RNA–Protein interactions for RNA: ENST00000536949.1

AC019209.3-201, humanhuman

TSL 3 BASIC

Gene AC019209.3, Length 772 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC019209.3-201ENST00000536949 AEBP2Q6ZN18 517 aaPredicted RBP25.46■■□□□ 1.67
AC019209.3-201ENST00000536949 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
AC019209.3-201ENST00000536949 SENP3Q9H4L4 574 aaPredicted RBP21.77■■□□□ 1.08
AC019209.3-201ENST00000536949 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
AC019209.3-201ENST00000536949 FOXD1Q16676 465 aa20.28■□□□□ 0.84
AC019209.3-201ENST00000536949 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
AC019209.3-201ENST00000536949 MSH5O43196 834 aa19.06■□□□□ 0.64
AC019209.3-201ENST00000536949 PIAS4Q8N2W9 510 aaPredicted RBP18.92■□□□□ 0.62
AC019209.3-201ENST00000536949 PPP6R1Q9UPN7 881 aa18.87■□□□□ 0.61
AC019209.3-201ENST00000536949 ADRA2BP18089 450 aa18.79■□□□□ 0.6
AC019209.3-201ENST00000536949 POTEDQ86YR6 584 aa18.78■□□□□ 0.6
AC019209.3-201ENST00000536949 MAPK8IP2Q13387 824 aaPredicted RBP17.3■□□□□ 0.36
AC019209.3-201ENST00000536949 SCAF1Q9H7N4 1312 aaKnown RBP17.24■□□□□ 0.35
AC019209.3-201ENST00000536949 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
AC019209.3-201ENST00000536949 NISCHQ9Y2I1 1504 aa16.88■□□□□ 0.29
AC019209.3-201ENST00000536949 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
AC019209.3-201ENST00000536949 HOXD11P31277 338 aaPredicted RBP16.57■□□□□ 0.24
AC019209.3-201ENST00000536949 CNKSR2Q8WXI2 1034 aa16.53■□□□□ 0.24
AC019209.3-201ENST00000536949 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
AC019209.3-201ENST00000536949 CACNB1Q02641 598 aaPredicted RBP16.41■□□□□ 0.22
AC019209.3-201ENST00000536949 RNF216Q9NWF9 866 aaPredicted RBP16.41■□□□□ 0.22
AC019209.3-201ENST00000536949 RNF39Q9H2S5 420 aa16.24■□□□□ 0.19
AC019209.3-201ENST00000536949 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
AC019209.3-201ENST00000536949 DNAJC5BQ9UF47 199 aa16.06■□□□□ 0.16
AC019209.3-201ENST00000536949 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
AC019209.3-201ENST00000536949 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
AC019209.3-201ENST00000536949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.76■□□□□ 0.11
AC019209.3-201ENST00000536949 KCNA4P22459 653 aa15.45■□□□□ 0.06
AC019209.3-201ENST00000536949 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
AC019209.3-201ENST00000536949 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
AC019209.3-201ENST00000536949 CAPN15O75808 1086 aa15.2■□□□□ 0.02
AC019209.3-201ENST00000536949 SLC4A2P04920 1241 aa15.2■□□□□ 0.02
AC019209.3-201ENST00000536949 DSG3P32926 999 aa15.16■□□□□ 0.02
AC019209.3-201ENST00000536949 APLP2Q06481 763 aa15.01□□□□□ -0.01
AC019209.3-201ENST00000536949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
AC019209.3-201ENST00000536949 HNRNPUL2Q1KMD3 747 aaKnown RBP14.97□□□□□ -0.01
AC019209.3-201ENST00000536949 TRHP20396 242 aaPredicted RBP14.93□□□□□ -0.02
AC019209.3-201ENST00000536949 ZNF219Q9P2Y4 722 aaPredicted RBP14.92□□□□□ -0.02
AC019209.3-201ENST00000536949 SAMD1Q6SPF0 538 aaPredicted RBP14.87□□□□□ -0.03
AC019209.3-201ENST00000536949 ABCB7O75027 752 aa14.83□□□□□ -0.04
AC019209.3-201ENST00000536949 CCDC180Q9P1Z9 1646 aa14.71□□□□□ -0.05
AC019209.3-201ENST00000536949 MYCNP04198 464 aaPredicted RBP14.7□□□□□ -0.06
AC019209.3-201ENST00000536949 POTEHQ6S545 545 aa14.7□□□□□ -0.06
AC019209.3-201ENST00000536949 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
AC019209.3-201ENST00000536949 POLA2Q14181 598 aa14.51□□□□□ -0.09
AC019209.3-201ENST00000536949 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
AC019209.3-201ENST00000536949 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
AC019209.3-201ENST00000536949 ATF5Q9Y2D1 282 aaPredicted RBP14.35□□□□□ -0.11
AC019209.3-201ENST00000536949 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
AC019209.3-201ENST00000536949 ZBTB22O15209 634 aa14.2□□□□□ -0.14
AC019209.3-201ENST00000536949 CHRDL2Q6WN34 429 aa14.2□□□□□ -0.14
AC019209.3-201ENST00000536949 ZCCHC6Q5VYS8 1495 aaKnown RBP14.16□□□□□ -0.14
AC019209.3-201ENST00000536949 AKT1S1Q96B36 256 aa14.13□□□□□ -0.15
AC019209.3-201ENST00000536949 ATXN8OSP0DMR3 200 aa14.08□□□□□ -0.16
AC019209.3-201ENST00000536949 OSCARQ8IYS5 282 aa14.04□□□□□ -0.16
AC019209.3-201ENST00000536949 ABCC9O60706 1549 aa14□□□□□ -0.17
AC019209.3-201ENST00000536949 REM2Q8IYK8 340 aaPredicted RBP13.98□□□□□ -0.17
AC019209.3-201ENST00000536949 DCAF1Q9Y4B6 1507 aa13.94□□□□□ -0.18
AC019209.3-201ENST00000536949 DCAF8L2P0C7V8 631 aa13.9□□□□□ -0.18
AC019209.3-201ENST00000536949 PIP4P2Q8N4L2 257 aa13.84□□□□□ -0.19
AC019209.3-201ENST00000536949 PITPNM1O00562 1244 aa13.82□□□□□ -0.2
AC019209.3-201ENST00000536949 FBLN2P98095 1184 aa13.82□□□□□ -0.2
AC019209.3-201ENST00000536949 SPDYE2BA6NHP3 402 aa13.78□□□□□ -0.2
AC019209.3-201ENST00000536949 SPDYE6P0CI01 402 aa13.78□□□□□ -0.2
AC019209.3-201ENST00000536949 SPDYE2Q495Y8 402 aa13.78□□□□□ -0.2
AC019209.3-201ENST00000536949 MYO15BQ96JP2 1530 aa13.78□□□□□ -0.2
AC019209.3-201ENST00000536949 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
AC019209.3-201ENST00000536949 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
AC019209.3-201ENST00000536949 NACADO15069 1562 aa13.71□□□□□ -0.21
AC019209.3-201ENST00000536949 SHROOM4Q9ULL8 1493 aa13.71□□□□□ -0.21
AC019209.3-201ENST00000536949 MKRN4PQ13434 485 aaPredicted RBP13.69□□□□□ -0.22
AC019209.3-201ENST00000536949 HAX1O00165 279 aa13.61□□□□□ -0.23
AC019209.3-201ENST00000536949 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
AC019209.3-201ENST00000536949 ZNF692Q9BU19 519 aaPredicted RBP13.59□□□□□ -0.23
AC019209.3-201ENST00000536949 SSUH2Q9Y2M2 353 aa13.58□□□□□ -0.24
AC019209.3-201ENST00000536949 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
AC019209.3-201ENST00000536949 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
AC019209.3-201ENST00000536949 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
AC019209.3-201ENST00000536949 PRKAR2AP13861 404 aaKnown RBP13.46□□□□□ -0.25
AC019209.3-201ENST00000536949 CSRNP3Q8WYN3 585 aa13.45□□□□□ -0.26
AC019209.3-201ENST00000536949 EVX2Q03828 476 aa13.43□□□□□ -0.26
AC019209.3-201ENST00000536949 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
AC019209.3-201ENST00000536949 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
AC019209.3-201ENST00000536949 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
AC019209.3-201ENST00000536949 PRR29P0C7W0 189 aa13.3□□□□□ -0.28
AC019209.3-201ENST00000536949 BICRAQ9NZM4 1560 aa13.29□□□□□ -0.28
AC019209.3-201ENST00000536949 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
AC019209.3-201ENST00000536949 EHMT2Q96KQ7 1210 aa13.17□□□□□ -0.3
AC019209.3-201ENST00000536949 CECR2Q9BXF3 1484 aa13.16□□□□□ -0.3
AC019209.3-201ENST00000536949 GABBR2O75899 941 aa13.14□□□□□ -0.31
AC019209.3-201ENST00000536949 SUPT5HO00267 1087 aaKnown RBP13.13□□□□□ -0.31
AC019209.3-201ENST00000536949 FARP1Q9Y4F1 1045 aaPredicted RBP13.09□□□□□ -0.31
AC019209.3-201ENST00000536949 RSF1Q96T23 1441 aaPredicted RBP13.08□□□□□ -0.32
AC019209.3-201ENST00000536949 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
AC019209.3-201ENST00000536949 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
AC019209.3-201ENST00000536949 STAG3Q9UJ98 1225 aa13.02□□□□□ -0.33
AC019209.3-201ENST00000536949 SPDYE4A6NLX3 237 aa12.99□□□□□ -0.33
AC019209.3-201ENST00000536949 BAZ1AQ9NRL2 1556 aaPredicted RBP12.98□□□□□ -0.33
AC019209.3-201ENST00000536949 SMARCA4P51532 1647 aa12.98□□□□□ -0.33
AC019209.3-201ENST00000536949 WIZO95785 1651 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms