RNA–Protein interactions for RNA: ENST00000538430.1

AC007848.1-201, humanhuman

TSL 5 BASIC

Gene AC007848.1, Length 1,405 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007848.1-201ENST00000538430 AEBP2Q6ZN18 517 aaPredicted RBP24.5■■□□□ 1.51
AC007848.1-201ENST00000538430 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
AC007848.1-201ENST00000538430 PHF23Q9BUL5 403 aaPredicted RBP21.04■□□□□ 0.96
AC007848.1-201ENST00000538430 SENP3Q9H4L4 574 aaPredicted RBP20.7■□□□□ 0.9
AC007848.1-201ENST00000538430 NISCHQ9Y2I1 1504 aa19.6■□□□□ 0.73
AC007848.1-201ENST00000538430 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
AC007848.1-201ENST00000538430 FOXD1Q16676 465 aa19.26■□□□□ 0.67
AC007848.1-201ENST00000538430 PPP6R1Q9UPN7 881 aa18.56■□□□□ 0.56
AC007848.1-201ENST00000538430 ADRA2BP18089 450 aa18.48■□□□□ 0.55
AC007848.1-201ENST00000538430 PIAS4Q8N2W9 510 aaPredicted RBP18.06■□□□□ 0.48
AC007848.1-201ENST00000538430 MSH5O43196 834 aa17.7■□□□□ 0.42
AC007848.1-201ENST00000538430 CCDC180Q9P1Z9 1646 aa17.38■□□□□ 0.37
AC007848.1-201ENST00000538430 ABCC9O60706 1549 aa17.11■□□□□ 0.33
AC007848.1-201ENST00000538430 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
AC007848.1-201ENST00000538430 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
AC007848.1-201ENST00000538430 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
AC007848.1-201ENST00000538430 POTEDQ86YR6 584 aa16.73■□□□□ 0.27
AC007848.1-201ENST00000538430 KCNA4P22459 653 aa16.6■□□□□ 0.25
AC007848.1-201ENST00000538430 DMRT2Q9Y5R5 561 aa16.56■□□□□ 0.24
AC007848.1-201ENST00000538430 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
AC007848.1-201ENST00000538430 CNKSR2Q8WXI2 1034 aa16.53■□□□□ 0.24
AC007848.1-201ENST00000538430 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
AC007848.1-201ENST00000538430 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
AC007848.1-201ENST00000538430 NACADO15069 1562 aa16.34■□□□□ 0.21
AC007848.1-201ENST00000538430 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
AC007848.1-201ENST00000538430 ZCCHC6Q5VYS8 1495 aaKnown RBP16.3■□□□□ 0.2
AC007848.1-201ENST00000538430 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
AC007848.1-201ENST00000538430 HOXD11P31277 338 aaPredicted RBP16.23■□□□□ 0.19
AC007848.1-201ENST00000538430 MYO15BQ96JP2 1530 aa16.17■□□□□ 0.18
AC007848.1-201ENST00000538430 DCAF1Q9Y4B6 1507 aa16.14■□□□□ 0.17
AC007848.1-201ENST00000538430 UNC13AQ9UPW8 1703 aa16.1■□□□□ 0.17
AC007848.1-201ENST00000538430 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
AC007848.1-201ENST00000538430 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
AC007848.1-201ENST00000538430 SCRIBQ14160 1630 aa15.96■□□□□ 0.15
AC007848.1-201ENST00000538430 BICRAQ9NZM4 1560 aa15.91■□□□□ 0.14
AC007848.1-201ENST00000538430 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
AC007848.1-201ENST00000538430 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
AC007848.1-201ENST00000538430 SHROOM4Q9ULL8 1493 aa15.65■□□□□ 0.1
AC007848.1-201ENST00000538430 SLC4A2P04920 1241 aa15.49■□□□□ 0.07
AC007848.1-201ENST00000538430 EIF4G1Q04637 1599 aaKnown RBP15.48■□□□□ 0.07
AC007848.1-201ENST00000538430 CC2D2AQ9P2K1 1620 aa15.44■□□□□ 0.06
AC007848.1-201ENST00000538430 CECR2Q9BXF3 1484 aa15.34■□□□□ 0.05
AC007848.1-201ENST00000538430 ZBTB22O15209 634 aa15.34■□□□□ 0.05
AC007848.1-201ENST00000538430 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.33■□□□□ 0.04
AC007848.1-201ENST00000538430 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
AC007848.1-201ENST00000538430 RNF39Q9H2S5 420 aa15.24■□□□□ 0.03
AC007848.1-201ENST00000538430 SMARCA4P51532 1647 aa15.22■□□□□ 0.03
AC007848.1-201ENST00000538430 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
AC007848.1-201ENST00000538430 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
AC007848.1-201ENST00000538430 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
AC007848.1-201ENST00000538430 BAZ1AQ9NRL2 1556 aaPredicted RBP15.17■□□□□ 0.02
AC007848.1-201ENST00000538430 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
AC007848.1-201ENST00000538430 ATAD2BQ9ULI0 1458 aa15.12■□□□□ 0.01
AC007848.1-201ENST00000538430 NCAPD3P42695 1498 aa15.08■□□□□ 0
AC007848.1-201ENST00000538430 SMARCA2P51531 1590 aa15.07■□□□□ 0
AC007848.1-201ENST00000538430 MYCNP04198 464 aaPredicted RBP15.04■□□□□ -0
AC007848.1-201ENST00000538430 WIZO95785 1651 aa15.03■□□□□ -0
AC007848.1-201ENST00000538430 C1QBPQ07021 282 aaKnown RBP15.01□□□□□ -0.01
AC007848.1-201ENST00000538430 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
AC007848.1-201ENST00000538430 PEG3Q9GZU2 1588 aa15□□□□□ -0.01
AC007848.1-201ENST00000538430 HMGXB3Q12766 1538 aa14.98□□□□□ -0.01
AC007848.1-201ENST00000538430 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.01
AC007848.1-201ENST00000538430 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.88□□□□□ -0.03
AC007848.1-201ENST00000538430 HNRNPUL2Q1KMD3 747 aaKnown RBP14.88□□□□□ -0.03
AC007848.1-201ENST00000538430 SAMD1Q6SPF0 538 aaPredicted RBP14.85□□□□□ -0.03
AC007848.1-201ENST00000538430 NESP48681 1621 aa14.82□□□□□ -0.04
AC007848.1-201ENST00000538430 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
AC007848.1-201ENST00000538430 ATXN8OSP0DMR3 200 aa14.75□□□□□ -0.05
AC007848.1-201ENST00000538430 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
AC007848.1-201ENST00000538430 SPINK5Q9NQ38 1064 aaPredicted RBP14.75□□□□□ -0.05
AC007848.1-201ENST00000538430 SUPT5HO00267 1087 aaKnown RBP14.74□□□□□ -0.05
AC007848.1-201ENST00000538430 ATF5Q9Y2D1 282 aaPredicted RBP14.73□□□□□ -0.05
AC007848.1-201ENST00000538430 ERCC6Q03468 1493 aa14.71□□□□□ -0.05
AC007848.1-201ENST00000538430 APLP2Q06481 763 aa14.69□□□□□ -0.06
AC007848.1-201ENST00000538430 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
AC007848.1-201ENST00000538430 CADPSQ9ULU8 1353 aa14.67□□□□□ -0.06
AC007848.1-201ENST00000538430 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
AC007848.1-201ENST00000538430 KIF21AQ7Z4S6 1674 aa14.64□□□□□ -0.07
AC007848.1-201ENST00000538430 PDS5BQ9NTI5 1447 aa14.59□□□□□ -0.07
AC007848.1-201ENST00000538430 CAPN15O75808 1086 aa14.59□□□□□ -0.07
AC007848.1-201ENST00000538430 CFTRP13569 1480 aa14.57□□□□□ -0.08
AC007848.1-201ENST00000538430 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
AC007848.1-201ENST00000538430 TRHP20396 242 aaPredicted RBP14.52□□□□□ -0.08
AC007848.1-201ENST00000538430 FANCD2Q9BXW9 1451 aa14.52□□□□□ -0.09
AC007848.1-201ENST00000538430 THOC2Q8NI27 1593 aaKnown RBP14.52□□□□□ -0.09
AC007848.1-201ENST00000538430 PRDM2Q13029 1718 aa14.5□□□□□ -0.09
AC007848.1-201ENST00000538430 CEP164Q9UPV0 1460 aa14.48□□□□□ -0.09
AC007848.1-201ENST00000538430 DSG3P32926 999 aa14.48□□□□□ -0.09
AC007848.1-201ENST00000538430 CUX2O14529 1486 aa14.47□□□□□ -0.09
AC007848.1-201ENST00000538430 MRC2Q9UBG0 1479 aa14.45□□□□□ -0.1
AC007848.1-201ENST00000538430 WDR62O43379 1518 aa14.39□□□□□ -0.11
AC007848.1-201ENST00000538430 URB2Q14146 1524 aaKnown RBP14.39□□□□□ -0.11
AC007848.1-201ENST00000538430 ABCB7O75027 752 aa14.34□□□□□ -0.11
AC007848.1-201ENST00000538430 POLA2Q14181 598 aa14.34□□□□□ -0.11
AC007848.1-201ENST00000538430 TOPBP1Q92547 1522 aa14.29□□□□□ -0.12
AC007848.1-201ENST00000538430 DNMBPQ6XZF7 1577 aa14.25□□□□□ -0.13
AC007848.1-201ENST00000538430 ABCC8Q09428 1581 aa14.23□□□□□ -0.13
AC007848.1-201ENST00000538430 CUX1P39880 1505 aa14.21□□□□□ -0.14
AC007848.1-201ENST00000538430 ZNF608Q9ULD9 1512 aaPredicted RBP14.17□□□□□ -0.14
AC007848.1-201ENST00000538430 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms