RNA–Protein interactions for RNA: ENST00000538392.1

C12orf57-203, Transcript of chromosome 12 open reading frame 57, humanhuman

TSL 2

Gene C12orf57, Length 979 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf57-203ENST00000538392 LSM11P83369 360 aaKnown RBP eCLIP16.28■□□□□ 0.22e-154■■■■■ 1949.4
C12orf57-203ENST00000538392 SF3B1O75533 1304 aaKnown RBP eCLIP20.69■□□□□ 0.94e-7■■■■■ 133.7
C12orf57-203ENST00000538392 NSUN2Q08J23 767 aaKnown RBP eCLIP19.01■□□□□ 0.632e-18■■■■■ 76.3
C12orf57-203ENST00000538392 EIF3DO15371 548 aaKnown RBP eCLIP20.36■□□□□ 0.851e-20■■■■■ 66.6
C12orf57-203ENST00000538392 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.68■■■□□ 2.52e-6■■■■■ 65.9
C12orf57-203ENST00000538392 AATFQ9NY61 560 aaKnown RBP eCLIP23.03■■□□□ 1.283e-11■■■■■ 59.3
C12orf57-203ENST00000538392 DKC1O60832 514 aaKnown RBP eCLIP21.15■□□□□ 0.986e-7■■■■■ 56.4
C12orf57-203ENST00000538392 DDX3XO00571 662 aaKnown RBP eCLIP19.21■□□□□ 0.673e-22■■■■■ 55.8
C12orf57-203ENST00000538392 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.77■□□□□ 0.762e-6■■■■■ 55.4
C12orf57-203ENST00000538392 NCBP2P52298 156 aaKnown RBP eCLIP17.24■□□□□ 0.359e-8■■■■■ 49
C12orf57-203ENST00000538392 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.39■□□□□ 0.538e-9■■■■■ 37.8
C12orf57-203ENST00000538392 TIA1P31483 386 aaKnown RBP eCLIP17.33■□□□□ 0.365e-22■■■■■ 32.4
C12orf57-203ENST00000538392 NOLC1Q14978 699 aaKnown RBP eCLIP20.65■□□□□ 0.92e-7■■■■■ 27.8
C12orf57-203ENST00000538392 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.57■□□□□ 0.728e-9■■■■□ 25.8
C12orf57-203ENST00000538392 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.21■■□□□ 1.311e-7■■■■□ 25.5
C12orf57-203ENST00000538392 AQRO60306 1485 aaKnown RBP eCLIP33.58■■■□□ 2.971e-13■■■■□ 24.4
C12orf57-203ENST00000538392 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.43■■□□□ 1.025e-11■■■■□ 21.7
C12orf57-203ENST00000538392 FUSP35637 526 aaKnown RBP eCLIP12.7□□□□□ -0.387e-7■■■■□ 19.5
C12orf57-203ENST00000538392 PABPC4Q13310 644 aaKnown RBP eCLIP22.78■■□□□ 1.241e-6■■■□□ 18.8
C12orf57-203ENST00000538392 SUB1P53999 127 aaKnown RBP eCLIP14.09□□□□□ -0.156e-7■■■□□ 18.3
C12orf57-203ENST00000538392 SF3A3Q12874 501 aaKnown RBP eCLIP16.54■□□□□ 0.241e-41■■■□□ 18.3
C12orf57-203ENST00000538392 SMNDC1O75940 238 aaKnown RBP eCLIP16.97■□□□□ 0.313e-20■■■□□ 18
C12orf57-203ENST00000538392 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.38■■□□□ 1.178e-14■■■□□ 16.5
C12orf57-203ENST00000538392 NONOQ15233 471 aaKnown RBP eCLIP21.33■■□□□ 1.012e-6■■■□□ 15.4
C12orf57-203ENST00000538392 LARP4Q71RC2 724 aaKnown RBP eCLIP17.22■□□□□ 0.353e-9■■■□□ 15.2
C12orf57-203ENST00000538392 AGGF1Q8N302 714 aaeCLIP18.14■□□□□ 0.498e-6■■■□□ 14.7
C12orf57-203ENST00000538392 RPS3P23396 243 aaKnown RBP eCLIP18.22■□□□□ 0.518e-6■■□□□ 12.6
C12orf57-203ENST00000538392 SND1Q7KZF4 910 aaKnown RBP eCLIP19.46■□□□□ 0.719e-6■■□□□ 12.1
C12orf57-203ENST00000538392 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.24■□□□□ 0.358e-13■■□□□ 11.5
C12orf57-203ENST00000538392 SLBPQ14493 270 aaKnown RBP eCLIP17.76■□□□□ 0.434e-9■■□□□ 11.5
C12orf57-203ENST00000538392 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.4■■□□□ 1.023e-6■□□□□ 11.1
C12orf57-203ENST00000538392 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.67■□□□□ 0.95e-6■□□□□ 10.2
C12orf57-203ENST00000538392 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.48■□□□□ 0.714e-24■□□□□ 9.9
C12orf57-203ENST00000538392 YWHAGP61981 247 aaKnown RBP eCLIP19.8■□□□□ 0.769e-12■□□□□ 9.8
C12orf57-203ENST00000538392 PTBP1P26599 531 aaKnown RBP eCLIP14.26□□□□□ -0.132e-11■□□□□ 9.4
C12orf57-203ENST00000538392 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.16■□□□□ 0.189e-6■□□□□ 9.3
C12orf57-203ENST00000538392 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.76■□□□□ 0.594e-7■□□□□ 9.1
C12orf57-203ENST00000538392 GPKOWQ92917 476 aaPredicted RBP eCLIP21.71■■□□□ 1.079e-19■□□□□ 9
Retrieved 38 of 38 RNA–protein pairs in 701.7 ms