000539757 SOGA1O94964 1423 aa19.22■□□□□ 0.67
AC009533.1-201ENST00000539757 CENPBP07199 599 aaPredicted RBP19.18■□□□□ 0.66
AC009533.1-201ENST00000539757 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
AC009533.1-201ENST00000539757 CEP162Q5TB80 1403 aa19.16■□□□□ 0.66
AC009533.1-201ENST00000539757 RUSC2Q8N2Y8 1516 aa19.15■□□□□ 0.66
AC009533.1-201ENST00000539757 CSRNP3Q8WYN3 585 aa19.1■□□□□ 0.65
AC009533.1-201ENST00000539757 NACADO15069 1562 aa19.07■□□□□ 0.64
AC009533.1-201ENST00000539757 ZNF316A6NFI3 1004 aaPredicted RBP19.05■□□□□ 0.64
AC009533.1-201ENST00000539757 MIER1Q8N108 512 aa19.03■□□□□ 0.64
AC009533.1-201ENST00000539757 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.63
AC009533.1-201ENST00000539757 TNIKQ9UKE5 1360 aa18.93■□□□□ 0.62
AC009533.1-201ENST00000539757 EIF4G1Q04637 1599 aaKnown RBP18.91■□□□□ 0.62
AC009533.1-201ENST00000539757 APLP2Q06481 763 aa18.9■□□□□ 0.62
AC009533.1-201ENST00000539757 WRNQ14191 1432 aaPredicted RBP eCLIP18.88■□□□□ 0.61
AC009533.1-201ENST00000539757 SMARCA2P51531 1590 aa18.86■□□□□ 0.61
AC009533.1-201ENST00000539757 TOP2AP11388 1531 aaKnown RBP18.85■□□□□ 0.61
AC009533.1-201ENST00000539757 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
AC009533.1-201ENST00000539757 ITGAEP38570 1179 aa18.79■□□□□ 0.6
AC009533.1-201ENST00000539757 GOLGA3Q08378 1498 aa18.77■□□□□ 0.6
AC009533.1-201ENST00000539757 CLIP1P30622 1438 aa18.75■□□□□ 0.59
AC009533.1-201ENST00000539757 RAPGEF2Q9Y4G8 1499 aa18.64■□□□□ 0.57
AC009533.1-201ENST00000539757 EEA1Q15075 1411 aa18.63■□□□□ 0.57
AC009533.1-201ENST00000539757 KANK4Q5T7N3 995 aaPredicted RBP18.62■□□□□ 0.57
AC009533.1-201ENST00000539757 SYNJ1O43426 1573 aa18.6■□□□□ 0.57
AC009533.1-201ENST00000539757 CEP164Q9UPV0 1460 aa18.59■□□□□ 0.57
AC009533.1-201ENST00000539757 VPS8Q8N3P4 1428 aa18.56■□□□□ 0.56
AC009533.1-201ENST00000539757 UNC13AQ9UPW8 1703 aa18.55■□□□□ 0.56
AC009533.1-201ENST00000539757 KCNH8Q96L42 1107 aa18.53■□□□□ 0.56
AC009533.1-201ENST00000539757 BCANQ96GW7 911 aa18.5■□□□□ 0.55
AC009533.1-201ENST00000539757 MYT1Q01538 1121 aa18.48■□□□□ 0.55
AC009533.1-201ENST00000539757 ATP1B4Q9UN42 357 aaPredicted RBP18.46■□□□□ 0.55
AC009533.1-201ENST00000539757 HIRIP3Q9BW71 556 aaPredicted RBP18.45■□□□□ 0.54
AC009533.1-201ENST00000539757 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
AC009533.1-201ENST00000539757 SUPT16HQ9Y5B9 1047 aaKnown RBP18.44■□□□□ 0.54
AC009533.1-201ENST00000539757 KIF21BO75037 1637 aa18.43■□□□□ 0.54
AC009533.1-201ENST00000539757 BAZ1BQ9UIG0 1483 aaKnown RBP18.4■□□□□ 0.54
AC009533.1-201ENST00000539757 P3H3Q8IVL6 736 aa18.38■□□□□ 0.53
AC009533.1-201ENST00000539757 BICRAQ9NZM4 1560 aa18.36■□□□□ 0.53
AC009533.1-201ENST00000539757 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
AC009533.1-201ENST00000539757 DDX10Q13206 875 aaKnown RBP18.32■□□□□ 0.52
AC009533.1-201ENST00000539757 SIN3AQ96ST3 1273 aa18.32■□□□□ 0.52
AC009533.1-201ENST00000539757 FAM50AQ14320 339 aaKnown RBP18.32■□□□□ 0.52
AC009533.1-201ENST00000539757 ARAP1Q96P48 1450 aa18.29■□□□□ 0.52
AC009533.1-201ENST00000539757 TRIM52Q96A61 297 aa18.22■□□□□ 0.51
AC009533.1-201ENST00000539757 TSHZ2Q9NRE2 1034 aa18.22■□□□□ 0.51
AC009533.1-201ENST00000539757 CCNB3Q8WWL7 1395 aa18.21■□□□□ 0.51
AC009533.1-201ENST00000539757 FKBP8Q14318 412 aa18.21■□□□□ 0.51
AC009533.1-201ENST00000539757 RAB3GAP2Q9H2M9 1393 aa18.18■□□□□ 0.5
AC009533.1-201ENST00000539757 CLSPNQ9HAW4 1339 aa18.14■□□□□ 0.49
AC009533.1-201ENST00000539757 PRXQ9BXM0 1461 aa18.14■□□□□ 0.49
AC009533.1-201ENST00000539757 TOP2BQ02880 1626 aa18.13■□□□□ 0.49
AC009533.1-201ENST00000539757 PEG3Q9GZU2 1588 aa18.12■□□□□ 0.49
AC009533.1-201ENST00000539757 KIF27Q86VH2 1401 aa18.11■□□□□ 0.49
AC009533.1-201ENST00000539757 ARHGAP35Q9NRY4 1499 aa18.09■□□□□ 0.49
AC009533.1-201ENST00000539757 CUX1P39880 1505 aa18.08■□□□□ 0.48
AC009533.1-201ENST00000539757 RRBP1Q9P2E9 1410 aaKnown RBP18.07■□□□□ 0.48
AC009533.1-201ENST00000539757 IRX6P78412 446 aaPredicted RBP18.04■□□□□ 0.48
AC009533.1-201ENST00000539757 PHLDB1Q86UU1 1377 aa18.02■□□□□ 0.48
AC009533.1-201ENST00000539757 CUX2O14529 1486 aa18.02■□□□□ 0.48
AC009533.1-201ENST00000539757 WDR97A6NE52 1622 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms