RNA–Protein interactions for RNA: ENST00000536911.1

SOX5-209, Transcript of SRY-box 5, humanhuman

TSL 3

Gene SOX5, Length 855 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-209ENST00000536911 PTBP1P26599 531 aaKnown RBP eCLIP7.72□□□□□ -1.175e-10■■■■□ 26.4
SOX5-209ENST00000536911 RPS3P23396 243 aaKnown RBP eCLIP9.13□□□□□ -0.955e-10■■■■■ 68.3
SOX5-209ENST00000536911 GTF2F1P35269 517 aaKnown RBP eCLIP9.62□□□□□ -0.871e-8■■■□□ 17.6
SOX5-209ENST00000536911 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.5□□□□□ -1.051e-8■□□□□ 9.3
SOX5-209ENST00000536911 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.95□□□□□ -0.822e-8■□□□□ 8.3
SOX5-209ENST00000536911 AGGF1Q8N302 714 aaeCLIP9.15□□□□□ -0.949e-8■□□□□ 8.4
SOX5-209ENST00000536911 U2AF2P26368 475 aaKnown RBP eCLIP10.52□□□□□ -0.731e-7■■■■■ 31.9
SOX5-209ENST00000536911 CSTF2P33240 577 aaKnown RBP eCLIP8.87□□□□□ -0.992e-7■■■■□ 22.3
SOX5-209ENST00000536911 TIAL1Q01085 375 aaKnown RBP eCLIP8.98□□□□□ -0.973e-7■■■■□ 25.7
SOX5-209ENST00000536911 QKIQ96PU8 341 aaKnown RBP eCLIP9.44□□□□□ -0.94e-7■■■■□ 21
SOX5-209ENST00000536911 U2AF1Q01081 240 aaKnown RBP eCLIP12.26□□□□□ -0.454e-7■■□□□ 12.5
SOX5-209ENST00000536911 PCBP2Q15366 365 aaKnown RBP eCLIP8.93□□□□□ -0.988e-7■■■■□ 26
SOX5-209ENST00000536911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.62□□□□□ -0.398e-7■□□□□ 8.8
SOX5-209ENST00000536911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.2■□□□□ 0.348e-7■■■□□ 15.7
SOX5-209ENST00000536911 MATR3P43243 847 aaKnown RBP eCLIP10.14□□□□□ -0.799e-7■■■□□ 17.9
SOX5-209ENST00000536911 PPIGQ13427 754 aaKnown RBP eCLIP10.07□□□□□ -0.81e-6■□□□□ 8.9
SOX5-209ENST00000536911 HNRNPLP14866 589 aaKnown RBP eCLIP9.36□□□□□ -0.911e-6■■■■□ 21.9
SOX5-209ENST00000536911 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.53□□□□□ -1.22e-6■■■■□ 23.4
SOX5-209ENST00000536911 SFPQP23246 707 aaKnown RBP eCLIP10.17□□□□□ -0.782e-6■■□□□ 13.5
SOX5-209ENST00000536911 KHSRPQ92945 711 aaKnown RBP eCLIP12.01□□□□□ -0.492e-6■■■□□ 17.6
SOX5-209ENST00000536911 HNRNPCP07910 306 aaKnown RBP eCLIP7.2□□□□□ -1.262e-6■■□□□ 13.7
SOX5-209ENST00000536911 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.54□□□□□ -0.43e-6■■□□□ 13.5
SOX5-209ENST00000536911 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.86□□□□□ -0.834e-6■■■■■ 72.1
Retrieved 23 of 23 RNA–protein pairs in 5.3 ms