RNA–Protein interactions for RNA: ENST00000539045.1

HMBS-210, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 2

Gene HMBS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-210ENST00000539045 NISCHQ9Y2I1 1504 aa25.41■■□□□ 1.66
HMBS-210ENST00000539045 ABCC9O60706 1549 aa22.97■■□□□ 1.27
HMBS-210ENST00000539045 CCDC180Q9P1Z9 1646 aa22.91■■□□□ 1.26
HMBS-210ENST00000539045 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
HMBS-210ENST00000539045 NACADO15069 1562 aa21.66■■□□□ 1.06
HMBS-210ENST00000539045 DNAJC5BQ9UF47 199 aa21.65■■□□□ 1.06
HMBS-210ENST00000539045 UNC13AQ9UPW8 1703 aa21.42■■□□□ 1.02
HMBS-210ENST00000539045 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.01
HMBS-210ENST00000539045 MYO15BQ96JP2 1530 aa21.33■■□□□ 1
HMBS-210ENST00000539045 PABPN1Q86U42 306 aaKnown RBP eCLIP21.32■■□□□ 1
HMBS-210ENST00000539045 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
HMBS-210ENST00000539045 ZCCHC6Q5VYS8 1495 aaKnown RBP21.04■□□□□ 0.96
HMBS-210ENST00000539045 DCAF1Q9Y4B6 1507 aa21■□□□□ 0.95
HMBS-210ENST00000539045 SHROOM4Q9ULL8 1493 aa20.93■□□□□ 0.94
HMBS-210ENST00000539045 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
HMBS-210ENST00000539045 CC2D2AQ9P2K1 1620 aa20.78■□□□□ 0.92
HMBS-210ENST00000539045 CECR2Q9BXF3 1484 aa20.71■□□□□ 0.91
HMBS-210ENST00000539045 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
HMBS-210ENST00000539045 DNAJC5Q9H3Z4 198 aa19.99■□□□□ 0.79
HMBS-210ENST00000539045 NCAPD3P42695 1498 aa19.98■□□□□ 0.79
HMBS-210ENST00000539045 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.77
HMBS-210ENST00000539045 CUX2O14529 1486 aa19.88■□□□□ 0.77
HMBS-210ENST00000539045 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
HMBS-210ENST00000539045 SMARCA2P51531 1590 aa19.85■□□□□ 0.77
HMBS-210ENST00000539045 HMGXB3Q12766 1538 aa19.84■□□□□ 0.77
HMBS-210ENST00000539045 ERCC6Q03468 1493 aa19.84■□□□□ 0.77
HMBS-210ENST00000539045 BAZ1AQ9NRL2 1556 aaPredicted RBP19.74■□□□□ 0.75
HMBS-210ENST00000539045 NESP48681 1621 aa19.7■□□□□ 0.74
HMBS-210ENST00000539045 PEG3Q9GZU2 1588 aa19.69■□□□□ 0.74
HMBS-210ENST00000539045 BAZ1BQ9UIG0 1483 aaKnown RBP19.68■□□□□ 0.74
HMBS-210ENST00000539045 THOC2Q8NI27 1593 aaKnown RBP19.58■□□□□ 0.73
HMBS-210ENST00000539045 LAMC3Q9Y6N6 1575 aa19.57■□□□□ 0.72
HMBS-210ENST00000539045 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
HMBS-210ENST00000539045 KIF21AQ7Z4S6 1674 aa19.5■□□□□ 0.71
HMBS-210ENST00000539045 PDS5BQ9NTI5 1447 aa19.42■□□□□ 0.7
HMBS-210ENST00000539045 WIZO95785 1651 aa19.35■□□□□ 0.69
HMBS-210ENST00000539045 CADPSQ9ULU8 1353 aa19.34■□□□□ 0.69
HMBS-210ENST00000539045 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
HMBS-210ENST00000539045 WDR62O43379 1518 aa19.26■□□□□ 0.67
HMBS-210ENST00000539045 CEP164Q9UPV0 1460 aa19.17■□□□□ 0.66
HMBS-210ENST00000539045 FANCD2Q9BXW9 1451 aa19.14■□□□□ 0.65
HMBS-210ENST00000539045 CFTRP13569 1480 aa19.11■□□□□ 0.65
HMBS-210ENST00000539045 RSF1Q96T23 1441 aaPredicted RBP19.09■□□□□ 0.65
HMBS-210ENST00000539045 TOP2AP11388 1531 aaKnown RBP19.09■□□□□ 0.65
HMBS-210ENST00000539045 TRIM41Q8WV44 630 aa19.01■□□□□ 0.63
HMBS-210ENST00000539045 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
HMBS-210ENST00000539045 PRDM2Q13029 1718 aa19■□□□□ 0.63
HMBS-210ENST00000539045 OSCARQ8IYS5 282 aa18.89■□□□□ 0.61
HMBS-210ENST00000539045 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
HMBS-210ENST00000539045 IFT140Q96RY7 1462 aa18.8■□□□□ 0.6
HMBS-210ENST00000539045 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
HMBS-210ENST00000539045 TOPBP1Q92547 1522 aa18.77■□□□□ 0.6
HMBS-210ENST00000539045 RIMBP3CA6NJZ7 1639 aa18.74■□□□□ 0.59
HMBS-210ENST00000539045 RIMBP3BA6NNM3 1639 aa18.74■□□□□ 0.59
HMBS-210ENST00000539045 RIMBP3Q9UFD9 1639 aa18.74■□□□□ 0.59
HMBS-210ENST00000539045 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
HMBS-210ENST00000539045 EIF4G3O43432 1585 aaKnown RBP18.71■□□□□ 0.59
HMBS-210ENST00000539045 DNMBPQ6XZF7 1577 aa18.7■□□□□ 0.58
HMBS-210ENST00000539045 ARHGEF11O15085 1522 aa18.64■□□□□ 0.58
HMBS-210ENST00000539045 TARBP1Q13395 1621 aaKnown RBP18.64■□□□□ 0.57
HMBS-210ENST00000539045 CHD1O14646 1710 aa18.61■□□□□ 0.57
HMBS-210ENST00000539045 AQRO60306 1485 aaKnown RBP eCLIP18.57■□□□□ 0.56
HMBS-210ENST00000539045 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
HMBS-210ENST00000539045 RAD54L2Q9Y4B4 1467 aa18.48■□□□□ 0.55
HMBS-210ENST00000539045 WDR97A6NE52 1622 aa18.45■□□□□ 0.54
HMBS-210ENST00000539045 CYB5RLQ6IPT4 315 aa18.45■□□□□ 0.54
HMBS-210ENST00000539045 ARAP1Q96P48 1450 aa18.45■□□□□ 0.54
HMBS-210ENST00000539045 SOGA1O94964 1423 aa18.44■□□□□ 0.54
HMBS-210ENST00000539045 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
HMBS-210ENST00000539045 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
HMBS-210ENST00000539045 FBLN2P98095 1184 aa18.42■□□□□ 0.54
HMBS-210ENST00000539045 CUX1P39880 1505 aa18.4■□□□□ 0.54
HMBS-210ENST00000539045 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.54
HMBS-210ENST00000539045 CLASP1Q7Z460 1538 aa18.38■□□□□ 0.53
HMBS-210ENST00000539045 MAGI1Q96QZ7 1491 aaPredicted RBP18.35■□□□□ 0.53
HMBS-210ENST00000539045 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
HMBS-210ENST00000539045 GRIN2BQ13224 1484 aa18.33■□□□□ 0.52
HMBS-210ENST00000539045 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
HMBS-210ENST00000539045 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
HMBS-210ENST00000539045 CHMP7Q8WUX9 453 aaPredicted RBP18.28■□□□□ 0.52
HMBS-210ENST00000539045 TRHP20396 242 aaPredicted RBP18.27■□□□□ 0.52
HMBS-210ENST00000539045 GAPVD1Q14C86 1478 aa18.24■□□□□ 0.51
HMBS-210ENST00000539045 ABCA5Q8WWZ7 1642 aa18.23■□□□□ 0.51
HMBS-210ENST00000539045 ABCA10Q8WWZ4 1543 aa18.22■□□□□ 0.51
HMBS-210ENST00000539045 BIVM-ERCC5R4GMW8 1640 aa18.11■□□□□ 0.49
HMBS-210ENST00000539045 GRIN2AQ12879 1464 aa18.1■□□□□ 0.49
HMBS-210ENST00000539045 ADAMTS12P58397 1594 aa18.09■□□□□ 0.49
HMBS-210ENST00000539045 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.49
HMBS-210ENST00000539045 TOP2BQ02880 1626 aa18.08■□□□□ 0.48
HMBS-210ENST00000539045 SUPT5HO00267 1087 aaKnown RBP18.07■□□□□ 0.48
HMBS-210ENST00000539045 CEP170Q5SW79 1584 aa18.06■□□□□ 0.48
HMBS-210ENST00000539045 ERCC6L2Q5T890 1561 aa18.06■□□□□ 0.48
HMBS-210ENST00000539045 NUP160Q12769 1436 aa18.05■□□□□ 0.48
HMBS-210ENST00000539045 SHROOM2Q13796 1616 aa18.02■□□□□ 0.48
HMBS-210ENST00000539045 FHAD1B1AJZ9 1412 aa18■□□□□ 0.47
HMBS-210ENST00000539045 ERICH3Q5RHP9 1530 aa17.99■□□□□ 0.47
HMBS-210ENST00000539045 KIF13AQ9H1H9 1805 aa17.88■□□□□ 0.45
HMBS-210ENST00000539045 RUSC2Q8N2Y8 1516 aa17.86■□□□□ 0.45
HMBS-210ENST00000539045 PRG4Q92954 1404 aaPredicted RBP17.85■□□□□ 0.45
HMBS-210ENST00000539045 AEBP2Q6ZN18 517 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms