RNA–Protein interactions for RNA: ENST00000536821.5

TMED3-203, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2 BASIC

Gene TMED3, Length 2,265 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-203ENST00000536821 NISCHQ9Y2I1 1504 aa37.68■■■■□ 3.62
TMED3-203ENST00000536821 CCDC180Q9P1Z9 1646 aa32.7■■■□□ 2.83
TMED3-203ENST00000536821 ZCCHC6Q5VYS8 1495 aaKnown RBP31.69■■■□□ 2.66
TMED3-203ENST00000536821 DCAF8L2P0C7V8 631 aa31.17■■■□□ 2.58
TMED3-203ENST00000536821 DCAF1Q9Y4B6 1507 aa31.1■■■□□ 2.57
TMED3-203ENST00000536821 SHROOM4Q9ULL8 1493 aa31.02■■■□□ 2.56
TMED3-203ENST00000536821 ABCC9O60706 1549 aa30.82■■■□□ 2.52
TMED3-203ENST00000536821 MYO15BQ96JP2 1530 aa30.63■■■□□ 2.49
TMED3-203ENST00000536821 NACADO15069 1562 aa30.42■■■□□ 2.46
TMED3-203ENST00000536821 SCRIBQ14160 1630 aa30.2■■■□□ 2.42
TMED3-203ENST00000536821 RB1CC1Q8TDY2 1594 aa30.12■■■□□ 2.41
TMED3-203ENST00000536821 SUPT5HO00267 1087 aaKnown RBP29.96■■■□□ 2.39
TMED3-203ENST00000536821 UNC13AQ9UPW8 1703 aa29.54■■■□□ 2.32
TMED3-203ENST00000536821 RSF1Q96T23 1441 aaPredicted RBP29.34■■■□□ 2.29
TMED3-203ENST00000536821 CECR2Q9BXF3 1484 aa29.3■■■□□ 2.28
TMED3-203ENST00000536821 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
TMED3-203ENST00000536821 MROH2BQ7Z745 1585 aa29.15■■■□□ 2.26
TMED3-203ENST00000536821 PABPN1Q86U42 306 aaKnown RBP eCLIP29.14■■■□□ 2.26
TMED3-203ENST00000536821 BAZ1AQ9NRL2 1556 aaPredicted RBP29.07■■■□□ 2.24
TMED3-203ENST00000536821 WIZO95785 1651 aa28.93■■■□□ 2.22
TMED3-203ENST00000536821 SMARCA4P51532 1647 aa28.92■■■□□ 2.22
TMED3-203ENST00000536821 CHIC1Q5VXU3 224 aa28.76■■■□□ 2.19
TMED3-203ENST00000536821 TOP2AP11388 1531 aaKnown RBP28.6■■■□□ 2.17
TMED3-203ENST00000536821 PEG3Q9GZU2 1588 aa28.51■■■□□ 2.16
TMED3-203ENST00000536821 ATAD2BQ9ULI0 1458 aa28.39■■■□□ 2.14
TMED3-203ENST00000536821 SMARCA2P51531 1590 aa28.36■■■□□ 2.13
TMED3-203ENST00000536821 CCDC88BA6NC98 1476 aa28.35■■■□□ 2.13
TMED3-203ENST00000536821 EIF4G1Q04637 1599 aaKnown RBP28.33■■■□□ 2.13
TMED3-203ENST00000536821 BAZ1BQ9UIG0 1483 aaKnown RBP28.26■■■□□ 2.11
TMED3-203ENST00000536821 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
TMED3-203ENST00000536821 NCAPD3P42695 1498 aa28.08■■■□□ 2.09
TMED3-203ENST00000536821 HMGXB3Q12766 1538 aa28.05■■■□□ 2.08
TMED3-203ENST00000536821 HRCP23327 699 aa27.95■■■□□ 2.06
TMED3-203ENST00000536821 CC2D2AQ9P2K1 1620 aa27.86■■■□□ 2.05
TMED3-203ENST00000536821 ABCC8Q09428 1581 aa27.85■■■□□ 2.05
TMED3-203ENST00000536821 LOC105371045A0A1W2PR82 267 aa27.71■■■□□ 2.03
TMED3-203ENST00000536821 FAM9AQ8IZU1 332 aaPredicted RBP27.66■■■□□ 2.02
TMED3-203ENST00000536821 WRNQ14191 1432 aaPredicted RBP eCLIP27.61■■■□□ 2.01
TMED3-203ENST00000536821 CFTRP13569 1480 aa27.54■■■□□ 2
TMED3-203ENST00000536821 SYNJ1O43426 1573 aa27.49■■□□□ 1.99
TMED3-203ENST00000536821 CADPSQ9ULU8 1353 aa27.41■■□□□ 1.98
TMED3-203ENST00000536821 PRDM2Q13029 1718 aa27.39■■□□□ 1.98
TMED3-203ENST00000536821 SOGA1O94964 1423 aa27.37■■□□□ 1.97
TMED3-203ENST00000536821 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
TMED3-203ENST00000536821 EHMT2Q96KQ7 1210 aa27.32■■□□□ 1.96
TMED3-203ENST00000536821 EEA1Q15075 1411 aa27.31■■□□□ 1.96
TMED3-203ENST00000536821 BIVM-ERCC5R4GMW8 1640 aa27.3■■□□□ 1.96
TMED3-203ENST00000536821 RUSC2Q8N2Y8 1516 aa27.27■■□□□ 1.96
TMED3-203ENST00000536821 PCGF6Q9BYE7 350 aa27.27■■□□□ 1.96
TMED3-203ENST00000536821 CUX1P39880 1505 aa27.23■■□□□ 1.95
TMED3-203ENST00000536821 CSRNP3Q8WYN3 585 aa27.19■■□□□ 1.94
TMED3-203ENST00000536821 DNAJC5BQ9UF47 199 aa27.15■■□□□ 1.94
TMED3-203ENST00000536821 NESP48681 1621 aa27.13■■□□□ 1.93
TMED3-203ENST00000536821 FANCD2Q9BXW9 1451 aa27.12■■□□□ 1.93
TMED3-203ENST00000536821 LAMC3Q9Y6N6 1575 aa27.09■■□□□ 1.93
TMED3-203ENST00000536821 GOLGA3Q08378 1498 aa26.97■■□□□ 1.91
TMED3-203ENST00000536821 PPARGC1BQ86YN6 1023 aaKnown RBP26.96■■□□□ 1.91
TMED3-203ENST00000536821 CEP164Q9UPV0 1460 aa26.95■■□□□ 1.9
TMED3-203ENST00000536821 KIF21BO75037 1637 aa26.95■■□□□ 1.9
TMED3-203ENST00000536821 TNIKQ9UKE5 1360 aa26.94■■□□□ 1.9
TMED3-203ENST00000536821 FGD5Q6ZNL6 1462 aa26.91■■□□□ 1.9
TMED3-203ENST00000536821 UBTFP17480 764 aaKnown RBP26.9■■□□□ 1.9
TMED3-203ENST00000536821 DNMBPQ6XZF7 1577 aa26.89■■□□□ 1.9
TMED3-203ENST00000536821 PDS5BQ9NTI5 1447 aa26.89■■□□□ 1.9
TMED3-203ENST00000536821 KIF27Q86VH2 1401 aa26.89■■□□□ 1.89
TMED3-203ENST00000536821 TOPBP1Q92547 1522 aa26.84■■□□□ 1.89
TMED3-203ENST00000536821 CEP162Q5TB80 1403 aa26.83■■□□□ 1.89
TMED3-203ENST00000536821 TRIM26Q12899 539 aaPredicted RBP26.81■■□□□ 1.88
TMED3-203ENST00000536821 RAPGEF2Q9Y4G8 1499 aa26.8■■□□□ 1.88
TMED3-203ENST00000536821 CUX2O14529 1486 aa26.79■■□□□ 1.88
TMED3-203ENST00000536821 KIF21AQ7Z4S6 1674 aa26.78■■□□□ 1.88
TMED3-203ENST00000536821 URB2Q14146 1524 aaKnown RBP26.77■■□□□ 1.88
TMED3-203ENST00000536821 PRXQ9BXM0 1461 aa26.76■■□□□ 1.87
TMED3-203ENST00000536821 POLA1P09884 1462 aaPredicted RBP26.74■■□□□ 1.87
TMED3-203ENST00000536821 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
TMED3-203ENST00000536821 PELP1Q8IZL8 1130 aaKnown RBP26.71■■□□□ 1.87
TMED3-203ENST00000536821 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
TMED3-203ENST00000536821 ZEB1P37275 1124 aaPredicted RBP26.65■■□□□ 1.86
TMED3-203ENST00000536821 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
TMED3-203ENST00000536821 IGF1RP08069 1367 aa26.63■■□□□ 1.85
TMED3-203ENST00000536821 CLIP1P30622 1438 aa26.57■■□□□ 1.84
TMED3-203ENST00000536821 MRC2Q9UBG0 1479 aa26.53■■□□□ 1.84
TMED3-203ENST00000536821 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
TMED3-203ENST00000536821 CARMIL1Q5VZK9 1371 aa26.51■■□□□ 1.84
TMED3-203ENST00000536821 RANGAP1P46060 587 aaPredicted RBP26.45■■□□□ 1.83
TMED3-203ENST00000536821 TARBP1Q13395 1621 aaKnown RBP26.41■■□□□ 1.82
TMED3-203ENST00000536821 TDRD9Q8NDG6 1382 aaKnown RBP26.41■■□□□ 1.82
TMED3-203ENST00000536821 ABCA5Q8WWZ7 1642 aa26.41■■□□□ 1.82
TMED3-203ENST00000536821 ERCC6Q03468 1493 aa26.39■■□□□ 1.82
TMED3-203ENST00000536821 CUL7Q14999 1698 aa26.38■■□□□ 1.81
TMED3-203ENST00000536821 WDR62O43379 1518 aa26.37■■□□□ 1.81
TMED3-203ENST00000536821 GAPVD1Q14C86 1478 aa26.36■■□□□ 1.81
TMED3-203ENST00000536821 VPS8Q8N3P4 1428 aa26.35■■□□□ 1.81
TMED3-203ENST00000536821 ARAP1Q96P48 1450 aa26.27■■□□□ 1.8
TMED3-203ENST00000536821 THOC2Q8NI27 1593 aaKnown RBP26.25■■□□□ 1.79
TMED3-203ENST00000536821 IFT140Q96RY7 1462 aa26.25■■□□□ 1.79
TMED3-203ENST00000536821 ARHGAP35Q9NRY4 1499 aa26.22■■□□□ 1.79
TMED3-203ENST00000536821 AQRO60306 1485 aaKnown RBP eCLIP26.19■■□□□ 1.78
TMED3-203ENST00000536821 PBRM1Q86U86 1689 aa26.19■■□□□ 1.78
TMED3-203ENST00000536821 TTBK1Q5TCY1 1321 aaPredicted RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms