RNA–Protein interactions for RNA: ENST00000537042.5

CORO1B-204, Transcript of coronin 1B, humanhuman

TSL 5

Gene CORO1B, Length 1,954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CORO1B-204ENST00000537042 NISCHQ9Y2I1 1504 aa43.12■■■■■ 4.49
CORO1B-204ENST00000537042 CCDC180Q9P1Z9 1646 aa37.93■■■■□ 3.66
CORO1B-204ENST00000537042 ABCC9O60706 1549 aa36.56■■■■□ 3.44
CORO1B-204ENST00000537042 ZCCHC6Q5VYS8 1495 aaKnown RBP36.04■■■■□ 3.36
CORO1B-204ENST00000537042 DCAF8L2P0C7V8 631 aa35.96■■■■□ 3.35
CORO1B-204ENST00000537042 DCAF1Q9Y4B6 1507 aa35.61■■■■□ 3.29
CORO1B-204ENST00000537042 NACADO15069 1562 aa35.5■■■■□ 3.27
CORO1B-204ENST00000537042 MYO15BQ96JP2 1530 aa35.46■■■■□ 3.27
CORO1B-204ENST00000537042 RB1CC1Q8TDY2 1594 aa35.39■■■■□ 3.26
CORO1B-204ENST00000537042 SCRIBQ14160 1630 aa34.8■■■■□ 3.16
CORO1B-204ENST00000537042 SHROOM4Q9ULL8 1493 aa34.72■■■■□ 3.15
CORO1B-204ENST00000537042 UNC13AQ9UPW8 1703 aa34.7■■■■□ 3.15
CORO1B-204ENST00000537042 PABPN1Q86U42 306 aaKnown RBP eCLIP34.36■■■■□ 3.09
CORO1B-204ENST00000537042 BICRAQ9NZM4 1560 aa34.33■■■■□ 3.09
CORO1B-204ENST00000537042 CECR2Q9BXF3 1484 aa33.59■■■□□ 2.97
CORO1B-204ENST00000537042 EIF4G1Q04637 1599 aaKnown RBP33.35■■■□□ 2.93
CORO1B-204ENST00000537042 BAZ1AQ9NRL2 1556 aaPredicted RBP33.35■■■□□ 2.93
CORO1B-204ENST00000537042 SMARCA4P51532 1647 aa33.3■■■□□ 2.92
CORO1B-204ENST00000537042 MROH2BQ7Z745 1585 aa33.3■■■□□ 2.92
CORO1B-204ENST00000537042 RSF1Q96T23 1441 aaPredicted RBP33.17■■■□□ 2.9
CORO1B-204ENST00000537042 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.88
CORO1B-204ENST00000537042 CC2D2AQ9P2K1 1620 aa33.06■■■□□ 2.88
CORO1B-204ENST00000537042 WIZO95785 1651 aa33.01■■■□□ 2.87
CORO1B-204ENST00000537042 DNAJC5BQ9UF47 199 aa32.94■■■□□ 2.86
CORO1B-204ENST00000537042 ATAD2BQ9ULI0 1458 aa32.94■■■□□ 2.86
CORO1B-204ENST00000537042 PEG3Q9GZU2 1588 aa32.89■■■□□ 2.86
CORO1B-204ENST00000537042 SMARCA2P51531 1590 aa32.89■■■□□ 2.86
CORO1B-204ENST00000537042 NCAPD3P42695 1498 aa32.77■■■□□ 2.84
CORO1B-204ENST00000537042 BAZ1BQ9UIG0 1483 aaKnown RBP32.71■■■□□ 2.83
CORO1B-204ENST00000537042 HMGXB3Q12766 1538 aa32.64■■■□□ 2.82
CORO1B-204ENST00000537042 TOP2AP11388 1531 aaKnown RBP32.6■■■□□ 2.81
CORO1B-204ENST00000537042 CCDC88BA6NC98 1476 aa32.29■■■□□ 2.76
CORO1B-204ENST00000537042 CADPSQ9ULU8 1353 aa31.89■■■□□ 2.7
CORO1B-204ENST00000537042 NESP48681 1621 aa31.87■■■□□ 2.69
CORO1B-204ENST00000537042 CFTRP13569 1480 aa31.84■■■□□ 2.69
CORO1B-204ENST00000537042 LAMC3Q9Y6N6 1575 aa31.78■■■□□ 2.68
CORO1B-204ENST00000537042 PRDM2Q13029 1718 aa31.66■■■□□ 2.66
CORO1B-204ENST00000537042 PDS5BQ9NTI5 1447 aa31.56■■■□□ 2.64
CORO1B-204ENST00000537042 FANCD2Q9BXW9 1451 aa31.53■■■□□ 2.64
CORO1B-204ENST00000537042 KIF21AQ7Z4S6 1674 aa31.49■■■□□ 2.63
CORO1B-204ENST00000537042 ERCC6Q03468 1493 aa31.41■■■□□ 2.62
CORO1B-204ENST00000537042 CEP164Q9UPV0 1460 aa31.41■■■□□ 2.62
CORO1B-204ENST00000537042 ABCC8Q09428 1581 aa31.38■■■□□ 2.61
CORO1B-204ENST00000537042 CHIC1Q5VXU3 224 aa31.35■■■□□ 2.61
CORO1B-204ENST00000537042 WRNQ14191 1432 aaPredicted RBP eCLIP31.25■■■□□ 2.59
CORO1B-204ENST00000537042 URB2Q14146 1524 aaKnown RBP31.19■■■□□ 2.58
CORO1B-204ENST00000537042 MRC2Q9UBG0 1479 aa31.18■■■□□ 2.58
CORO1B-204ENST00000537042 CUX1P39880 1505 aa31.18■■■□□ 2.58
CORO1B-204ENST00000537042 SYNJ1O43426 1573 aa31.15■■■□□ 2.58
CORO1B-204ENST00000537042 TRIM41Q8WV44 630 aa31.13■■■□□ 2.57
CORO1B-204ENST00000537042 TOPBP1Q92547 1522 aa31.12■■■□□ 2.57
CORO1B-204ENST00000537042 THOC2Q8NI27 1593 aaKnown RBP31.12■■■□□ 2.57
CORO1B-204ENST00000537042 DNMBPQ6XZF7 1577 aa31.11■■■□□ 2.57
CORO1B-204ENST00000537042 TOP2BQ02880 1626 aa31.08■■■□□ 2.57
CORO1B-204ENST00000537042 BIVM-ERCC5R4GMW8 1640 aa31.06■■■□□ 2.56
CORO1B-204ENST00000537042 WDR62O43379 1518 aa31.04■■■□□ 2.56
CORO1B-204ENST00000537042 FGD5Q6ZNL6 1462 aa30.95■■■□□ 2.54
CORO1B-204ENST00000537042 POLA1P09884 1462 aaPredicted RBP30.9■■■□□ 2.54
CORO1B-204ENST00000537042 SOGA1O94964 1423 aa30.82■■■□□ 2.52
CORO1B-204ENST00000537042 RAD54L2Q9Y4B4 1467 aa30.82■■■□□ 2.52
CORO1B-204ENST00000537042 CUX2O14529 1486 aa30.81■■■□□ 2.52
CORO1B-204ENST00000537042 TARBP1Q13395 1621 aaKnown RBP30.71■■■□□ 2.51
CORO1B-204ENST00000537042 IFT140Q96RY7 1462 aa30.69■■■□□ 2.5
CORO1B-204ENST00000537042 ABCA10Q8WWZ4 1543 aa30.64■■■□□ 2.5
CORO1B-204ENST00000537042 WDR97A6NE52 1622 aa30.61■■■□□ 2.49
CORO1B-204ENST00000537042 TDRD9Q8NDG6 1382 aaKnown RBP30.6■■■□□ 2.49
CORO1B-204ENST00000537042 RUSC2Q8N2Y8 1516 aa30.59■■■□□ 2.49
CORO1B-204ENST00000537042 ZNF608Q9ULD9 1512 aaPredicted RBP30.58■■■□□ 2.49
CORO1B-204ENST00000537042 FAM9AQ8IZU1 332 aaPredicted RBP30.57■■■□□ 2.48
CORO1B-204ENST00000537042 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
CORO1B-204ENST00000537042 AQRO60306 1485 aaKnown RBP eCLIP30.52■■■□□ 2.489e-7■■■■□ 25.3
CORO1B-204ENST00000537042 GAPVD1Q14C86 1478 aa30.46■■■□□ 2.47
CORO1B-204ENST00000537042 ABCA5Q8WWZ7 1642 aa30.45■■■□□ 2.47
CORO1B-204ENST00000537042 EIF4G3O43432 1585 aaKnown RBP30.44■■■□□ 2.46
CORO1B-204ENST00000537042 EEA1Q15075 1411 aa30.38■■■□□ 2.45
CORO1B-204ENST00000537042 CSRNP3Q8WYN3 585 aa30.37■■■□□ 2.45
CORO1B-204ENST00000537042 PBRM1Q86U86 1689 aa30.34■■■□□ 2.45
CORO1B-204ENST00000537042 IGF1RP08069 1367 aa30.34■■■□□ 2.45
CORO1B-204ENST00000537042 GRIN2BQ13224 1484 aa30.32■■■□□ 2.44
CORO1B-204ENST00000537042 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
CORO1B-204ENST00000537042 SNAPC4Q5SXM2 1469 aa30.21■■■□□ 2.43
CORO1B-204ENST00000537042 EHMT2Q96KQ7 1210 aa30.19■■■□□ 2.42
CORO1B-204ENST00000537042 CARMIL1Q5VZK9 1371 aa30.18■■■□□ 2.42
CORO1B-204ENST00000537042 LOC105371045A0A1W2PR82 267 aa30.17■■■□□ 2.42
CORO1B-204ENST00000537042 CUL7Q14999 1698 aa30.15■■■□□ 2.42
CORO1B-204ENST00000537042 MAGI1Q96QZ7 1491 aaPredicted RBP30.13■■■□□ 2.41
CORO1B-204ENST00000537042 PRXQ9BXM0 1461 aa30.12■■■□□ 2.41
CORO1B-204ENST00000537042 ADAMTS12P58397 1594 aa30.11■■■□□ 2.41
CORO1B-204ENST00000537042 FHAD1B1AJZ9 1412 aa30.1■■■□□ 2.41
CORO1B-204ENST00000537042 FBLN2P98095 1184 aa30.09■■■□□ 2.41
CORO1B-204ENST00000537042 CHMP7Q8WUX9 453 aaPredicted RBP30.06■■■□□ 2.4
CORO1B-204ENST00000537042 RAPGEF2Q9Y4G8 1499 aa30.06■■■□□ 2.4
CORO1B-204ENST00000537042 KIF21BO75037 1637 aa30.04■■■□□ 2.4
CORO1B-204ENST00000537042 SYNJ2O15056 1496 aa30.03■■■□□ 2.4
CORO1B-204ENST00000537042 CHD1O14646 1710 aa29.97■■■□□ 2.39
CORO1B-204ENST00000537042 GOLGA3Q08378 1498 aa29.95■■■□□ 2.38
CORO1B-204ENST00000537042 GRIN2AQ12879 1464 aa29.94■■■□□ 2.38
CORO1B-204ENST00000537042 UBTFP17480 764 aaKnown RBP29.94■■■□□ 2.38
CORO1B-204ENST00000537042 CEP170Q5SW79 1584 aa29.78■■■□□ 2.36
CORO1B-204ENST00000537042 NUP160Q12769 1436 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 235.7 ms