RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-222ENST00000538689 CHIC1Q5VXU3 224 aa15.69■□□□□ 0.1
FDFT1-222ENST00000538689 NISCHQ9Y2I1 1504 aa15.62■□□□□ 0.09
FDFT1-222ENST00000538689 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
FDFT1-222ENST00000538689 PHF23Q9BUL5 403 aaPredicted RBP14□□□□□ -0.17
FDFT1-222ENST00000538689 CCDC180Q9P1Z9 1646 aa13.74□□□□□ -0.21
FDFT1-222ENST00000538689 ABCC9O60706 1549 aa13.4□□□□□ -0.26
FDFT1-222ENST00000538689 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.28
FDFT1-222ENST00000538689 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
FDFT1-222ENST00000538689 ZCCHC6Q5VYS8 1495 aaKnown RBP13.14□□□□□ -0.31
FDFT1-222ENST00000538689 DCAF8L2P0C7V8 631 aa12.99□□□□□ -0.33
FDFT1-222ENST00000538689 DCAF1Q9Y4B6 1507 aa12.93□□□□□ -0.34
FDFT1-222ENST00000538689 NACADO15069 1562 aa12.87□□□□□ -0.35
FDFT1-222ENST00000538689 RB1CC1Q8TDY2 1594 aa12.86□□□□□ -0.35
FDFT1-222ENST00000538689 SHROOM4Q9ULL8 1493 aa12.81□□□□□ -0.36
FDFT1-222ENST00000538689 MYO15BQ96JP2 1530 aa12.8□□□□□ -0.36
FDFT1-222ENST00000538689 KCNA4P22459 653 aa12.78□□□□□ -0.36
FDFT1-222ENST00000538689 UNC13AQ9UPW8 1703 aa12.7□□□□□ -0.38
FDFT1-222ENST00000538689 SLC24A1O60721 1099 aa12.66□□□□□ -0.38
FDFT1-222ENST00000538689 SCRIBQ14160 1630 aa12.63□□□□□ -0.39
FDFT1-222ENST00000538689 SENP3Q9H4L4 574 aaPredicted RBP12.57□□□□□ -0.4
FDFT1-222ENST00000538689 PABPN1Q86U42 306 aaKnown RBP eCLIP12.56□□□□□ -0.4
FDFT1-222ENST00000538689 BICRAQ9NZM4 1560 aa12.56□□□□□ -0.4
FDFT1-222ENST00000538689 CSRNP3Q8WYN3 585 aa12.53□□□□□ -0.4
FDFT1-222ENST00000538689 ADRA2BP18089 450 aa12.47□□□□□ -0.41
FDFT1-222ENST00000538689 SUPT5HO00267 1087 aaKnown RBP12.4□□□□□ -0.42
FDFT1-222ENST00000538689 SLC4A1APQ9BWU0 796 aaKnown RBP12.28□□□□□ -0.44
FDFT1-222ENST00000538689 DNAJC5BQ9UF47 199 aa12.23□□□□□ -0.45
FDFT1-222ENST00000538689 CECR2Q9BXF3 1484 aa12.18□□□□□ -0.46
FDFT1-222ENST00000538689 EIF4G1Q04637 1599 aaKnown RBP12.18□□□□□ -0.46
FDFT1-222ENST00000538689 RSF1Q96T23 1441 aaPredicted RBP12.18□□□□□ -0.46
FDFT1-222ENST00000538689 RTN4Q9NQC3 1192 aaKnown RBP12.17□□□□□ -0.46
FDFT1-222ENST00000538689 CC2D2AQ9P2K1 1620 aa12.11□□□□□ -0.47
FDFT1-222ENST00000538689 MROH2BQ7Z745 1585 aa12.07□□□□□ -0.48
FDFT1-222ENST00000538689 SMARCA4P51532 1647 aa12.06□□□□□ -0.48
FDFT1-222ENST00000538689 PPP6R1Q9UPN7 881 aa12.06□□□□□ -0.48
FDFT1-222ENST00000538689 BAZ1AQ9NRL2 1556 aaPredicted RBP12.05□□□□□ -0.48
FDFT1-222ENST00000538689 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
FDFT1-222ENST00000538689 WIZO95785 1651 aa11.97□□□□□ -0.49
FDFT1-222ENST00000538689 ATAD2BQ9ULI0 1458 aa11.95□□□□□ -0.5
FDFT1-222ENST00000538689 PEG3Q9GZU2 1588 aa11.9□□□□□ -0.5
FDFT1-222ENST00000538689 NCAPD3P42695 1498 aa11.89□□□□□ -0.51
FDFT1-222ENST00000538689 SMARCA2P51531 1590 aa11.89□□□□□ -0.51
FDFT1-222ENST00000538689 TOP2AP11388 1531 aaKnown RBP11.85□□□□□ -0.51
FDFT1-222ENST00000538689 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
FDFT1-222ENST00000538689 HMGXB3Q12766 1538 aa11.84□□□□□ -0.51
FDFT1-222ENST00000538689 ZBTB22O15209 634 aa11.81□□□□□ -0.52
FDFT1-222ENST00000538689 PPP4R3CPQ6ZMV5 832 aa11.77□□□□□ -0.52
FDFT1-222ENST00000538689 CCDC88BA6NC98 1476 aa11.74□□□□□ -0.53
FDFT1-222ENST00000538689 NCBP3Q53F19 620 aaKnown RBP11.67□□□□□ -0.54
FDFT1-222ENST00000538689 NESP48681 1621 aa11.67□□□□□ -0.54
FDFT1-222ENST00000538689 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
FDFT1-222ENST00000538689 NPM3O75607 178 aaKnown RBP11.64□□□□□ -0.55
FDFT1-222ENST00000538689 FOXD1Q16676 465 aa11.62□□□□□ -0.55
FDFT1-222ENST00000538689 CADPSQ9ULU8 1353 aa11.56□□□□□ -0.56
FDFT1-222ENST00000538689 LAMC3Q9Y6N6 1575 aa11.55□□□□□ -0.56
FDFT1-222ENST00000538689 CFTRP13569 1480 aa11.53□□□□□ -0.56
FDFT1-222ENST00000538689 ABCC8Q09428 1581 aa11.52□□□□□ -0.57
FDFT1-222ENST00000538689 KIF21AQ7Z4S6 1674 aa11.51□□□□□ -0.57
FDFT1-222ENST00000538689 LOC105371045A0A1W2PR82 267 aa11.49□□□□□ -0.57
FDFT1-222ENST00000538689 PRDM2Q13029 1718 aa11.47□□□□□ -0.57
FDFT1-222ENST00000538689 ERCC6Q03468 1493 aa11.46□□□□□ -0.57
FDFT1-222ENST00000538689 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
FDFT1-222ENST00000538689 FANCD2Q9BXW9 1451 aa11.44□□□□□ -0.58
FDFT1-222ENST00000538689 PDS5BQ9NTI5 1447 aa11.44□□□□□ -0.58
FDFT1-222ENST00000538689 FAM9AQ8IZU1 332 aaPredicted RBP11.43□□□□□ -0.58
FDFT1-222ENST00000538689 THOC2Q8NI27 1593 aaKnown RBP11.41□□□□□ -0.58
FDFT1-222ENST00000538689 CEP164Q9UPV0 1460 aa11.39□□□□□ -0.59
FDFT1-222ENST00000538689 SYNJ1O43426 1573 aa11.38□□□□□ -0.59
FDFT1-222ENST00000538689 FOXD4L1Q9NU39 408 aa11.36□□□□□ -0.59
FDFT1-222ENST00000538689 URB2Q14146 1524 aaKnown RBP11.36□□□□□ -0.59
FDFT1-222ENST00000538689 EEA1Q15075 1411 aa11.35□□□□□ -0.59
FDFT1-222ENST00000538689 MRC2Q9UBG0 1479 aa11.35□□□□□ -0.59
FDFT1-222ENST00000538689 SOGA1O94964 1423 aa11.34□□□□□ -0.59
FDFT1-222ENST00000538689 TOP2BQ02880 1626 aa11.34□□□□□ -0.59
FDFT1-222ENST00000538689 WDR62O43379 1518 aa11.32□□□□□ -0.6
FDFT1-222ENST00000538689 BIVM-ERCC5R4GMW8 1640 aa11.31□□□□□ -0.6
FDFT1-222ENST00000538689 RUSC2Q8N2Y8 1516 aa11.29□□□□□ -0.6
FDFT1-222ENST00000538689 TOPBP1Q92547 1522 aa11.29□□□□□ -0.6
FDFT1-222ENST00000538689 CUX1P39880 1505 aa11.28□□□□□ -0.6
FDFT1-222ENST00000538689 FKBP8Q14318 412 aa11.28□□□□□ -0.6
FDFT1-222ENST00000538689 DNMBPQ6XZF7 1577 aa11.26□□□□□ -0.61
FDFT1-222ENST00000538689 CUX2O14529 1486 aa11.26□□□□□ -0.61
FDFT1-222ENST00000538689 PIAS4Q8N2W9 510 aaPredicted RBP11.24□□□□□ -0.61
FDFT1-222ENST00000538689 POLA1P09884 1462 aaPredicted RBP11.21□□□□□ -0.61
FDFT1-222ENST00000538689 FGD5Q6ZNL6 1462 aa11.21□□□□□ -0.62
FDFT1-222ENST00000538689 RAD54L2Q9Y4B4 1467 aa11.2□□□□□ -0.62
FDFT1-222ENST00000538689 TNIKQ9UKE5 1360 aa11.19□□□□□ -0.62
FDFT1-222ENST00000538689 GOLGA3Q08378 1498 aa11.19□□□□□ -0.62
FDFT1-222ENST00000538689 KIF21BO75037 1637 aa11.18□□□□□ -0.62
FDFT1-222ENST00000538689 PRKCSHP14314 528 aaPredicted RBP11.18□□□□□ -0.62
FDFT1-222ENST00000538689 TARBP1Q13395 1621 aaKnown RBP11.17□□□□□ -0.62
FDFT1-222ENST00000538689 ZNF608Q9ULD9 1512 aaPredicted RBP11.17□□□□□ -0.62
FDFT1-222ENST00000538689 CNKSR2Q8WXI2 1034 aa11.16□□□□□ -0.62
FDFT1-222ENST00000538689 UBTFP17480 764 aaKnown RBP11.15□□□□□ -0.62
FDFT1-222ENST00000538689 KIF27Q86VH2 1401 aa11.15□□□□□ -0.62
FDFT1-222ENST00000538689 IFT140Q96RY7 1462 aa11.13□□□□□ -0.63
FDFT1-222ENST00000538689 CEP162Q5TB80 1403 aa11.13□□□□□ -0.63
FDFT1-222ENST00000538689 WDR97A6NE52 1622 aa11.12□□□□□ -0.63
FDFT1-222ENST00000538689 PRXQ9BXM0 1461 aa11.11□□□□□ -0.63
FDFT1-222ENST00000538689 AQRO60306 1485 aaKnown RBP eCLIP11.11□□□□□ -0.633e-7■■■■□ 23
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms