RNA–Protein interactions for RNA: ENST00000538877.5

RAP1B-218, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-218ENST00000538877 NISCHQ9Y2I1 1504 aa59.6■■■■■ 7.13
RAP1B-218ENST00000538877 CCDC180Q9P1Z9 1646 aa53.57■■■■■ 6.17
RAP1B-218ENST00000538877 ABCC9O60706 1549 aa53.4■■■■■ 6.14
RAP1B-218ENST00000538877 RB1CC1Q8TDY2 1594 aa50.89■■■■■ 5.74
RAP1B-218ENST00000538877 NACADO15069 1562 aa50.53■■■■■ 5.68
RAP1B-218ENST00000538877 DCAF8L2P0C7V8 631 aa50.24■■■■■ 5.63
RAP1B-218ENST00000538877 DNAJC5BQ9UF47 199 aa49.93■■■■■ 5.58
RAP1B-218ENST00000538877 UNC13AQ9UPW8 1703 aa49.91■■■■■ 5.58
RAP1B-218ENST00000538877 MYO15BQ96JP2 1530 aa49.81■■■■■ 5.56
RAP1B-218ENST00000538877 PABPN1Q86U42 306 aaKnown RBP eCLIP49.67■■■■■ 5.54
RAP1B-218ENST00000538877 ZCCHC6Q5VYS8 1495 aaKnown RBP49.44■■■■■ 5.5
RAP1B-218ENST00000538877 BICRAQ9NZM4 1560 aa49.41■■■■■ 5.5
RAP1B-218ENST00000538877 DCAF1Q9Y4B6 1507 aa49.22■■■■■ 5.47
RAP1B-218ENST00000538877 SCRIBQ14160 1630 aa48.81■■■■■ 5.4
RAP1B-218ENST00000538877 SHROOM4Q9ULL8 1493 aa48.69■■■■■ 5.39
RAP1B-218ENST00000538877 CC2D2AQ9P2K1 1620 aa48.29■■■■■ 5.32
RAP1B-218ENST00000538877 EIF4G1Q04637 1599 aaKnown RBP48.18■■■■■ 5.3
RAP1B-218ENST00000538877 CECR2Q9BXF3 1484 aa48.08■■■■■ 5.29
RAP1B-218ENST00000538877 NCAPD3P42695 1498 aa46.58■■■■■ 5.05
RAP1B-218ENST00000538877 SMARCA4P51532 1647 aa46.55■■■■■ 5.04
RAP1B-218ENST00000538877 ATAD2BQ9ULI0 1458 aa46.49■■■■■ 5.03
RAP1B-218ENST00000538877 SMARCA2P51531 1590 aa46.41■■■■■ 5.02
RAP1B-218ENST00000538877 HMGXB3Q12766 1538 aa46.33■■■■■ 5.01
RAP1B-218ENST00000538877 BAZ1AQ9NRL2 1556 aaPredicted RBP46.29■■■■■ 5
RAP1B-218ENST00000538877 ERCC6Q03468 1493 aa46.11■■■■■ 4.97
RAP1B-218ENST00000538877 BAZ1BQ9UIG0 1483 aaKnown RBP46.08■■■■■ 4.97
RAP1B-218ENST00000538877 PEG3Q9GZU2 1588 aa46.05■■■■■ 4.96
RAP1B-218ENST00000538877 CUX2O14529 1486 aa45.96■■■■■ 4.95
RAP1B-218ENST00000538877 MROH2BQ7Z745 1585 aa45.96■■■■■ 4.95
RAP1B-218ENST00000538877 NESP48681 1621 aa45.91■■■■■ 4.94
RAP1B-218ENST00000538877 DNAJC5Q9H3Z4 198 aa45.76■■■■■ 4.92
RAP1B-218ENST00000538877 LAMC3Q9Y6N6 1575 aa45.61■■■■■ 4.89
RAP1B-218ENST00000538877 THOC2Q8NI27 1593 aaKnown RBP45.49■■■■■ 4.87
RAP1B-218ENST00000538877 WIZO95785 1651 aa45.48■■■■■ 4.87
RAP1B-218ENST00000538877 KIF21AQ7Z4S6 1674 aa45.44■■■■■ 4.87
RAP1B-218ENST00000538877 PDS5BQ9NTI5 1447 aa45.27■■■■■ 4.84
RAP1B-218ENST00000538877 CADPSQ9ULU8 1353 aa45.17■■■■■ 4.82
RAP1B-218ENST00000538877 RSF1Q96T23 1441 aaPredicted RBP44.98■■■■■ 4.79
RAP1B-218ENST00000538877 MRC2Q9UBG0 1479 aa44.92■■■■■ 4.78
RAP1B-218ENST00000538877 TOP2AP11388 1531 aaKnown RBP44.85■■■■■ 4.77
RAP1B-218ENST00000538877 WDR62O43379 1518 aa44.84■■■■■ 4.77
RAP1B-218ENST00000538877 CEP164Q9UPV0 1460 aa44.78■■■■■ 4.76
RAP1B-218ENST00000538877 FANCD2Q9BXW9 1451 aa44.72■■■■■ 4.75
RAP1B-218ENST00000538877 CFTRP13569 1480 aa44.7■■■■■ 4.75
RAP1B-218ENST00000538877 PRDM2Q13029 1718 aa44.5■■■■■ 4.71
RAP1B-218ENST00000538877 URB2Q14146 1524 aaKnown RBP44.35■■■■■ 4.69
RAP1B-218ENST00000538877 CCDC88BA6NC98 1476 aa44.3■■■■■ 4.68
RAP1B-218ENST00000538877 TOPBP1Q92547 1522 aa43.89■■■■■ 4.62
RAP1B-218ENST00000538877 TRIM41Q8WV44 630 aa43.86■■■■■ 4.61
RAP1B-218ENST00000538877 IFT140Q96RY7 1462 aa43.84■■■■■ 4.61
RAP1B-218ENST00000538877 OSCARQ8IYS5 282 aa43.81■■■■■ 4.6
RAP1B-218ENST00000538877 ZNF608Q9ULD9 1512 aaPredicted RBP43.79■■■■■ 4.6
RAP1B-218ENST00000538877 DNMBPQ6XZF7 1577 aa43.77■■■■■ 4.6
RAP1B-218ENST00000538877 ABCC8Q09428 1581 aa43.76■■■■■ 4.6
RAP1B-218ENST00000538877 EIF4G3O43432 1585 aaKnown RBP43.63■■■■■ 4.58
RAP1B-218ENST00000538877 TARBP1Q13395 1621 aaKnown RBP43.54■■■■■ 4.56
RAP1B-218ENST00000538877 POLA1P09884 1462 aaPredicted RBP43.45■■■■■ 4.55
RAP1B-218ENST00000538877 RIMBP3CA6NJZ7 1639 aa43.39■■■■■ 4.54
RAP1B-218ENST00000538877 RIMBP3BA6NNM3 1639 aa43.39■■■■■ 4.54
RAP1B-218ENST00000538877 RIMBP3Q9UFD9 1639 aa43.39■■■■■ 4.54
RAP1B-218ENST00000538877 AQRO60306 1485 aaKnown RBP eCLIP43.38■■■■■ 4.541e-6■■■■□ 26.1
RAP1B-218ENST00000538877 CHD1O14646 1710 aa43.36■■■■■ 4.53
RAP1B-218ENST00000538877 RAD54L2Q9Y4B4 1467 aa43.28■■■■■ 4.52
RAP1B-218ENST00000538877 ARHGEF11O15085 1522 aa43.21■■■■■ 4.51
RAP1B-218ENST00000538877 SOGA1O94964 1423 aa43.21■■■■■ 4.51
RAP1B-218ENST00000538877 FGD5Q6ZNL6 1462 aa43.19■■■■■ 4.51
RAP1B-218ENST00000538877 CUX1P39880 1505 aa43.18■■■■■ 4.5
RAP1B-218ENST00000538877 TDRD9Q8NDG6 1382 aaKnown RBP43.11■■■■■ 4.49
RAP1B-218ENST00000538877 WDR97A6NE52 1622 aa43.08■■■■■ 4.49
RAP1B-218ENST00000538877 FBLN2P98095 1184 aa43.07■■■■■ 4.49
RAP1B-218ENST00000538877 SUPT5HO00267 1087 aaKnown RBP43.05■■■■■ 4.48
RAP1B-218ENST00000538877 SNAPC4Q5SXM2 1469 aa42.98■■■■■ 4.47
RAP1B-218ENST00000538877 MAGI1Q96QZ7 1491 aaPredicted RBP42.86■■■■■ 4.45
RAP1B-218ENST00000538877 PBRM1Q86U86 1689 aa42.85■■■■■ 4.45
RAP1B-218ENST00000538877 GRIN2BQ13224 1484 aa42.84■■■■■ 4.45
RAP1B-218ENST00000538877 CYB5RLQ6IPT4 315 aa42.81■■■■■ 4.44
RAP1B-218ENST00000538877 ARAP1Q96P48 1450 aa42.79■■■■■ 4.44
RAP1B-218ENST00000538877 CLASP1Q7Z460 1538 aa42.75■■■■■ 4.43
RAP1B-218ENST00000538877 SYNJ1O43426 1573 aa42.74■■■■■ 4.43
RAP1B-218ENST00000538877 CHMP7Q8WUX9 453 aaPredicted RBP42.74■■■■■ 4.43
RAP1B-218ENST00000538877 GAPVD1Q14C86 1478 aa42.72■■■■■ 4.43
RAP1B-218ENST00000538877 SYNJ2O15056 1496 aa42.7■■■■■ 4.43
RAP1B-218ENST00000538877 ABCA5Q8WWZ7 1642 aa42.69■■■■■ 4.42
RAP1B-218ENST00000538877 ABCA10Q8WWZ4 1543 aa42.69■■■■■ 4.42
RAP1B-218ENST00000538877 BIVM-ERCC5R4GMW8 1640 aa42.57■■■■■ 4.41
RAP1B-218ENST00000538877 TOP2BQ02880 1626 aa42.53■■■■■ 4.4
RAP1B-218ENST00000538877 WRNQ14191 1432 aaPredicted RBP eCLIP42.51■■■■■ 4.4
RAP1B-218ENST00000538877 ADAMTS12P58397 1594 aa42.37■■■■■ 4.37
RAP1B-218ENST00000538877 TRHP20396 242 aaPredicted RBP42.33■■■■■ 4.37
RAP1B-218ENST00000538877 GRIN2AQ12879 1464 aa42.31■■■■■ 4.36
RAP1B-218ENST00000538877 CEP170Q5SW79 1584 aa42.21■■■■■ 4.35
RAP1B-218ENST00000538877 ERICH3Q5RHP9 1530 aa42.17■■■■■ 4.34
RAP1B-218ENST00000538877 FHAD1B1AJZ9 1412 aa42.15■■■■■ 4.34
RAP1B-218ENST00000538877 NUP160Q12769 1436 aa42.14■■■■■ 4.34
RAP1B-218ENST00000538877 ERCC6L2Q5T890 1561 aa42.11■■■■■ 4.33
RAP1B-218ENST00000538877 SHROOM2Q13796 1616 aa42.03■■■■■ 4.32
RAP1B-218ENST00000538877 RUSC2Q8N2Y8 1516 aa41.78■■■■■ 4.28
RAP1B-218ENST00000538877 PRG4Q92954 1404 aaPredicted RBP41.73■■■■■ 4.27
RAP1B-218ENST00000538877 JPH4Q96JJ6 628 aa41.66■■■■■ 4.26
RAP1B-218ENST00000538877 CUL7Q14999 1698 aa41.64■■■■■ 4.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms